Contig 004824:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS084A10Sequence624004824 (2)gb|EYU33547.1|4e-49hypothetical protein MIMGU_mgv1a005710mg [Erythranthe guttata]
JMSF051E06Sequence724004824 (2)ref|XP_004245769.1|2e-112PREDICTED: uncharacterized protein LOC101256403 isoform X1 [Solanum lycopersicu774023655ref|XP_006355449.1|5e-40PREDICTED: uncharacterized protein LOC102595024 isoform X5 [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+                                                                   ANGG
                      ____________________________________________________________
consensus                                                                     ANGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           CCAGATTTCATGTCAGACAACCGTGGCTCAGCATTCCATCCATCAGTCCTGTAAGCACCC
                      ____________________________________________________________
consensus             CCAGATTTCATGTCAGACAACCGTGGCTCAGCATTCCATCCATCAGTCCTGTAAGCACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           CTACTTTGACTATGACCATCACGTGAATTGTATGAGTTGGCCAAAAAAGACCGACGAGCT
                      ____________________________________________________________
consensus             CTACTTTGACTATGACCATCACGTGAATTGTATGAGTTGGCCAAAAAAGACCGACGAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           GGAGACCTTGAGTGGGTTGAACGTCCTCTAGCTCCATCACTACCATAAGCTCTTGCTTGG
                      ____________________________________________________________
consensus             GGAGACCTTGAGTGGGTTGAACGTCCTCTAGCTCCATCACTACCATAAGCTCTTGCTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           GGAGAACCCCTTGAAATGTTTTGTACATCTTCATGAAAACGGTCTTCGATGATCTTCTCT
                      ____________________________________________________________
consensus             GGAGAACCCCTTGAAATGTTTTGTACATCTTCATGAAAACGGTCTTCGATGATCTTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           TGCCTGGCAGACCTGGGATGGAACTGAGAGGGTCTATGCGGGCTGTGATTAGATCTCTGC
                      ____________________________________________________________
consensus             TGCCTGGCAGACCTGGGATGGAACTGAGAGGGTCTATGCGGGCTGTGATTAGATCTCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           AATTCAGAGTGTACAATACGAGAGCTAACAGGACTTCGGTGCTCAGGTGTCCTGGACATG
                      ____________________________________________________________
consensus             AATTCAGAGTGTACAATACGAGAGCTAACAGGACTTCGGTGCTCAGGTGTCCTGGACATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           GAAATGTGAGAGCTGGAAGATGCTTTTTTCTCACCCTCTTCTTTTACTTTGTGAACAGCA
                      ____________________________________________________________
consensus             GAAATGTGAGAGCTGGAAGATGCTTTTTTCTCACCCTCTTCTTTTACTTTGTGAACAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           TCCACACCCTTTTTCAAAATCAACCTGTCCTTCCCACTGACTATAATAAATTTCTCCTCA
                      ____________________________________________________________
consensus             TCCACACCCTTTTTCAAAATCAACCTGTCCTTCCCACTGACTATAATAAATTTCTCCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           ATTTTAATCTTGCAACCAATATCCTTCTCAATCTGAGTTACCACTTTCTCAGTGAACAAG
                      ____________________________________________________________
consensus             ATTTTAATCTTGCAACCAATATCCTTCTCAATCTGAGTTACCACTTTCTCAGTGAACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           GCTTTCACATGATTTTCCCTAGCAGGCACTCTCTCAAAAAAATCTTGAGACTTTCGATTA
                      ____________________________________________________________
consensus             GCTTTCACATGATTTTCCCTAGCAGGCACTCTCTCAAAAAAATCTTGAGACTTTCGATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           GCTCCAAGCGTTGATGGACAGCCCTGTGTAAAGTGTCCAGACTCTCCACATATTTTGCAA
JMFS084A10+                                 CCTGTGTAAAGTGTCCAGACTCTCCACATATTTTGCAA
                      ____________________________________________________________
consensus             GCTCCAAGCGTTGATGGACAGCCCTGTGTAAAGTGTCCAGACTCTCCACATATTTTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051E06+           ATCAATTCTTCCTCCTTCCTTTTCTTCCAGTTTCTCTCAGTTGCTTTGGATTTAGCTTC 
JMFS084A10+           ATCAATTCTTCCTCCTTCCTTTTCTTCCAGTTTCTCTCAGTTGCTTTGGATTTAGCTTCC
                      ____________________________________________________________
consensus             ATCAATTCTTCCTCCTTCCTTTTCTTCCAGTTTCTCTCAGTTGCTTTGGATTTAGCTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           CAAACCTTTGCTTCTCGGCTAGTAAAATCAGTAGGAACAGCATTTGGGTCACGTGCCTCT
                      ____________________________________________________________
consensus             CAAACCTTTGCTTCTCGGCTAGTAAAATCAGTAGGAACAGCATTTGGGTCACGTGCCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           TCTTCCTCATCAGAACCAGTATGGGACCTTTTGTTTATTGTAGTAGTCCTTTCTTGTGCC
                      ____________________________________________________________
consensus             TCTTCCTCATCAGAACCAGTATGGGACCTTTTGTTTATTGTAGTAGTCCTTTCTTGTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           TTAGGAGCAGCAGATCCATGAGGACCAGTATATTCCTTGTATATTTCACTAAAATCATCA
                      ____________________________________________________________
consensus             TTAGGAGCAGCAGATCCATGAGGACCAGTATATTCCTTGTATATTTCACTAAAATCATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           TCAATATCCGAATCCTGCCTACCATCCATCTCAGAGTTATGCAAACACAGACCTTTCTCT
                      ____________________________________________________________
consensus             TCAATATCCGAATCCTGCCTACCATCCATCTCAGAGTTATGCAAACACAGACCTTTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           TTTGAAGAGTCTCGGAGTATCCGGAAGTCCGACGCTGAATCCCCCAAGGCCTAAAGCAGA
                      ____________________________________________________________
consensus             TTTGAAGAGTCTCGGAGTATCCGGAAGTCCGACGCTGAATCCCCCAAGGCCTAAAGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           AACCAGAAGATGTATATTGGTAGGGAGAAAGATAAAGGAGTGAGAGTCAGGAATGGAAGC
                      ____________________________________________________________
consensus             AACCAGAAGATGTATATTGGTAGGGAGAAAGATAAAGGAGTGAGAGTCAGGAATGGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084A10+           GTCGTGCGCTAGAGGCGAGGGCTAGGGTTTGACAGCGGAGGGAGATGAAGAAATATTGGA
                      ____________________________________________________________
consensus             GTCGTGCGCTAGAGGCGAGGGCTAGGGTTTGACAGCGGAGGGAGATGAAGAAATATTGGA