Contig 004829:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS091F12Sequence627004829 (2)ref|XP_009772086.1|4e-57PREDICTED: uncharacterized protein LOC104222546 isoform X1 [Nicotiana sylvestri
JMSF004C03Sequence335002066 (2)ref|XP_009787377.1|3e-06PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X1 [Nicotiana syl366004829 (2)ref|XP_009772086.1|8e-21PREDICTED: uncharacterized protein LOC104222546 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF004C03-                        AAACCATTAAGTGTATACAACAATCATCTAACTGCATCAACTATTT
                      ____________________________________________________________
consensus                           AAACCATTAAGTGTATACAACAATCATCTAACTGCATCAACTATTT
 
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rJMSF004C03-          TACAACCATGGAGAAAAACACTTCTTTCTCTTCACGTATATAAGCAATATCATGTTTCGG
                      ____________________________________________________________
consensus             TACAACCATGGAGAAAAACACTTCTTTCTCTTCACGTATATAAGCAATATCATGTTTCGG
 
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rJMSF004C03-          ACCACCACANTTCCTGGGCATCTGGGAACAGTCTGATGAACATNCTATAACAATACAAGA
                      ____________________________________________________________
consensus             ACCACCACANTTCCTGGGCATCTGGGAACAGTCTGATGAACATNCTATAACAATACAAGA
 
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rJMSF004C03-          CCCTCAATGAGAAACACCTAGTCTCTAGGGGTTNTGTAAAATGGTGCGACAATTGTGAAC
                      ____________________________________________________________
consensus             CCCTCAATGAGAAACACCTAGTCTCTAGGGGTTNTGTAAAATGGTGCGACAATTGTGAAC
 
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rJMSF004C03-          TTTCTGACTTCATCATCTCCTCCGAGCTCACGCAGATCNNAGAATGCANACTGAGTCATC
JMFS091F12+                                                   AGAATGCAAACTGAGTCATC
                      ____________________________________________________________
consensus             TTTCTGACTTCATCATCTCCTCCGAGCTCACGCAGATCNNAGAATGCAAACTGAGTCATC
 
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rJMSF004C03-          TTCNCTTCTAGACTCATTTTTATCCAGAGCCTCTTCTCGACTGANNCATTATGAACTGTG
JMFS091F12+           TTCTCTTCTAGACTCATTTTTATCCAGAGCCTCTTCTCGACTGAGACATTATGAACTGTG
                      ____________________________________________________________
consensus             TTCTCTTCTAGACTCATTTTTATCCAGAGCCTCTTCTCGACTGAGACATTATGAACTGTG
 
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rJMSF004C03-          ATTGCAAGGG                                                  
JMFS091F12+           ATTGCAAGGGATATACCAACAGGTAGCCCCGGAATGAATGGAAGAGGATTTTGAAAGTCA
                      ____________________________________________________________
consensus             ATTGCAAGGGATATACCAACAGGTAGCCCCGGAATGAATGGAAGAGGATTTTGAAAGTCA
 
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JMFS091F12+           GTGCCTTGAACATCCATTTCAGCCTCAATGTATTTGAGCTTTCCTGGTAAAACTAACTGT
                      ____________________________________________________________
consensus             GTGCCTTGAACATCCATTTCAGCCTCAATGTATTTGAGCTTTCCTGGTAAAACTAACTGT
 
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JMFS091F12+           CTCAGTTTGAATTGCTTGAGTGAGGACAGAAGCGAAAATGGATTCTCCATGGTCGCACTG
                      ____________________________________________________________
consensus             CTCAGTTTGAATTGCTTGAGTGAGGACAGAAGCGAAAATGGATTCTCCATGGTCGCACTG
 
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JMFS091F12+           CCTGACATATTGATCTCATTCAGTGCCTTCTGAAGTTCTGTGACAAAACTAGAAAGTGAA
                      ____________________________________________________________
consensus             CCTGACATATTGATCTCATTCAGTGCCTTCTGAAGTTCTGTGACAAAACTAGAAAGTGAA
 
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JMFS091F12+           ATTGATCCTTCTTCATGAAGTTGCTGCGCCAAGGAAACACTGGAATGTAATTTCTTCGTA
                      ____________________________________________________________
consensus             ATTGATCCTTCTTCATGAAGTTGCTGCGCCAAGGAAACACTGGAATGTAATTTCTTCGTA
 
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JMFS091F12+           GTATTATATTGACAACCGGCTTCTAATTTACACAGCTTTGCTGTATCAGCCACAAGCTTC
                      ____________________________________________________________
consensus             GTATTATATTGACAACCGGCTTCTAATTTACACAGCTTTGCTGTATCAGCCACAAGCTTC
 
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JMFS091F12+           AGCTCCAAGACATGAAACTCATCCTCTTTTGTCAATCCTATGAACCTATACCTCATCTCT
                      ____________________________________________________________
consensus             AGCTCCAAGACATGAAACTCATCCTCTTTTGTCAATCCTATGAACCTATACCTCATCTCT
 
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JMFS091F12+           TTTAGGATCATGTCAAGGTTTTCAAACAATAGTCGCCAGTCTCCCATTTGGTAGGAGTAG
                      ____________________________________________________________
consensus             TTTAGGATCATGTCAAGGTTTTCAAACAATAGTCGCCAGTCTCCCATTTGGTAGGAGTAG
 
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JMFS091F12+           AACTTTCTTGGAAATATTAAGCGTGCCCACAACCTTCCAAGCAACTCTATGGCATCCAAA
                      ____________________________________________________________
consensus             AACTTTCTTGGAAATATTAAGCGTGCCCACAACCTTCCAAGCAACTCTATGGCATCCAAA