Contig 004838:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS026A12Sequence553004838 (2)ref|XP_009600078.1|8e-115PREDICTED: uncharacterized protein LOC104095620 isoform X3 [Nicotiana tomentosi
JMFS099F11Sequence618004838 (2)ref|XP_009593298.1|341PREDICTED: uncharacterized protein LOC104089978 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS026A12+                   GCAATCCTGCCCTTGGTACAGNNAAGTAGCGAAGCAGCATGTGAGAAAGCTA
JMFS099F11+                                                     CAGCATGTGAGAAAGCTA
                      ____________________________________________________________
consensus                     GCAATCCTGCCCTTGGTACAGNNAAGTAGCGAAGCAGCATGTGAGAAAGCTA
 
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JMFS026A12+           CATCTGTCAATGAGGCAGGCAATGGACTAGAGGCTACATCAGCTGCAAAAGTTCGTCTAT
JMFS099F11+           CATCTGTCAATGAGGCAGGCAATGGACTAGAGGCTACATCAGCTGCAAAAGTTCGTCTAT
                      ____________________________________________________________
consensus             CATCTGTCAATGAGGCAGGCAATGGACTAGAGGCTACATCAGCTGCAAAAGTTCGTCTAT
 
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JMFS026A12+           GAACTTCCCTCAAAGCATGCAGAGAAAGTTGCCAAAGGAGTTCAACAAATCTTGGTCCAC
JMFS099F11+           GAACTTCCCTCAAAGCATGCAGAGAAAGTTGCCAAAGGAGTTCAACAAATCTTGGTCCAC
                      ____________________________________________________________
consensus             GAACTTCCCTCAAAGCATGCAGAGAAAGTTGCCAAAGGAGTTCAACAAATCTTGGTCCAC
 
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JMFS026A12+           AACATGTGGCAAGAGACGATACCCTCGAATTGCTCCTCGGTAGTGCCCCTTGCGATTCCA
JMFS099F11+           AACATGTGGCAAGAGACGATACCCTCGAATTGCTCCTCGGTAGTGCCCCTTGCGATTCCA
                      ____________________________________________________________
consensus             AACATGTGGCAAGAGACGATACCCTCGAATTGCTCCTCGGTAGTGCCCCTTGCGATTCCA
 
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JMFS026A12+           ACTCACTTATAATTCCTTGTACGACCTTGCGGAAATCGCGAGACTGCGCTGAATCGAAAA
JMFS099F11+           ACTCACTTATAATTCCTTGTACGACCTTGCGGAAATCGCGAGACTGCGCTGAATCGAAAA
                      ____________________________________________________________
consensus             ACTCACTTATAATTCCTTGTACGACCTTGCGGAAATCGCGAGACTGCGCTGAATCGAAAA
 
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JMFS026A12+           TTGGCCATACCTTATCAAAGTCTTTAGCGGATTGAGTTGGGCCTCTAAGAGAGGATAAGA
JMFS099F11+           TTGGCCATACCTTATCAAAGTCTTTAGCGGATTGAGTTGGGCCTCTAAGAGAGGATAAGA
                      ____________________________________________________________
consensus             TTGGCCATACCTTATCAAAGTCTTTAGCGGATTGAGTTGGGCCTCTAAGAGAGGATAAGA
 
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JMFS026A12+           TGAAGTAGAGAAGCTGTTCGCCCAATTTAGGGTTGGAGTGGCGGAAGAGCCCGACTCGAG
JMFS099F11+           TGAAGTAGAGAAGCTGTTCGCCCAATTTAGGGTTGGAGTGGCGGAAGAGCCCGACTCGAG
                      ____________________________________________________________
consensus             TGAAGTAGAGAAGCTGTTCGCCCAATTTAGGGTTGGAGTGGCGGAAGAGCCCGACTCGAG
 
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JMFS026A12+           GCGTGCCGTTGCCGGCTCCGATACCGATGATCGACGGATCCAATCCTAACAACAAACAGT
JMFS099F11+           GCGTGCCGTTGCCGGCTCCGATACCGATGATCGACGGATCCAATCCTAACAACAAACAGT
                      ____________________________________________________________
consensus             GCGTGCCGTTGCCGGCTCCGATACCGATGATCGACGGATCCAATCCTAACAACAAACAGT
 
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JMFS026A12+           TGGTGTACATTGCACTCTCCAGCTCAATCTCTCTTTCCTTCTCACGGTCCATCGTCATTC
JMFS099F11+           TGGTGTACATTGCACTCTCCAGCTCAATCTCTCTTTCCTTCTCACGGTCCATCGTCATTC
                      ____________________________________________________________
consensus             TGGTGTACATTGCACTCTCCAGCTCAATCTCTCTTTCCTTCTCACGGTCCATCGTCATTC
 
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JMFS026A12+           CACCTTCCACTCTCCCTCTCC                                       
JMFS099F11+           CACCTTCCACTCTCCCTCTCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus             CACCTTCCACTCTCCCTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
 
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JMFS099F11+           XXXXXXXXXXXXXXXXXGCAATTTTGTGTTCCTCTCTCTCTCTCTAAAGTTTGGTTTCCA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNGCAATTTTGTGTTCCTCTCTCTCTCTCTAAAGTTTGGTTTCCA