Contig 004851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047L13Sequence648004851 (4)ref|XP_011082787.1|2e-43PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440607011200 (2)ref|XP_006370097.1|4e-32hypothetical protein POPTR_0001s394901g, partial [Populus trichocarpa] gb|ERP666
JMFS075F07Sequence359004851 (4)ref|XP_010065089.1|6e-08PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430
JMFS110B08Sequence627004851 (4)ref|XP_011082787.1|4e-13PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440
JMSF017C24Sequence220004851 (4)755011200 (2)gb|EYU29542.1|4e-67hypothetical protein MIMGU_mgv1a0269212mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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JMFF047L13+                                                                    TAG
                      ____________________________________________________________
consensus                                                                      TAG
 
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JMFF047L13+           AAATATCGCCTATTTCTTTGGGTATTGTCCCATGNATGCGATTTCCCAAAAGTGACAACT
                      ____________________________________________________________
consensus             AAATATCGCCTATTTCTTTGGGTATTGTCCCATGNATGCGATTTCCCAAAAGTGACAACT
 
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JMFF047L13+           TAGTGAGACGGAGTTGGCCAAAGCTACGAGAAATTGATCCACTAATGTAATTGCGAGTCA
                      ____________________________________________________________
consensus             TAGTGAGACGGAGTTGGCCAAAGCTACGAGAAATTGATCCACTAATGTAATTGCGAGTCA
 
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JMFF047L13+           GATCCAATACTTGCAGAAATTTAAGTTTTGCAAAGTCTTCTGCAGGAGGAAGAACTCCAG
                      ____________________________________________________________
consensus             GATCCAATACTTGCAGAAATTTAAGTTTTGCAAAGTCTTCTGCAGGAGGAAGAACTCCAG
 
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JMFF047L13+           GGAGATTAAGACCTTTCAACAGGATCTGTGTCACATGGCAAATTGTACTACCATTGAAAG
JMFS110B08+                                            CATGGCAAATTGTACTACCATTGAAAG
                      ____________________________________________________________
consensus             GGAGATTAAGACCTTTCAACAGGATCTGTGTCACATGGCAAATTGTACTACCATTGAAAG
 
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JMFF047L13+           TGCAATTACAAAATACATGGCTGAATGTATCGTTGCCGGATCCATTTTGATCATCATCAG
JMFS075F07+                                                          TGATCATCATCAG
JMFS110B08+           TGCAATTACAAAATACATGGCTGAATGTATCGTTGCCGGATCCATTTTGATCATCATCAG
                      ____________________________________________________________
consensus             TGCAATTACAAAATACATGGCTGAATGTATCGTTGCCGGATCCATTTTGATCATCATCAG
 
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JMFF047L13+           AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
JMFS075F07+           AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
JMFS110B08+           AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
                      ____________________________________________________________
consensus             AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
 
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JMFF047L13+           TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
JMFS075F07+           TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
JMFS110B08+           TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
                      ____________________________________________________________
consensus             TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
 
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JMFF047L13+           AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
JMFS075F07+           AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
JMSF017C24+                              AGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
JMFS110B08+           AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
                      ____________________________________________________________
consensus             AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
 
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JMFF047L13+           ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
JMFS075F07+           ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
JMSF017C24+           ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
JMFS110B08+           ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
                      ____________________________________________________________
consensus             ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
 
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JMFF047L13+           CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
JMFS075F07+           CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
JMSF017C24+           CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
JMFS110B08+           CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
                      ____________________________________________________________
consensus             CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
 
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JMFF047L13+           TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAA                 
JMFS075F07+           TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAA                 
JMSF017C24+           TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAATGCTCTCCAGTCTCC  
JMFS110B08+           TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAATGCTCTCCAGTCTCCAC
                      ____________________________________________________________
consensus             TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAATGCTCTCCAGTCTCCAC
 
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JMFS110B08+           GGACGGAAGTAAATGGTTAGACAATCAAAATTTAAAATAATATATCATCACTGTAATAAA
                      ____________________________________________________________
consensus             GGACGGAAGTAAATGGTTAGACAATCAAAATTTAAAATAATATATCATCACTGTAATAAA
 
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JMFS110B08+           AGTCAGACTACCTAGTCGGCTAATCCTAATTCCTAATTTTGTCTACGTCGAAAAATCGAA
                      ____________________________________________________________
consensus             AGTCAGACTACCTAGTCGGCTAATCCTAATTCCTAATTTTGTCTACGTCGAAAAATCGAA
 
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JMFS110B08+           ATAATTATGCCGGAAAGTGTTACAAGGAATTTCTACACGGTTTTAAAATTCCACACACTA
                      ____________________________________________________________
consensus             ATAATTATGCCGGAAAGTGTTACAAGGAATTTCTACACGGTTTTAAAATTCCACACACTA