Contig 004818:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+                                                      CCCGGTGCATGGTAGAA
JMFS074E06+                            AGTAAACTGATTACCCTTTAAACCCTCCCGGTGCATTGTAGAA
                      ____________________________________________________________
consensus                              AGTAAACTGATTACCCTTTAAACCCTCCCGGTGCATTGTAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+           AACACCCCCAGAGCTTCTCCTGAGTCGCCATTCTTAGAATACCCGGACAACAGTGCAGTC
JMFS074E06+           AACACCCCCAAAGCTTCTCCTGAGTCACCATTCTTAGAATACCCCGACACCAACGCAGTC
                      ____________________________________________________________
consensus             AACACCCCCAGAGCTTCTCCTGAGTCGCCATTCTTAGAATACCCGGACACCAGTGCAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+           CAAGAAACCAAGTTTCGCTCAGGCATTTCGCCGAACACCTTGTGAGCGACTTCCATGTCA
JMFS074E06+           CAAGAAACCAAATTCCGCTCAGGCATTCTGTTGAACACCATGTGAGCGACTTCCATCTCA
                      ____________________________________________________________
consensus             CAAGAAACCAAGTTTCGCTCAGGCATTTTGTTGAACACCTTGTGAGCGACTTCCATGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+           CCAAACTTCGAATAGAATATGATCAGCTTGTTGTTCAGGTGTATGTTAGTGGGAAAATTA
JMFS074E06+           CCAAACTTCGAATAGAATATGATCAGCTTGTTGTTCAGGTGTATGCTCGACGGAAAATCA
                      ____________________________________________________________
consensus             CCAAACTTCGAATAGAATATGATCAGCTTGTTGTTCAGGTGTATGTTCGTGGGAAAATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+           TTTTTTATCAAATAGGCGTGAATCAAATGGCCATGGCATTT---------GTCGATACAA
JMFS074E06+           TTTTTTATCAAATGGGCATGAATCAAATGGCCATGGCTTTTGGCCTTTAGGTCGATACAA
                      ____________________________________________________________
consensus             TTTTTTATCAAATGGGCGTGAATCAAATGGCCATGGCTTTTGGCCTTTAGGTCGATACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+           AGATCAAGAAGTTTCGAGTACACAGTGTAGTCTGCTCCGGTTGGGTTCTGGAGGATAAGT
JMFS074E06+           AGATCAAGAAGTTTCGAGTACAGAGAATAGTCTGCTCCGGTTGGGTTGTGGAAGATGAGT
                      ____________________________________________________________
consensus             AGATCAAGAAGTTTCGAGTACAGAGTGTAGTCTGCTCCGGTTGGGTTGTGGAGGATGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018N18+           GCCAGAGCTTCCCTAAGCCTCTTGGCATGACAGAGAGATTCAA                 
JMFS074E06+           GCCAAGGCTTCCCTAAGCCTCTTGGCATTGCAGAGAGATTCAACTTCAAAGTTCGAACAA
                      ____________________________________________________________
consensus             GCCAGGGCTTCCCTAAGCCTCTTGGCATTGCAGAGAGATTCAACTTCAAAGTTCGAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS074E06+           TGGCGAGCCTGGAAGCGGGGCAGGTGGTCGGCAGGCTCGGCGCTGTCGCAGGGGAGAGGC
                      ____________________________________________________________
consensus             TGGCGAGCCTGGAAGCGGGGCAGGTGGTCGGCAGGCTCGGCGCTGTCGCAGGGGAGAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS074E06+           GGCCACCGGATTCGCAGGGCGTGGAGCAGTGGATTGTGGAGGTAATGCCACTACTTCTTT
                      ____________________________________________________________
consensus             GGCCACCGGATTCGCAGGGCGTGGAGCAGTGGATTGTGGAGGTAATGCCACTACTTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS074E06+           ATTAAGTACTACGCAGTATAAAATAATAAGCTCATTTTCAGTATCAAAGTTTTGATTAGC
                      ____________________________________________________________
consensus             ATTAAGTACTACGCAGTATAAAATAATAAGCTCATTTTCAGTATCAAAGTTTTGATTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS074E06+           CTTTTGGAATTCCGTTGTAGTGGTAACTAATTTATTGTCTTTTGAGAATTTGTTTTCGAC
                      ____________________________________________________________
consensus             CTTTTGGAATTCCGTTGTAGTGGTAACTAATTTATTGTCTTTTGAGAATTTGTTTTCGAC