Contig 004841:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS093C01+                                    GCTGTTGCCCAAGAGCTTGCGGAGGCGGTGCTTTT
                      ____________________________________________________________
consensus                                      GCTGTTGCCCAAGAGCTTGCGGAGGCGGTGCTTTT
 
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JMFS093C01+           GTCCTCNCCGGCTATATCATCCAAAGTACAGTTATACCAACAATCACCATAAATTGGAGG
                      ____________________________________________________________
consensus             GTCCTCNCCGGCTATATCATCCAAAGTACAGTTATACCAACAATCACCATAAATTGGAGG
 
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JMFS093C01+           ATCCCCATGCGGATTACAAGAAGGTGTACCAGAATACGAAGCACCTGGTGGCTCTCCTAA
                      ____________________________________________________________
consensus             ATCCCCATGCGGATTACAAGAAGGTGTACCAGAATACGAAGCACCTGGTGGCTCTCCTAA
 
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JMFS093C01+           CTTTACAACATCTCCAACATTTTGACAGTCCCTGTCAGATGAGTGGCCAACAGCATCGTA
                      ____________________________________________________________
consensus             CTTTACAACATCTCCAACATTTTGACAGTCCCTGTCAGATGAGTGGCCAACAGCATCGTA
 
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JMFS093C01+           ATTTAAAATAATCCTAATGGGTTGCATAGCATCCTTCGGTTGTTTCCTTGAAAATTCCAG
JMFS097B05+                                                                 TTCCAG
                      ____________________________________________________________
consensus             ATTTAAAATAATCCTAATGGGTTGCATAGCATCCTTCGGTTGTTTCCTTGAAAATTCCAG
 
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JMFS093C01+           CAATGCCCTTCCCCTGCGATGAAGAGGCTCCGAGACAGCAGACTCCTCGTAGACCTGAGG
JMFS097B05+           CAATGCCCTTCCCCTGCGATGAAGAGGCTCCGAGACAGCAGACTCCTCGTAGACCTGAGG
JMFS165F11+                                       TCCGAGACAGCAGACTCNTCGTAGACCTGAGG
                      ____________________________________________________________
consensus             CAATGCCCTTCCCCTGCGATGAAGAGGCTCCGAGACAGCAGACTCCTCGTAGACCTGAGG
 
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JMFS093C01+           GCTAACAGAATAGACCCGGCGGCCAGGTCTCTTTCTCTGTTCAATTATCTGATCATGAAT
JMFS036G09+                                                  TTCAATTATCTGATCATGAAT
JMFS097B05+           GCTAACAGAATAGACCCGGCGGCCAGGTCTCTTTCTCTGTTCAATTATCTGATCATGAAT
JMFS165F11+           GCTAACAGAATAGACCCGGCGGCCAGGTCTCTTTCTCTGTTCAATTATCTGATCATGAAT
JMFS103E12+                           CGGCGGCCAGGTCTCTTTCTCTGTTCAATTATCTGATCATGAAT
                      ____________________________________________________________
consensus             GCTAACAGAATAGACCCGGCGGCCAGGTCTCTTTCTCTGTTCAATTATCTGATCATGAAT
 
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JMFS093C01+           ACAAGAATGAGATACAATATCTTCATTCTGCTTTTCCGCCCTTTGCCTCAGTAACTGATG
JMFS036G09+           ACAAGAATGAGATACAATATCTTCATTCTGCTTTTCCGCCCTTTGCCTCAGTAACTGATG
JMFS097B05+           ACAAGAATGAGATACAATATCTTCATTCTGCTTTTCCGCCCTTTGCCTCAGTAACTGATG
JMFS165F11+           ACAAGAATGAGATACAATATCTTCATTCTGCTTTTCCGCCCTTTGCCTCAGTAACTGATG
JMFS027D05+                                        GCTTTTCCGCCCTTTGCCTCAGTAACTGATG
JMFS103E12+           ACAAGAATGAGATACAATATCTTCATTCTGCTTTTCCGCCCTTTGCCTCAGTAACTGATG
                      ____________________________________________________________
consensus             ACAAGAATGAGATACAATATCTTCATTCTGCTTTTCCGCCCTTTGCCTCAGTAACTGATG
 
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JMFS093C01+           ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
JMFS036G09+           ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
JMFS097B05+           ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
JMFS165F11+           ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
JMFS027D05+           ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
JMFS103E12+           ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
                      ____________________________________________________________
consensus             ATCATGGATTGTCGCATGTCCAGACTCTAAGCAGAGTAACAGCAATACAACCTGGAGAAG
 
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JMFS093C01+           AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
JMFS036G09+           AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
JMFS097B05+           AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
JMFS165F11+           AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
JMFS027D05+           AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
JMFS103E12+           AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
                      ____________________________________________________________
consensus             AGAGATTGGAAATCGGAGCTTAGTCGAAAACCCCGGCTTTGAATAAACACTAACAGTACT
 
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JMFS093C01+           ACATAAA                                                     
JMFS036G09+           ACATAAACTACAACACCAAATCTTCAACTCCATTAAACGAAGCTTTCAAGACCACCGCCG
JMFS097B05+           ACATAAACTACAACACCAAATCTTCAACTCCATTAAACGAAGCTTTCAAGACCACCGCCG
JMFS165F11+           ACATAAACTACAACACCAAATCTTCAACTCCATTAAACGAAGCTTTCAAGACCACCGCCG
JMFS027D05+           ACATAAACTACAACACCAAATCTTCAACTCCATTAAACGAAGCTTTCAAGACCACCGCCG
JMFS103E12+           ACATAAACTACAACACCAAATCTTCAACTCCATTAAACGAAGCTTTCAAGACCACCGCCG
                      ____________________________________________________________
consensus             ACATAAACTACAACACCAAATCTTCAACTCCATTAAACGAAGCTTTCAAGACCACCGCCG
 
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JMFS036G09+           CTACTCCAAACCACACAGGTTCCATCAAATCGCTGCGGGAGCTTCTCCGATCGGCTCCGG
JMFS097B05+           CTACTCCAAACCACACAGGTTCCATCAAATCGCTGCGGGAGCTTCTCCGATCGGCTCCGG
JMFS165F11+           CTACTCCAAACCACACAGGTTCCATCAAATCGCTGCGGGAGCTTCTCCGATCGGCTCCGG
JMFS027D05+           CTACTCCAAACCACACAGGTTCCATCAAATCGCTGCGGGAGCTTCTCCGATCGGCTCCGG
JMFS103E12+           CTACTCCAAACCACACAGGTTCCATCAAATCGCTGCGGGAGCTTCTCCGATCGGCTCCGG
                      ____________________________________________________________
consensus             CTACTCCAAACCACACAGGTTCCATCAAATCGCTGCGGGAGCTTCTCCGATCGGCTCCGG
 
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JMFS036G09+           CTCGACAAAAACTCGCCGACTCTTCCGCATTACGAACAAATAATTGGTAATAAATATACC
JMFS097B05+           CTCGACAAAAACTCGCCGACTCTTCCGCATTACGAACAAATAATTGGTAATAAATATACC
JMFS165F11+           CTCGACAAAAACTCGCCGACTCTTCCGCATTACGAACAAATAATTGGTAATAAATATACC
JMFS027D05+           CTCGACAAAAACTCGCCGACTCTTCCGCATTACGAACAAATAATTGGTAATAAATATACC
JMFS103E12+           CTCGACAAAAACTCGCCGACTCTTCCGCATTACGAACAAATAATTGGTAATAAATATACC
                      ____________________________________________________________
consensus             CTCGACAAAAACTCGCCGACTCTTCCGCATTACGAACAAATAATTGGTAATAAATATACC
 
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JMFS036G09+           CAGAGGTTAAAAATCGAAGCTTT                                     
JMFS097B05+           CAGAGGTTAAAAATCGAAGCTTTTATCTATTACACAACAAAAAAGGGTCTGGGCATCCAA
JMFS165F11+           CAGAGGTTAAAAATCGAAGCTTTTATCTATTACACAACAAAAAAGGGTCTGGGCATCCAA
JMFS027D05+           CAGAGGTTAAAAATCGAAGCTTTTATCTATTACACAACAAAAAAGGGTCTGGGCATCCAA
JMFS103E12+           CAGAGGTTAAAAATCGAAGCTTTTATCTATTACACAACAAAAAAGGGTCTGGGCATCCAA
                      ____________________________________________________________
consensus             CAGAGGTTAAAAATCGAAGCTTTTATCTATTACACAACAAAAAAGGGTCTGGGCATCCAA
 
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JMFS097B05+           ATTTCGAAAAATGGGAGTTGTTCAAGTGGCTCAAGGCCTCGATTTCTCAGGCAATCGAAT
JMFS165F11+           ATTTCGAAAAATGGGAGTTGTTCAAGTGGCTCAAGGCCTCGATTTCTCAGGCAATCGAAT
JMFS027D05+           ATTTCGAAAAATGGGAGTTGTTCAAGTGGCTCAAGGCCTCGATTTCTCAGGCAATCGAAT
JMFS103E12+           ATTTCGAAAAATGGGAGTTGTTCAAGTGGCTCAAGGCCTCGATTTCTCAGGCAATCGAAT
                      ____________________________________________________________
consensus             ATTTCGAAAAATGGGAGTTGTTCAAGTGGCTCAAGGCCTCGATTTCTCAGGCAATCGAAT
 
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JMFS097B05+           CTGCTAGCTCT                                                 
JMFS165F11+           CTGCTAGCTCT                                                 
JMFS027D05+           CTGCTAGCTCTTCTTCCGCTACTGT-AACTCGCTTTTGTTTGTTTCTTT           
JMFS103E12+           CTGCTAGCTCTTCTTCCGCTACTGTGAACTCGCTTTTGTTTGTTTCTTTCTCTGTTTTTT
                      ____________________________________________________________
consensus             CTGCTAGCTCTTCTTCCGCTACTGTGAACTCGCTTTTGTTTGTTTCTTTCTCTGTTTTTT