Contig 004812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS071E03Sequence643004812 (3)ref|XP_006357406.1|3e-56PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMFS153A09Sequence326004812 (3)ref|XP_002272769.1|3e-11PREDICTED: subtilisin-like protease [Vitis vinifera]
JMFS153B11Sequence326004812 (3)ref|XP_002272769.1|3e-11PREDICTED: subtilisin-like protease [Vitis vinifera]

Alignment

This contig is upended


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JMFS071E03+                         GTTCTAGTTCTAGTAGCAGCTTGGTAGCCGGAGTAATAAAAACGAG
                      ____________________________________________________________
consensus                           GTTCTAGTTCTAGTAGCAGCTTGGTAGCCGGAGTAATAAAAACGAG
 
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JMFS071E03+           CACCAACGATTTTATTATTACACGAAGTCGCCGGAAAATCTGGACCCGCCTGGCACTTGC
                      ____________________________________________________________
consensus             CACCAACGATTTTATTATTACACGAAGTCGCCGGAAAATCTGGACCCGCCTGGCACTTGC
 
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JMFS071E03+           TCAGCCAACTATCACGCCTGGGAGATAGACCCTCGTCGGAGAAGCTACGCCTTTCCGGCC
                      ____________________________________________________________
consensus             TCAGCCAACTATCACGCCTGGGAGATAGACCCTCGTCGGAGAAGCTACGCCTTTCCGGCC
 
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JMFS071E03+           AGATTCCTGTGTCCAGAACACCCACTATATAACCGTCTCCGTAATCAGAGCGGTGCCAGA
                      ____________________________________________________________
consensus             AGATTCCTGTGTCCAGAACACCCACTATATAACCGTCTCCGTAATCAGAGCGGTGCCAGA
 
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JMFS071E03+           GACCAGATAGGTCACTGTCACTTAATCCTAAGAATTCAGGGGACAAAGTGGTCTGGAGCT
                      ____________________________________________________________
consensus             GACCAGATAGGTCACTGTCACTTAATCCTAAGAATTCAGGGGACAAAGTGGTCTGGAGCT
 
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JMFS153B11+                                                          AGTTCAGACGCTT
JMFS153A09+                                                          AGTTCAGACGCTT
JMFS071E03+           GGTGGAGGTGATCCGGAAGGACAGAGATCACGCCCGGAACATTTCGCAGTTCAGAAGCTT
                      ____________________________________________________________
consensus             GGTGGAGGTGATCCGGAAGGACAGAGATCACGCCCGGAACATTTCGCAGTTCAGACGCTT
 
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JMFS153B11+           GGGAGGGCGTGAGTCGTGCAGAAAAACCATGGGCAACACGGTCATAGGTGTACACGAGCT
JMFS153A09+           GGGAGGGCGTGAGTCGTGCAGAAAAACCATGGGCAACACGGTCATAGGTGTACACGAGCT
JMFS071E03+           GGGAGGGCGTGAGGCTTGCAGAAAAACCATGGGCAACACGTTCATAGGTGTACAAGAGCT
                      ____________________________________________________________
consensus             GGGAGGGCGTGAGTCGTGCAGAAAAACCATGGGCAACACGGTCATAGGTGTACACGAGCT
 
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JMFS153B11+           CAGATGATGAGTGGCTAGAGAGAGGGGAAAGTGAACGAATGATGGATGAATACCAGTGAT
JMFS153A09+           CAGATGATGAGTGGCTAGAGAGAGGGGAAAGTGAACGAATGATGGATGAATACCAGTGAT
JMFS071E03+           CA---GATGAGTGGTTAGAGAGAGGGGAAAGTGAATGAATGATGGATGAATACCAGTGAT
                      ____________________________________________________________
consensus             CAGATGATGAGTGGCTAGAGAGAGGGGAAAGTGAACGAATGATGGATGAATACCAGTGAT
 
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JMFS153B11+           GATGGGTGGAGAAAGCCTGGGGTTTCTTAGATTTGGACATGAAAACGATGAAGCTC    
JMFS153A09+           GATGGGTGGAGAAAGCCTGGGGTTTCTTAGATTTGGACATGAAAACGATGAAGCTC    
JMFS071E03+           GATGGGTGGAGAAAGTCTCAGGTTTCTTAGATTTCATCATGAAAACGATAAAGCTCTCCG
                      ____________________________________________________________
consensus             GATGGGTGGAGAAAGCCTGGGGTTTCTTAGATTTGGACATGAAAACGATGAAGCTCTCCG
 
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JMFS071E03+           GTTCCTCCTCTTCTACTGAAACTACAGTAGAAGAACAAACCCTGCAGACTGAAAGGAGAC
                      ____________________________________________________________
consensus             GTTCCTCCTCTTCTACTGAAACTACAGTAGAAGAACAAACCCTGCAGACTGAAAGGAGAC
 
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JMFS071E03+           TACATAATAACAATAAGAATACAAACAGAAAGGAGGAAGGGAGGGAAGGAACAGCCATTG
                      ____________________________________________________________
consensus             TACATAATAACAATAAGAATACAAACAGAAAGGAGGAAGGGAGGGAAGGAACAGCCATTG