Contig 004854:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+                                                                AACGTTG
                      ____________________________________________________________
consensus                                                                  AACGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           CACTCCCAGCTGTAAAGGGATGCGGGACTTTGGAGTGGTGGTGTAGCCAGTGATAAAGCG
JMFS116A10+                                           GAGTGGTGGTGTAGCCAGTGATAAAGCG
                      ____________________________________________________________
consensus             CACTCCCAGCTGTAAAGGGATGCGGGACTTTGGAGTGGTGGTGTAGCCAGTGATAAAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           GGAAGAGATCCCGAGTGTGCAATAGCCTATGCATCAAATAGTAGAGCGGCTCGGAGAGCC
JMFS116A10+           GGAAGAGATCCCGAGTGTGCAATAGCCTATGCATCAAATAGTAGAGCGGCTCGGAGAGCC
                      ____________________________________________________________
consensus             GGAAGAGATCCCGAGTGTGCAATAGCCTATGCATCAAATAGTAGAGCGGCTCGGAGAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           CCATATGCAATGCAACACAGCAAATCGCCCCTCTTGCATCCCAAATGGGAAGATTGGCCA
JMFS116A10+           CCATATGCAATGCAACACAGCAAATCGCCCCTCTTGCATCCCAAATGGGAAGATTGGCCA
                      ____________________________________________________________
consensus             CCATATGCAATGCAACACAGCAAATCGCCCCTCTTGCATCCCAAATGGGAAGATTGGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           GGGAAGGGAAGCTCAAATATACAAATGCACCCATAATGGCTTGGAGTAATAAGAAATTGT
JMFS116A10+           GGGAAGGGAAGCTCAAATATGCAAATGCACCCATAATGGCTTGGAGTAATAAGAAATTGT
                      ____________________________________________________________
consensus             GGGAAGGGAAGCTCAAATATGCAAATGCACCCATAATGGCTTGGAGTAATAAGAAATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           CCCAATGCCATTCCTTGTCAATTTGCTCGAAATCTACGCCCCGTCTATACACCCGTTTCG
JMFS116A10+           CCCAATGCCATTCCTTGTCAATTTGCTCGAAATCTACGCCCCGTCTATACACCCGTTTCG
                      ____________________________________________________________
consensus             CCCAATGCCATTCCTTGTCAATTTGCTCGAAATCTACGCCCCGTCTATACACCCGTTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           GGCGATGAAAGAAGAGCATATTAGTATGACTACTCCATAACTGATGAACTAAACCTCTCA
JMFS116A10+           GGCGATGAAAGAAGAGCATATTAGTATGACTACTCCATAACTGATGAACTAAACCTCTCA
                      ____________________________________________________________
consensus             GGCGATGAAAGAAGAGCATATTAGTATGACTACTCCATAACTGATGAACTAAACCTCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           GGGCACACAAGGCAAGAATATGTAAGCACCAAACATCTTCCCACTTCTTTCTCCAAACCA
JMFS116A10+           GGGCACACAAGGCAAGAATATGTAAGCACCAAACATCTTCCCACTTCTTTCTCCAAACCA
                      ____________________________________________________________
consensus             GGGCACACAAGGCAAGAATATGTAAGCACCAAACATCTTCCCACTTCTTTCTCCAAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           ATGAATACATCAATTTTGCAATAAATGGTCCATATAATAAATACTTGAAATGACCCAAAT
JMFS116A10+           ATGAATACATCAATTTTGCAATAAATGGTCCATATAATAAATACTTGAAATGACCCAAAT
                      ____________________________________________________________
consensus             ATGAATACATCAATTTTGCAATAAATGGTCCATATAATAAATACTTGAAATGACCCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           TTTCCCAAGGCCAAGCAAATAAGGGAGCATTTCTTTTCCCAGGAAGACAGTATTCTTGAA
JMFS116A10+           TTTCCCAAGGCCAAGCAAATAAGGGAGCATTTCTTTTCCCAGGAAGACAGTATTCTTGAA
                      ____________________________________________________________
consensus             TTTCCCAAGGCCAAGCAAATAAGGGAGCATTTCTTTTCCCAGGAAGACAGTATTCTTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS010H06+           CAACAACATTGTAATCCTCCATCTCAACAAAAACCTATGTTCTTGTTATACATAC     
JMFS116A10+           CAACAACATTGTAATCCTCCATCTCAACAAAAACCTATGTTCTTGTTATACATACATACA
                      ____________________________________________________________
consensus             CAACAACATTGTAATCCTCCATCTCAACAAAAACCTATGTTCTTGTTATACATACATACA