Contig 004855:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF049N21+                                                                   TTAA
                      ____________________________________________________________
consensus                                                                     TTAA
 
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JMSF049N21+           TAGGTTTTGTGGTTAAATTCCCTTCAAAGGTCTTGTGAATAGTCACACGATACACATTTG
                      ____________________________________________________________
consensus             TAGGTTTTGTGGTTAAATTCCCTTCAAAGGTCTTGTGAATAGTCACACGATACACATTTG
 
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JMSF049N21+           TGTCATCAACAAACCAAATTATCTGATTGCTGAATATTTCTCCATAGTTCTGGGATGATA
                      ____________________________________________________________
consensus             TGTCATCAACAAACCAAATTATCTGATTGCTGAATATTTCTCCATAGTTCTGGGATGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049N21+           GATATGGCTCTGTAGGTTCTGAAGAATATAACTGCAACCCTTTCCTTATCCGTTCCCTCA
                      ____________________________________________________________
consensus             GATATGGCTCTGTAGGTTCTGAAGAATATAACTGCAACCCTTTCCTTATCCGTTCCCTCA
 
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JMSF049N21+           GAACATATAGTGCAGGATTTGACTTCATAATCTTGTTCATCGCTTGAGCCAATAATGGCT
                      ____________________________________________________________
consensus             GAACATATAGTGCAGGATTTGACTTCATAATCTTGTTCATCGCTTGAGCCAATAATGGCT
 
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JMSF049N21+           TTGATCCAGGGAACCAGTTTCCAAATGCAGAATGCAAGTTGTAAGCAAGGTCAAGTCCAA
                      ____________________________________________________________
consensus             TTGATCCAGGGAACCAGTTTCCAAATGCAGAATGCAAGTTGTAAGCAAGGTCAAGTCCAA
 
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JMSF049N21+           TCATTACACCAGTTGGTGATGGATAAATAGACATATTGTCTGTTGTGTAATCCATAAACT
                      ____________________________________________________________
consensus             TCATTACACCAGTTGGTGATGGATAAATAGACATATTGTCTGTTGTGTAATCCATAAACT
 
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JMSF049N21+           TTGCCCGGGTGTATCGTTCAATGTCGTGAGAATCATAGTCACCCCATCTAAGCTGCACAT
JMFS122A03+                                                              GCTGCACAT
                      ____________________________________________________________
consensus             TTGCCCGGGTGTATCGTTCAATGTCGTGAGAATCATAGTCACCCCATCTAAGCTGCACAT
 
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JMSF049N21+           CAATCCAGTATTTATTACTTGCCTTTTGGTCAAAGACATCCTTTGATTCAGCCACAAGAC
JMFS122A03+           CAATCCAGTATTTATTACTTGCCTTTTGGTCAAAGACATCCTTTGATTCAGCCACAAGAC
                      ____________________________________________________________
consensus             CAATCCAGTATTTATTACTTGCCTTTTGGTCAAAGACATCCTTTGATTCAGCCACAAGAC
 
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JMSF049N21+           TAGGTTTTGACATTGGCCACCTATGTGCAGCAAATAGAAGAATGTCAGCACAAGAGCTAT
JMFS122A03+           TAGGTTTTGACATTGGCCACCTATGTGCAGCAAATAGAAGAATGTCAGCACAAGAGCTAT
JMFS124G07+            AGGTTTTGACATTGGCCACCTATGTGCAGCAAATAGAAGAATGTCAGCACAAGAGCTAT
JMFS098D11+                          GCCACCTATGTGCAGCAAATAGAAGAATGTCAGCACAAGAGCTAT
JMFS039H09+                                      CAGCAAATAGAAGAATGTCAGCACAAGAGCTAT
                      ____________________________________________________________
consensus             TAGGTTTTGACATTGGCCACCTATGTGCAGCAAATAGAAGAATGTCAGCACAAGAGCTAT
 
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JMSF049N21+           TCATTTTGTAGCTCTTCCTGGGGTGAATTGTTTCCTTCTGCACAGTTTCAATTTCCAATG
JMFS122A03+           TCATTTTGTAGCTCTTCCTGGGGTGAATTGTTTCCTTCTGCACAGTTTCAATTTCCAATG
JMFS124G07+           TCATTTTGTAGCTCTTCCTGGGGTGAATTGTTTCCTTCTGCACAGTTTCAATTTCCAATG
JMFS098D11+           TCATTTTGTAGCTCTTCCTGGGGTGAATTGTTTCCTTCTGCACAGTTTCAATTTCCAATG
JMFS039H09+           TCATTTGNTAGCTCTTCCTGGGGTGAATTGTTTCCTTCTGCACAGTTTCAATTTCCAATG
                      ____________________________________________________________
consensus             TCATTTTGTAGCTCTTCCTGGGGTGAATTGTTTCCTTCTGCACAGTTTCAATTTCCAATG
 
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JMSF049N21+           CATCTAACTCCTGATCTAGAACCTGGCAAAGATCCATGACCACACTTTCATGGATCTTCT
JMFS122A03+           CATCTAACTCCTGATCTAGAACCTGGCAAAGATCCATGACCACACTTTCATGGATCTTCT
JMFS124G07+           CATCTAACTCCTGATCTAGAACCTGGCAAAGATCCATGACCACACTTTCATGGATCTTCT
JMFS098D11+           CATCTAACTCCTGATCTAGAACCTGGCAAAGATCCATGACCACACTTTCATGGATCTTCT
JMFS039H09+           CATCTAACTCCTGATCTAGAACCTGGCAAAGATCCATGACCACACTTTCATGGATCTTCT
                      ____________________________________________________________
consensus             CATCTAACTCCTGATCTAGAACCTGGCAAAGATCCATGACCACACTTTCATGGATCTTCT
 
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JMSF049N21+           GCCACAAGT                                                   
JMFS122A03+           GCCACAAGTGAGCACGGAATATCTGAATCAATGAGATCTTTAGAGTCGGTATCTTTCCGT
JMFS124G07+           GCCACAAGTGAGCACGGAATATCTGAATCAATGAGATCTTTAGAGTCGGTATCTTTCCGT
JMFS098D11+           GCCACAAGTGAGCACGGAATATCTGAATCAATGAGATCTTTAGAGTCGGTATCTTTCCGT
JMFS039H09+           GCCACAAGTGAGCACGGAATATCTGAATCAATGAGATCTTTAGAGTCGGTATCTTTCCGT
                      ____________________________________________________________
consensus             GCCACAAGTGAGCACGGAATATCTGAATCAATGAGATCTTTAGAGTCGGTATCTTTCCGT
 
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JMFS122A03+           GCATGAAAATCCCTGTCAAATCCAGCTGCACTTGGAAACCAACATAAACATTGGCACGAT
JMFS124G07+           GCATGAAAATCCCTGTCAAATCCAGCTGCACTTGGAAACCAACATAAACATTGGCACGAT
JMFS098D11+           GCATGAAAATCCCTGTCAAATCCAGCTGCACTTGGAAACCAACATAAACATTGGCACGAT
JMFS039H09+           GCATGAAAATCCCTGTCAAATCCAGCTGCACTTGGAAACCAACATAAACATTGGCACGAT
                      ____________________________________________________________
consensus             GCATGAAAATCCCTGTCAAATCCAGCTGCACTTGGAAACCAACATAAACATTGGCACGAT
 
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JMFS122A03+           TGATTGTAGGTGACCACCAGAGTGTGAACCTACGGTTAGGGATTTGGTTAAGCCCAGATC
JMFS124G07+           TGATTGTAGGTGACCACCAGAGTGTGAACCTACGGTTAGGGATTTGGTTAAGCCCAGATC
JMFS098D11+           TGATTGTAGGTGACCACCAGAGTGTGAACCTACGGTTAGGGATTTGGTTAAGCCCAGATC
JMFS039H09+           TGATTGTAGGTGACCACCAGAGTGTGAACCTACGGTTAGGGATTTGGTTAAGCCCAGATC
JMFS013A10+                                           CGGTTAGGGATTTGGTTAAGCCCAGATC
                      ____________________________________________________________
consensus             TGATTGTAGGTGACCACCAGAGTGTGAACCTACGGTTAGGGATTTGGTTAAGCCCAGATC
 
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JMFS122A03+           TCTGTGCATTTGTCAGTTTCTTATATTTCATGGACTCTTCGAAACCTGAAGCCTTCTCCC
JMFS124G07+           TCTGTGCATTTGTCAGTTTCTTATATTTCATGGACTCTTCGAAACCTGAAGCCTTCTCCC
JMFS098D11+           TCTGTGCATTTGTCAGTTTCTTATATTTCATGGACTCTTCGAAACCTGAAGCCTTCTCCC
JMFS039H09+           TCTGTGCATTTGTCAGTTTCTTATATTTCATGGACTCTTCGAAACCTGAAGCCTTCTCCC
JMFS013A10+           TCTGTGCATTGNTCAGTTTCTTATATTTCATGGACTCTTCGAAACCTGAAGCCTTCTCCC
                      ____________________________________________________________
consensus             TCTGTGCATTTGTCAGTTTCTTATATTTCATGGACTCTTCGAAACCTGAAGCCTTCTCCC
 
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JMFS122A03+           AAAAAAGACCCTCCCATGTAGGAAAGTATGTTCCTTTAAATAGCGTATGCTCAAGAATTC
JMFS124G07+           AAAAAAGACCCTCCCATGTAGGAAAGTATGTTCCTTTAAATAGCGTATGCTCAAGAATTC
JMFS098D11+           AAAAAAGACCCTCCCATGTAGGAAAGTATGTTCCTTTAAATAGCGTATGCTCAAGAATTC
JMFS039H09+           AAAAAAGACCCTCCCATGTAGGAAAGTATGTTCCTTTAAATAGCGTATGCTCAAGAATTC
JMFS013A10+           AAAAAAGACCCTCCCATGTAGGAAAGTATGTTCCTTTAAATAGCGTATGCTCAAGAATTC
                      ____________________________________________________________
consensus             AAAAAAGACCCTCCCATGTAGGAAAGTATGTTCCTTTAAATAGCGTATGCTCAAGAATTC
 
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JMFS122A03+           CTTCAACTCCTCCAA                                             
JMFS124G07+           CTTCAACTCCTCCAAGAGCTTGAATTACATCTGTTCGATAGTTGTTCAGGTTCCAAAGCT
JMFS098D11+           CTTCAACTCCTCCAAGAGCTTGAATTACATCTGTTCGATAGTTGTTCAGGTTCCAAAGCT
JMFS039H09+           CTTCAACTCCTCCAAGAGCTTGAATTACATCTGTTCGATAGTTGTTCAGGTTCCAAAGCT
JMFS013A10+           CTTCAACTCCTCCAAGAGCTTGAATTACATCTGTTCGATAGTTGTTCAGGTTCCAAAGCT
                      ____________________________________________________________
consensus             CTTCAACTCCTCCAAGAGCTTGAATTACATCTGTTCGATAGTTGTTCAGGTTCCAAAGCT
 
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JMFS124G07+           TTCCATCATGTCTCTGGTGTGTCCACCAGAAAGGA                         
JMFS098D11+           TTCCATCATGTCTCTGGTGTGTCCACCAGAAAGGATTCTGTTTAAGAACTTGGTACTGTT
JMFS039H09+           TTCCATCATGTCTCTGGTGTGTCCACCAGAAAGGATTCTGTTTAAGAACTTGGTACTGTT
JMFS013A10+           TTCCATCATGTCTCTGGTGTGTCCACCAGAAAGGATTCTGTTTAAGAACTTGGTACTGTT
                      ____________________________________________________________
consensus             TTCCATCATGTCTCTGGTGTGTCCACCAGAAAGGATTCTGTTTAAGAACTTGGTACTGTT
 
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JMFS098D11+           TAAAATCAGTCCGTACCCTCCATCCTTTGTCATATGCAA                     
JMFS039H09+           TAAAATCAGTCCGTACCCTCCATCCTTTGTCATATGCAAGGGTGTGACGATCCTTTTGGA
JMFS013A10+           TAAAATCAGTCCGTACCCTCCATCCTTTGTCATATGCAAGGGTGTGACGATCCTTTTGGA
                      ____________________________________________________________
consensus             TAAAATCAGTCCGTACCCTCCATCCTTTGTCATATGCAAGGGTGTGACGATCCTTTTGGA
 
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JMFS013A10+           ACAAAGTATTTATTCGAGGTATCCCACGGTCCCAAGAATCTTCCAGATCTTCAAGTGTCA
                      ____________________________________________________________
consensus             ACAAAGTATTTATTCGAGGTATCCCACGGTCCCAAGAATCTTCCAGATCTTCAAGTGTCA
 
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JMFS013A10+           AACGCCTATTCTGTGCCTGAGCTTCCTGCCTCTTCAATGCATACTCAGCCCAAACTCTCT
                      ____________________________________________________________
consensus             AACGCCTATTCTGTGCCTGAGCTTCCTGCCTCTTCAATGCATACTCAGCCCAAACTCTCT
 
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JMFS013A10+           GTGAATCAATAAATTCACTCTCCCATGGCTGTATGTATCTGTAAAGATTTGGAATCAACT
                      ____________________________________________________________
consensus             GTGAATCAATAAATTCACTCTCCCATGGCTGTATGTATCTGTAAAGATTTGGAATCAACT
 
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JMFS013A10+           GGTCTTCTTCGTGACTCATCCCACTCCTGAAATGGGTCACACCAACATCTGTTTGTTGAC
JMFS116C12+                                                            TGTTTGTTGAC
                      ____________________________________________________________
consensus             GGTCTTCTTCGTGACTCATCCCACTCCTGAAATGGGTCACACCAACATCTGTTTGTTGAC
 
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JMFS013A10+           TATACCGAAGATCACTCTGAGGGATCAAAATGTGACCCA                     
JMFS116C12+           TATACCGAAGATCACTCTGAGGGATCAAAATGTGACCCATTGATAACATGCCCAGTCCCC
                      ____________________________________________________________
consensus             TATACCGAAGATCACTCTGAGGGATCAAAATGTGACCCATTGATAACATGCCCAGTCCCC
 
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JMFS116C12+           CAATTTCCTTCGGTGTATAGAAGATTACAGGAGGGAACCTGCTGGGCATTTTTGAATTCA
                      ____________________________________________________________
consensus             CAATTTCCTTCGGTGTATAGAAGATTACAGGAGGGAACCTGCTGGGCATTTTTGAATTCA
 
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JMFS116C12+           ACCCTATCTTGATACGAGTTTGTATCTTATTTTCACATTTGACCAGAAGATCCAGTAGTT
                      ____________________________________________________________
consensus             ACCCTATCTTGATACGAGTTTGTATCTTATTTTCACATTTGACCAGAAGATCCAGTAGTT
 
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JMFS116C12+           CCTGAGTGTGCACTGTTGCTTCACGGAAATATGTCATGAGACCTATAAGAGCTGTATTCC
                      ____________________________________________________________
consensus             CCTGAGTGTGCACTGTTGCTTCACGGAAATATGTCATGAGACCTATAAGAGCTGTATTCC
 
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JMFS116C12+           ACTTGTTAACAATCTTTGTAAATGTTGTAGAGCCAGAAGACATGAGGATCTGCCTCACAC
                      ____________________________________________________________
consensus             ACTTGTTAACAATCTTTGTAAATGTTGTAGAGCCAGAAGACATGAGGATCTGCCTCACAC
 
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JMFS116C12+           GATTCTCAAACACCTTCATATGCTCATCATCCACCCTCAAAAAGGCAACAGCTGTCCGTT
                      ____________________________________________________________
consensus             GATTCTCAAACACCTTCATATGCTCATCATCCACCCTCAAAAAGGCAACAGCTGTCCGTT
 
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JMFS116C12+           CCTTCGTCTGCTCATTCTGCAGATTCCATACTCCATCCCTTGTATTGCTAAATGCCTCCT
                      ____________________________________________________________
consensus             CCTTCGTCTGCTCATTCTGCAGATTCCATACTCCATCCCTTGTATTGCTAAATGCCTCCT
 
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JMFS116C12+           GAGTCATTCTTATCTTTGGCAGTATTCTAACTTCAAATCCACACATGCTGAAAAGCAGGT
                      ____________________________________________________________
consensus             GAGTCATTCTTATCTTTGGCAGTATTCTAACTTCAAATCCACACATGCTGAAAAGCAGGT
 
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JMFS116C12+           TGGGATTATCTTTACTGTATACAGAGACAAAACTGTTCTCCCACTCCAACGTGGTGATGC
                      ____________________________________________________________
consensus             TGGGATTATCTTTACTGTATACAGAGACAAAACTGTTCTCCCACTCCAACGTGGTGATGC
 
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JMFS116C12+           TTCTTGGTAGTCGGTTCTTCATGTCCCAGAAGACACTTCTCCCTAGATTGACATCATGTT
                      ____________________________________________________________
consensus             TTCTTGGTAGTCGGTTCTTCATGTCCCAGAAGACACTTCTCCCTAGATTGACATCATGTT