Contig 004857:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS059E07Sequence619004857 (2)ref|XP_009772834.1|3e-43PREDICTED: B3 domain-containing transcription repressor VAL1-like [Nicotiana sy
JMFS119G05Sequence627004857 (2)ref|XP_009772834.1|4e-44PREDICTED: B3 domain-containing transcription repressor VAL1-like [Nicotiana sy

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS059E07+ TGTTTTGGGATTGAAAGAGTTGCN
JMFS119G05+ CCATGTTTTGGGATTGAAAGAGTTGCC
                      ____________________________________________________________
consensus CCATGTTTTGGGATTGAAAGAGTTGCC
 
. : . : . : . : . : . :
JMFS059E07+ CAGGCTTGTGTGCCTCTATAGTCCTACTTAAGTGCAGAAGCCTTCCCTTGTCAAAATCAT
JMFS119G05+ CAGGCTTGTGTGCCTCTATAGTCCTACTTAAGTGCAGAAGCCTTCCCTTGTCAAAATCAT
                      ____________________________________________________________
consensus CAGGCTTGTGTGCCTCTATAGTCCTACTTAAGTGCAGAAGCCTTCCCTTGTCAAAATCAT
 
. : . : . : . : . : . :
JMFS059E07+ TTTCATCCATTCTATTTTCAGTATCAACGCGCTGTGTATCTCCAATTTTGTTCATAGTCA
JMFS119G05+ TTTCATCCATTCTATTTTCAGTATCAACGCGCTGTGTATCTCCAATTTTGTTCATAGTCA
                      ____________________________________________________________
consensus TTTCATCCATTCTATTTTCAGTATCAACGCGCTGTGTATCTCCAATTTTGTTCATAGTCA
 
. : . : . : . : . : . :
JMFS059E07+ AGGTTCCATTAGGTATATCGTCATTAGGTGTCTGTATCGGTCTCAAGGCATGCCCTCCCA
JMFS119G05+ AGGTTCCATTAGGTATATCGTCATTAGGTGTCTGTATCGGTCTCAAGGCATGCCCTCCCA
                      ____________________________________________________________
consensus AGGTTCCATTAGGTATATCGTCATTAGGTGTCTGTATCGGTCTCAAGGCATGCCCTCCCA
 
. : . : . : . : . : . :
JMFS059E07+ AACGCCTTACACAGCTCATACACCCTATGCCTCCAAAATCCATGTAGTCGTACAAATATC
JMFS119G05+ AACGCCTTACACAGCTCATACACCCTATGCCTCCAAAATCCATGTAGTCGTACAAATATC
                      ____________________________________________________________
consensus AACGCCTTACACAGCTCATACACCCTATGCCTCCAAAATCCATGTAGTCGTACAAATATC
 
. : . : . : . : . : . :
JMFS059E07+ TTGAAGCAATGCACCCACAATGAATACGCTTTCCACACATTCTGCATTCCCTCCAACCAG
JMFS119G05+ TTGAAGCAATGCACCCACAATGAATACGCTTTCCACACATTCTGCATTCCCTCCAACCAG
                      ____________________________________________________________
consensus TTGAAGCAATGCACCCACAATGAATACGCTTTCCACACATTCTGCATTCCCTCCAACCAG
 
. : . : . : . : . : . :
JMFS059E07+ AATCGTTCAGGTGAAACATGTCACAGAAAGCAAAATGTTCATAAGCAGATCTGCATCACA
JMFS119G05+ AATCGTTCAGGTGAAACATGTCACAGAAAGCAAAATGTTCATAAGCAGATCTGCATCACA
                      ____________________________________________________________
consensus AATCGTTCAGGTGAAACATGTCACAGAAAGCAAAATGTTCATAAGCAGATCTGCATCACA
 
. : . : . : . : . : . :
JMFS059E07+ CACGAGGCCATCGCCATGCCAGCAAAACAAAAAGCAGAACTTAGCAACATAAACTAAAGA
JMFS119G05+ CACGAGGCCATCGCCATGCCAGCAAAACAAAAAGCAGAACTTAGCAACATAAACTAAAGA
                      ____________________________________________________________
consensus CACGAGGCCATCGCCATGCCAGCAAAACAAAAAGCAGAACTTAGCAACATAAACTAAAGA
 
. : . : . : . : . : . :
JMFS059E07+ AACTCACAACAGCTAATGAGAAACACCGAACACCAGAATGCTTAATAGAAATTGAATAAG
JMFS119G05+ AACTCACAACAGCTAATGAGAAACACCGAACACCAGAATGCTTAATAGAAATTGAATAAG
                      ____________________________________________________________
consensus AACTCACAACAGCTAATGAGAAACACCGAACACCAGAATGCTTAATAGAAATTGAATAAG
 
. : . : . : . : . : . :
JMFS059E07+ TTCACTTATTCATGACCAGAGAGTATGATTTTGCAAATTCACTTATGATTTGAGGATGCC
JMFS119G05+ TTCACTTATTCATGACCAGAGAGTATGATTTTGCAAATTCACTTATGATTTGAGGATGCC
                      ____________________________________________________________
consensus TTCACTTATTCATGACCAGAGAGTATGATTTTGCAAATTCACTTATGATTTGAGGATGCC
 
. : . : . : . : . : . :
JMFS059E07+ ATTATTGCCATGTCTATGAAGCTTGACTTTAGTATCAACTATTTTTTACTTTG
JMFS119G05+ ATTATTGCCATGTCTATGAAGCTTGACTTTAGTATCAACTATTTTTTACTTTGGTACTAA
                      ____________________________________________________________
consensus ATTATTGCCATGTCTATGAAGCTTGACTTTAGTATCAACTATTTTTTACTTTGGTACTAA