Contig 004828:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS077A03Sequence626004828 (4)emb|CDP00856.1|3e-62unnamed protein product [Coffea canephora]
JMFS091E02Sequence642004828 (4)emb|CDP00856.1|8e-58unnamed protein product [Coffea canephora]
JMFS104E08Sequence621004828 (4)emb|CDP00856.1|5e-60unnamed protein product [Coffea canephora]
JMFS118H12Sequence627004828 (4)emb|CDP00856.1|7e-61unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS077A03+                               ACCAATTTCAAAGGTGGTGCTGTACTTGTTCGAAGCTTCA
JMFS118H12+                                           GGTGGTGCTGTACTTGTTCGAAGCTTCA
JMFS104E08+                                           GGTGGTGCTGTACTTGTTCGAAGCTTCA
JMFS091E02+                                                         TGTTCGAAGCTTCA
                      ____________________________________________________________
consensus                                 ACCAATTTCAAAGGTGGTGCTGTACTTGTTCGAAGCTTCA
 
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JMFS077A03+           GATATATCTCATTCCGACTCTTGCTTGAAATTTTGCTTAGTCTATCCTGTAAAGAATGCC
JMFS118H12+           GATATATCTCATTCCGACTCTTGCTTGAAATTTTGCTTAGTCTATCCTGTAAAGAATGCC
JMFS104E08+           GATATATCTCATTCCGACTCTTGCTTGAAATTNTGCTTAGTCTATCCTGTAAAGAATGCC
JMFS091E02+           GATATATCTCATTCCGACTCTTGCTTGAAATTTTGCTTAGTCTATCCTGTAAAGAATGCC
                      ____________________________________________________________
consensus             GATATATCTCATTCCGACTCTTGCTTGAAATTTTGCTTAGTCTATCCTGTAAAGAATGCC
 
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JMFS077A03+           TAAGAGCACTTGCAGATACTTGTTGAGGTTTACTGTCAATCTGCAACACTATTGATTTGC
JMFS118H12+           TAAGAGCACTTGCAGATACTTGTTGAGGTTTACTGTCAATCTGCAACACTATTGATTTGC
JMFS104E08+           TAAGAGCACTTGCAGATACTTGTTGAGGTTTACTGTCAATCTGCAACACTATTGATTTGC
JMFS091E02+           TAAGAGCACTTGCAGATACTTGTTGAGGTTTACTGTCAATCTGCAACACTATTGATTTGC
                      ____________________________________________________________
consensus             TAAGAGCACTTGCAGATACTTGTTGAGGTTTACTGTCAATCTGCAACACTATTGATTTGC
 
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JMFS077A03+           TGCTCAAAGAACTATCTCTTTTGAGATCAATACATATGGGGGCACGAGTAGCACCACCTT
JMFS118H12+           TGCTCAAAGAACTATCTCTTTTGAGATCAATACATATGGGGGCACGAGTAGCACCACCTT
JMFS104E08+           TGCTCAAAGAACTATCTCTTTTGAGATCAATACATATGGGGGCACGAGTAGCACCACCTT
JMFS091E02+           TGCTCAAAGAACTATCTCTTTTGAGATCAATACATATGGGGGCACGAGTAGCACCACCTT
                      ____________________________________________________________
consensus             TGCTCAAAGAACTATCTCTTTTGAGATCAATACATATGGGGGCACGAGTAGCACCACCTT
 
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JMFS077A03+           CACCAGTTGGCAAAGCAGGATGCCCAATTAGACTATTTAATACAGCTGATTTACCGGCAC
JMFS118H12+           CACCAGTTGGCAAAGCAGGATGCCCAATTAGACTATTTAATACAGCTGATTTACCGGCAC
JMFS104E08+           CACCAGTTGGCAAAGCAGGATGCCCAATTAGACTATTTAATACAGCTGATTTACCGGCAC
JMFS091E02+           CACCAGTTGGCAAAGCAGGATGCCCAATTAGACTATTTAATACAGCTGATTTACCGGCAC
                      ____________________________________________________________
consensus             CACCAGTTGGCAAAGCAGGATGCCCAATTAGACTATTTAATACAGCTGATTTACCGGCAC
 
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JMFS077A03+           CAGTGTTTCCGAGAGCAACGACATTGAGGAAAGTCGACGGCCGCTTGGAAGAGGAGGAGG
JMFS118H12+           CAGTGTTTCCGAGAGCAACGACATTGAGGAAAGTCGACGGCCGCTTGGAAGAGGAGGAGG
JMFS104E08+           CAGTGTTTCCGAGAGCAACGACATTGAGGAAAGTCGACGGCCGCTTGGAAGAGGAGGAGG
JMFS091E02+           CAGTGTTTCCGAGAGCAACGACATTGAGGAAAGTCGACGGCCGCTTGGAAGAGGAGGAGG
                      ____________________________________________________________
consensus             CAGTGTTTCCGAGAGCAACGACATTGAGGAAAGTCGACGGCCGCTTGGAAGAGGAGGAGG
 
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JMFS077A03+           AGGAGGTCTCATCTATGTCTTCGTCGGCAAGCAAAGCCGACGCCTGCCTCATCGACTCGG
JMFS118H12+           AGGAGGTCTCATCTATGTCTTCGTCGGCAAGCAAAGCCGACGCCTGCCTCATCGACTCGG
JMFS104E08+           AGGAGGTCTCATCTATGTCTTCGTCGGCAAGCAAAGCCGACGCCTGCCTCATCGACTCGG
JMFS091E02+           AGGAGGTCTCATCTATGTCTTCGTCGGCAAGCAAAGCCGACGCCTGCCTCATCGACTCGG
                      ____________________________________________________________
consensus             AGGAGGTCTCATCTATGTCTTCGTCGGCAAGCAAAGCCGACGCCTGCCTCATCGACTCGG
 
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JMFS077A03+           ACAGCTCCGACAACTCCTCGATCGCATCCATCCTTCTAGAATCTACTCAGCAGCTCCAAC
JMFS118H12+           ACAGCTCCGACAACTCCTCGATCGCATCCATCCTTCTAGAATCTACTCAGCAGCTCCAAC
JMFS104E08+           ACAGCTCCGACAACTCCTCGATCGCATCCATCCTTCTAGAATCTACTCAGCAGCTCCAAC
JMFS091E02+           ACAGCTCCGACAACTCCTCGATCGCATCCATCCTTCTAGAATCTACTCAGCAGCTCCAAC
                      ____________________________________________________________
consensus             ACAGCTCCGACAACTCCTCGATCGCATCCATCCTTCTAGAATCTACTCAGCAGCTCCAAC
 
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JMFS077A03+           CAAACCGCAACTCAGCAGATCGCAACCAATCTCGGAGATCGAGCGTGGATATAGGCAGAA
JMFS118H12+           CAAACCGCAACTCAGCAGATCGCAACCAATCTCGGAGATCGAGCGTGGATATAGGCAGAA
JMFS104E08+           CAAACCGCAACTCAGCAGATCGCAACCAATCTCGGAGATCGAGCGTGGATATAGGCAGAA
JMFS091E02+           CAAACCGCAACTCAGCAGATCGCAACCAATCTCGGAGATCGAGCGTGGATATAGGCAGAA
                      ____________________________________________________________
consensus             CAAACCGCAACTCAGCAGATCGCAACCAATCTCGGAGATCGAGCGTGGATATAGGCAGAA
 
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JMFS077A03+           AGGAAGAAACCTAGATTCTGGGAGGGAATATTGGGCGAGGATCTTCCGGTGGAAGGTCGG
JMFS118H12+           AGGAAGAAACCTAGATTCTGGGAGGGAATATTGGGCGAGGATCTTCCGGTGGAAGGTCGG
JMFS104E08+           AGGAAGAAACCTAGATTCTGGGAGGGAATATTGGGCGAGGATCTTCCGGTGGAAGGTCGG
JMFS091E02+           AGGAAGAAACCTAGATTCTGGGAGGGAATATTGGGCGAGGATCTTCCGGTGGAAGGTCGG
                      ____________________________________________________________
consensus             AGGAAGAAACCTAGATTCTGGGAGGGAATATTGGGCGAGGATCTTCCGGTGGAAGGTCGG
 
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JMFS077A03+           TCGGAGATTCAGGGAGCTTGAAAAGTTTGAAAAATTTTAGAGAGAG              
JMFS118H12+           TCGGAGATTCAGGGAGCTTGAAAAGTTTGAAAAATTTTAGAGAGAGAAAGTGA       
JMFS104E08+           TCGGAGATTCAGGGAGCTTGAAAAGTTTGAAAAATTTTAGAGAGAGAAAGTGA       
JMFS091E02+           TCGGAGATTCAGGGAGCTTGAAAAGTTTGAAAAATTTTAGAGAGAGAAAGTGAGGAAACG
                      ____________________________________________________________
consensus             TCGGAGATTCAGGGAGCTTGAAAAGTTTGAAAAATTTTAGAGAGAGAAAGTGAGGAAACG