| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K20 | Sequence | 481 | 004853 (10) | ref|XP_008394069.1| | 2e-60 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming]-like [Malus d | 712 | 011074 (3) | gb|AAO25536.1| | 1e-65 | cellulose synthase [Populus tremuloides] |
| JMFF014M01 | Sequence | 528 | 004853 (10) | gb|EYU32338.1| | 2e-57 | hypothetical protein MIMGU_mgv1a000544mg [Erythranthe guttata] | 687 | 020172 | gb|AAO25536.1| | 3e-73 | cellulose synthase [Populus tremuloides] |
| JMFF025G15 | Sequence | 579 | 004853 (10) | ref|XP_008219478.1| | 9e-66 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume] | 714 | 011074 (3) | gb|AAO25536.1| | 1e-65 | cellulose synthase [Populus tremuloides] |
| JMFS024C10 | Sequence | 604 | 004853 (10) | emb|CBI21020.3| | 9e-105 | unnamed protein product [Vitis vinifera] | |||||
| JMFS042D06 | Sequence | 628 | 004853 (10) | emb|CBI21020.3| | 3e-105 | unnamed protein product [Vitis vinifera] | |||||
| JMFS092B06 | Sequence | 603 | 004853 (10) | ref|XP_008219478.1| | 2e-83 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume] | |||||
| JMFS101F05 | Sequence | 595 | 004853 (10) | gb|AGV22109.1| | 4e-114 | cellulose synthase 7 [Betula luminifera] | |||||
| JMFS111B10 | Sequence | 625 | 004853 (10) | ref|XP_008219478.1| | 2e-79 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume] | |||||
| JMFS125E05 | Sequence | 526 | 004853 (10) | gb|EYU32338.1| | 4e-57 | hypothetical protein MIMGU_mgv1a000544mg [Erythranthe guttata] | |||||
| JMFS159B02 | Sequence | 300 | 004853 (10) | ref|XP_006361724.1| | 3e-46 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Solanum tube | |||||
This contig is upended
. : . : . : . : . : . :
JMFS101F05+ GACAGCA
____________________________________________________________
consensus GACAGCA
. : . : . : . : . : . :
JMFS101F05+ CTGTGTTTGCTGTGACAAGAGGAGGCTCTTTCAAAGGATCCACAGTACTGACAAAAACAT
____________________________________________________________
consensus CTGTGTTTGCTGTGACAAGAGGAGGCTCTTTCAAAGGATCCACAGTACTGACAAAAACAT
. : . : . : . : . : . :
JMFS101F05+ CCACTGGTGCTAACTGAGAAGGCTCCCCCTCCCTATCATATCTTAATGCAAGCCTGTCCA
JMFS024C10+ AGCCTGTCTA
____________________________________________________________
consensus CCACTGGTGCTAACTGAGAAGGCTCCCCCTCCCTATCATATCTTAATGCAAGCCTGTCTA
. : . : . : . : . : . :
JMFS101F05+ GATAGGTCTCACGGTTGATGGGTGACCATTTTGGGAACTGATCCAAAAGCCAAGATAAGG
JMFS024C10+ GATAGGTCTCACGATTGATGGGTGACCATTTTGGGAACTGATCCAAAAGCCAAGATAAGG
____________________________________________________________
consensus GATAGGTCTCACGGTTGATGGGTGACCATTTTGGGAACTGATCCAAAAGCCAAGATAAGG
. : . : . : . : . : . :
JMFS101F05+ CAAACCAAACTTCACAGATAACCGATACCAACCACAAAGGATAGGCATCATTCACAGGGT
JMFS024C10+ CGAACCAAACCTCACAGATAACTGATACCAGCCACAAAGGATAGGCATCATTCACAGGGT
____________________________________________________________
consensus CGAACCAAACTTCACAGATAACTGATACCAGCCACAAAGGATAGGCATCATTCACAGGGT
. : . : . : . : . : . :
JMFS101F05+ GAGTCAGCCGGTATTGCATGAAAAAGCCCAAGATGATCAACCGAAGTATAATTACAACCC
JMFS024C10+ GAGTCAGCCGGTATTGCAAGAAAAAACCCAAGATGATCAACCGAAGTATAATTACAACCC
____________________________________________________________
consensus GAGTCAGCCGGTATTGCATGAAAAAGCCCAAGATGATCAACCGAAGTATAATTACAACCC
. : . : . : . : . : . :
JMFS101F05+ GATAAGGGGTAAGGTGAGAAGAAGAGATAGGAATCACACGACTTAAAGGTTGGCGAGCAT
JMFS024C10+ GGTAAGGGGTAACGTGAGAAGAAGGGATAGGAATCACACGACTTAAAGGTTGGCGATCAT
____________________________________________________________
consensus GGTAAGGGGTAAGGTGAGAAGAAGGGATAGGAATCACACGACTTAAAGGTTGGCGATCAT
. : . : . : . : . : . :
JMFS101F05+ CATCAGCCATTTGTAGCTCTTCTCCATTTGATCCTGTCCCCTCAATGTCTCCTTTCCCTT
JMFS024C10+ CATCAGCCATTTGTAGCTCGTCTCCATTTGACCCTGTCCCTTCAATGTCTCCTTTCCCTT
____________________________________________________________
consensus CATCAGCCATTTGTAGCTCTTCTCCATTTGATCCTGTCCCTTCAATGTCTCCTTTCCCTT
. : . : . : . : . : . :
JMFS101F05+ CCGAGTATCTGTTGGTTATTTGAGTCATACTTTTCTCCTGTTTAAGTTTCCAACCTTCTA
JMFS024C10+ CCATGTATCTGTTGGTTATTTGAGTCATATTTTTGTCCTGTTTAAGTTTCCAACCTTCAA
JMFS042D06+ TTAAGTTTCCAACCTTCAA
____________________________________________________________
consensus CCGTGTATCTGTTGGTTATTTGAGTCATATTTTTGTCCTGTTTAAGTTTCCAACCTTCAA
. : . : . : . : . : . :
JMFS101F05+ CTCTCTCTTTCCAGTCAACACTACCAAGCCCGTAAGAATTCAAGTCCTTTGAAGGGTCCA
JMFS024C10+ CTCTCTCTTTCCAGTCAACGCTACCAAGTCCATAAGAATTCAAGTCCTTTGAAGGGTCCA
JMFS042D06+ CTCTCTCTTTCCAGTCAACGCTACCAAGTCCATAAGAATTCAAGTCCTTTGAAGGGTCCA
____________________________________________________________
consensus CTCTCTCTTTCCAGTCAACGCTACCAAGTCCATAAGAATTCAAGTCCTTTGAAGGGTCCA
. : . : . : . : . : . :
JMFS101F05+ CAATTCTCACAGGAACTGGTTGCCTCGGGTCAAGGTATGGTAGGGAGT
JMFS024C10+ CAATTCTGACGGGAACTGGCTGCCTTGGATCAAGGTACGGTAAGGAGTGACCATGCTTAT
JMFS042D06+ CAATTCTGACGGGAACTGGCTGCCTTGGATCAAGGTACGGTAAGGAGTGACCATGCTTAT
____________________________________________________________
consensus CAATTCTGACGGGAACTGGCTGCCTTGGATCAAGGTACGGTAAGGAGTGACCATGCTTAT
. : . : . : . : . : . :
JMFS024C10+ CTCCAGGACCCAAAGGTCCCGACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
JMFS042D06+ CTCCAGGACCCAAAGGTCCCGACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
JMFS092B06+ ACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
JMFS111B10+ GATTGAGTATCCGGTGTGGCACTTA
____________________________________________________________
consensus CTCCAGGACCCAAAGGTCCCGACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
. : . : . : . : . : . :
JMFS024C10+ GAGGGATTTCACCAGAGATTGGCTGCCCATT
JMFS042D06+ GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
JMFS092B06+ GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
JMFF025G15+ CTAG
JMFS111B10+ GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
____________________________________________________________
consensus GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
. : . : . : . : . : . :
JMFS042D06+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
JMFS092B06+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
JMFF004K20+ TCCTT
JMFF025G15+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
JMFS159B02+ AGCCTTGACATTTCCTT
JMFS111B10+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
____________________________________________________________
consensus AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
. : . : . : . : . : . :
JMFS042D06+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFS092B06+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFF004K20+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFF025G15+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFF014M01+ TTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFS125E05+ AACATCCTCCTCCTCATCATCACCGTCAA
JMFS159B02+ CGCCATAATTGAACTCATTGACAAGGTCGTCAACATCCTCCTCCTCATCATCACCGTCAA
JMFS111B10+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
____________________________________________________________
consensus CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
. : . : . : . : . : . :
JMFS042D06+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFS092B06+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFF004K20+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFF025G15+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFF014M01+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFS125E05+ CTCGTGGGCTCCCTTTAAGCCTCTTGTATCGGGTCTTGCACTGGGGGCATGCTTGGTTCC
JMFS159B02+ CTCGTGGGCTCCCTTTAAGCCTCTTGTATCGGGTCTTGCACTGGGGGCATGCTTGGTTCC
JMFS111B10+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
____________________________________________________________
consensus CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
. : . : . : . : . : . :
JMFS042D06+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFS092B06+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFF004K20+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFF025G15+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFF014M01+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFS125E05+ CATCTTTGCGTTCATACTCATAACAAGTCCGACAAACAGGAAAGGCACACTCATTACAAG
JMFS159B02+ CATCTTTGCGTTCATACTCATAACAAGTCCGACAAACAGGAAAGGCACACTCATTACAAG
JMFS111B10+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
____________________________________________________________
consensus CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
. : . : . : . : . : . :
JMFS042D06+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFS092B06+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFF004K20+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFF025G15+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFF014M01+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFS125E05+ CAACAAATATATCACCATTAGCAGTCACCCCAACAGTATCACCGCAAATCTGACATATCT
JMFS159B02+ CAACAAATATATCACCATTAGCAGTCACCCCAACAGTATCACCGCAAATCTGACATATCT
JMFS111B10+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
____________________________________________________________
consensus CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
. : . : . : . : . : . :
JMFS042D06+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFS092B06+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFF004K20+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFF025G15+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFF014M01+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFS125E05+ GACTATCCAGATTCTTCAGGGGCTTCGGCGCACTATCAGAATCATGGCGGATCCGAACCA
JMFS159B02+ GACTATCCAGATTCCTCAGGGGCTTCGGCGCACTATCAGAATC
JMFS111B10+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
____________________________________________________________
consensus GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
. : . : . : . : . : . :
JMFS042D06+ GC
JMFS092B06+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFF004K20+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFF025G15+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFF014M01+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFS125E05+ GCTCATTCCGCTTGTGCGACCCAGCAACCATCCCAGCACTTGCCTCCATTTCTTC
JMFS111B10+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
____________________________________________________________
consensus GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
. : . : . : . : . : . :
JMFS092B06+ GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
JMFF004K20+ GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
JMFF025G15+ GAAACAGAGGATTTCTACAGTATTATT
JMFF014M01+ GAAACAGAGGA
JMFS111B10+ GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
____________________________________________________________
consensus GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
. : . : . : . : . : . :
JMFS092B06+ GCAAATTCGTGGG
JMFF004K20+ GCAAATTCGTGGGAAAAAAATATTTTTTTATTGGGGTTTAATAATAAATAAAAGAT
JMFS111B10+ GCAAATTCGTGGGAAAAAAATATTTTTTTATTGGGGTTTAATAATAAATAAAAGATAAAA
____________________________________________________________
consensus GCAAATTCGTGGGAAAAAAATATTTTTTTATTGGGGTTTAATAATAAATAAAAGATAAAA