| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002D15 | Sequence | 320 | 004803 (6) | 765 | 008396 (6) | ref|XP_006350963.1| | 1e-45 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu | |||
| JMFF014J08 | Sequence | 541 | 004803 (6) | ref|XP_006350963.1| | 1e-13 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu | 642 | 008396 (6) | ref|XP_006350963.1| | 2e-34 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu |
| JMFF017L02 | Sequence | 531 | 004803 (6) | 701 | 008396 (6) | ref|XP_006350963.1| | 3e-38 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu | |||
| JMFF025C23 | Sequence | 578 | 004803 (6) | ref|XP_006350963.1| | 1e-11 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu | 614 | 008396 (6) | ref|XP_006350963.1| | 1e-26 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu |
| JMFF050M19 | Sequence | 575 | 004803 (6) | ref|XP_006350963.1| | 5e-14 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu | 604 | 008396 (6) | ref|XP_009625680.1| | 2e-29 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Nicotiana tomen |
| JMFS061E08 | Sequence | 600 | 004803 (6) | ref|XP_006350963.1| | 9e-09 | PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum tu | |||||
This contig is upended
. : . : . : . : . : . :
JMFF050M19+ CTCT
____________________________________________________________
consensus CTCT
. : . : . : . : . : . :
JMFF014J08+ GAGAATCCAAACTACCACCCACAAATCGAGGATGTAG
JMFF050M19+ GNGCATCATCCAACTTCNCCGTGGAGAATCCAAACTACCACCCACAAATCGAGGATGTAG
JMFF025C23+ AATCGAGGATGTAG
____________________________________________________________
consensus GNGCATCATCCAACTTCNCCGTGGAGAATCCAAACTACCACCCACAAATCGAGGATGTAG
. : . : . : . : . : . :
JMFF014J08+ AGGTGACGGTGTGGTAGTAGGTGCTCTCGATCTAACAGGGCTTCGAGATAGCGGGCTCAT
JMFF050M19+ AGGTGACGGTGTGGTAGTAGGTGCTCTCGATCTAACAGGGCTTCGAGATAGCGGGCTCAT
JMFF025C23+ AGGTGACGGTGTGGTAGTAGGTGCTCTCGATCTAACAGGGCTTCGAGATAGCGGGCTCAT
JMFS061E08+ AGGTGACGGTGTGGTAGTAGGTGCTCTCGATCTAACAGGGCTTCGAGATAGCGGGCTCAT
____________________________________________________________
consensus AGGTGACGGTGTGGTAGTAGGTGCTCTCGATCTAACAGGGCTTCGAGATAGCGGGCTCAT
. : . : . : . : . : . :
JMFF014J08+ CCTGTTGTCCCCAGCTCCTCTGAAAGAAGACGGTTGAGCATGATCGGGGTGGGGATGATC
JMFF050M19+ CCTGTTGTCCCCAGCTCCTCTGAAAGAAGACGGTTGAGCATGATCGGGGTGGGGATGATC
JMFF025C23+ CCTGTTGTCCCCAGCTCCTCTGAAAGAAGACGGTTGAGCATGATCGGGGTGGGGATGATC
JMFF017L02+ GTTGTCCCCAGCTCCTCTGAAAGAAGACGGTTGAGCATGATCGGGGTGGGGATGATC
JMFS061E08+ CCTGTTGTCCCCAGCTCCTCTGAAAGAAGACGGTTGAGCATGATCGGGGTGGGGATGATC
____________________________________________________________
consensus CCTGTTGTCCCCAGCTCCTCTGAAAGAAGACGGTTGAGCATGATCGGGGTGGGGATGATC
. : . : . : . : . : . :
JMFF014J08+ ATCATAGGAGCCAGTAGAGCTAACGCTGGATCCCGACTCCGACCCAGATCCCAATCCAAT
JMFF050M19+ ATCATAGGAGCCAGTAGAGCTAACGCTGGATCCCGACTCCGACCCAGATCCCAATCCAAT
JMFF025C23+ ATCATAGGAGCCAGTAGAGCTAACGCTGGATCCCGACTCCGACCCAGATCCCAATCCAAT
JMFF017L02+ ATCATAGGAGCCAGTAGAGCTAACGCTGGATCCCGACTCCGACCCAGATCCCAATCCAAT
JMFS061E08+ ATCATAGGAGCCAGTAGAGCTAACGCTGGATCCCGACTCCGACCCAGATCCCAATCCAAT
____________________________________________________________
consensus ATCATAGGAGCCAGTAGAGCTAACGCTGGATCCCGACTCCGACCCAGATCCCAATCCAAT
. : . : . : . : . : . :
JMFF014J08+ CCCATGTTCATTCGACGGCGTCGGCAGTGGAAGCGGTTTATCAGACGAAGCCGAATCGAA
JMFF050M19+ CCCATGTTCATTCGACGGCGTCGGCAGTGGAAGCGGTTTATCAGACGAAGCCGAATCGAA
JMFF025C23+ CCCATGTTCATTCGACGGCGTCGGCAGTGGAAGCGGTTTATCAGACGAAGCCGAATCGAA
JMFF017L02+ CCCATGTTCATTCGACGGCGTCGGCAGTGGAAACGGTTTATCAGACGAAGCCGAATCGAA
JMFF002D15+ GACGGCGTCGGCAGTGGAAGCGGTTTATCAGACGAAGCCGAATCGAA
JMFS061E08+ CCCATGTTCATTCGACGGCGTCGGCAGTGGAAGCGGTTTATCAGACGAAGCCGAATCGAA
____________________________________________________________
consensus CCCATGTTCATTCGACGGCGTCGGCAGTGGAAGCGGTTTATCAGACGAAGCCGAATCGAA
. : . : . : . : . : . :
JMFF014J08+ ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
JMFF050M19+ ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
JMFF025C23+ ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
JMFF017L02+ ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
JMFF002D15+ ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
JMFS061E08+ ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
____________________________________________________________
consensus ACCCGAGAACCCCGAAGACCCTCTACCACTAGAGAATTCTCTGCTACTTCTGGGCGAATT
. : . : . : . : . : . :
JMFF014J08+ CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCTCTTGGGCCTGTCGCTCCTATCAAC
JMFF050M19+ CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCTCTTGGGCCTGTCGCTCCTATCAAC
JMFF025C23+ CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCTCTTGGGCCTGTCGCTCCTATCAAC
JMFF017L02+ CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCTCTTGGGCCTGTCGCTCCTATCAAC
JMFF002D15+ CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCT-ATGGGCCTGTCGCTCCTATCAAC
JMFS061E08+ CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCTCTTGGGCCTGTCGCTCCTATCAAC
____________________________________________________________
consensus CCTCGCTATAACTGTTCCGAACGACTCATCGAAGCTCTTGGGCCTGTCGCTCCTATCAAC
. : . : . : . : . : . :
JMFF014J08+ GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
JMFF050M19+ GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
JMFF025C23+ GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
JMFF017L02+ GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
JMFF002D15+ GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
JMFS061E08+ GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
____________________________________________________________
consensus GGCGGCGGCGGCTCTCCGGCTTTCATTCTTGACGCTGGCCGGAGAATTGGGCTGTGGGTC
. : . : . : . : . : . :
JMFF014J08+ TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
JMFF050M19+ TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
JMFF025C23+ TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
JMFF017L02+ TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
JMFF002D15+ TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
JMFS061E08+ TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
____________________________________________________________
consensus TTTGGAGCTACTCTTGGTGGATTTCCTTCCCCACCAAGCGGGCATTTTTTATGAACTAAC
. : . : . : . : . : . :
JMFF050M19+ TGAGAGAAGAATGAGTGAAAAACTTATCAGT
JMFF025C23+ TGAGAGAAGAATGAGTGAAAAACTTATCAGTTTCTGAGAGAGAGAGAGGAGGAGGAGGAG
JMFF017L02+ TGAGAGAAGAATGAGTGAAAAACTTATCAGTTTCTGAGAGAGAGAGAGGAGGAGGAGGAG
JMFF002D15+ TGAGAGAAGAATGAGTGAAAAACTTATCAGTTTC
JMFS061E08+ TGAGAGAAGAATGAGTGAAAAACTTATCAGTTTCTGAGAGAGAGAGAGGAGGAGGAGGAG
____________________________________________________________
consensus TGAGAGAAGAATGAGTGAAAAACTTATCAGTTTCTGAGAGAGAGAGAGGAGGAGGAGGAG
. : . : . : . : . : . :
JMFF025C23+ AAATTTTATATTATGAACGGAAA
JMFF017L02+ AAATTTTATATTATGAACGGAAATGAGGTAAAGGGGGATGTACCAGAAGGA
JMFS061E08+ AAATTTTATATTATGAACGGAAATGAGGTAAAGGGGGATGTACCAGAAGGACCTGAAGAC
____________________________________________________________
consensus AAATTTTATATTATGAACGGAAATGAGGTAAAGGGGGATGTACCAGAAGGACCTGAAGAC