Contig 004798:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF016E04-                                           CGTATACGGGAATGAGTTTTGCTGCTA
rJMSF016D07-                                             TATACGGGAATGAGTTTTGCTGCTA
                      ____________________________________________________________
consensus                                              CGTATACGGGAATGAGTTTTGCTGCTA
 
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rJMSF016E04-          ATCTTATACAATAGTAAAAATGCAGCAGCTAGGAGTTAGGTAGCTGGAAAAAAGGAGATT
rJMSF016D07-          ATCTTATACAATAGTAAAAATGCAGCAGCTAGGAGTTAGGTAGCTGGAAAAAAGGAGATT
                      ____________________________________________________________
consensus             ATCTTATACAATAGTAAAAATGCAGCAGCTAGGAGTTAGGTAGCTGGAAAAAAGGAGATT
 
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rJMSF016E04-          TCATAACTAATAAAGTATGAGACGAAGTCCCTCCCTCCCTCCCTTGGCTTCTAGCAAGCA
rJMSF016D07-          TCATAACTAATAAAGTATGAGACGAAGTCCCTCCCTCCCTCCCTTGGCTTCTAGCAAGCA
                      ____________________________________________________________
consensus             TCATAACTAATAAAGTATGAGACGAAGTCCCTCCCTCCCTCCCTTGGCTTCTAGCAAGCA
 
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rJMSF016E04-          AATGCAGAAGCCATTGGTCGTTGTTGATGGGTGATTGTGGGTGGCATATCAACTCCATCA
rJMSF016D07-          AATGCAGAAGCCATTGGTCGTTGTTGATGGGTGATTGTGGGTGGCATATCAACTCCATCA
                      ____________________________________________________________
consensus             AATGCAGAAGCCATTGGTCGTTGTTGATGGGTGATTGTGGGTGGCATATCAACTCCATCA
 
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rJMSF016E04-          TCTTCTTCCTCGTTGTCTTCCACCTCCCACAGAAAACTAGCGTATGCAGCTTCAACATGA
rJMSF016D07-          TCTTCTTCCTCGTTGTCTTCCACCTCCCACAGAAAACTAGCGTATGCAGCTTCAACATGA
                      ____________________________________________________________
consensus             TCTTCTTCCTCGTTGTCTTCCACCTCCCACAGAAAACTAGCGTATGCAGCTTCAACATGA
 
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rJMSF016E04-          CTGTCTCCTGCAGCGGCCTGAACCGCCCGTTCAAAATAGCTGGTGGCGTTTTCTGCATCG
rJMSF016D07-          CTGTCTCCTGCAGCGGCCTGAACCGCCCGTTCAAAATAGCTGGTGGCGTTTTCTGCATCG
                      ____________________________________________________________
consensus             CTGTCTCCTGCAGCGGCCTGAACCGCCCGTTCAAAATAGCTGGTGGCGTTTTCTGCATCG
 
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rJMSF016E04-          CCATGGACCTCCCAGATAAGCTTTGCGTACTGTGATAGAACTTCCCCGTCAGCCGGGTCC
rJMSF016D07-          CCATGGACCTCCCAGATAAGCTTTGCGTACTGTGATAGAACTTCCCCGTCAGCCGGGTCC
                      ____________________________________________________________
consensus             CCATGGACCTCCCAGATAAGCTTTGCGTACTGTGATAGAACTTCCCCGTCAGCCGGGTCC
 
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rJMSF016E04-          GCTAGAATCGCCCTCGAGTAATATTCCTCTGCTTTTTTAGCATCCTTCTTTGTCTGGTAT
rJMSF016D07-          GCTAGAATCGCCCTCGAGTAATATTCCTCTGCTTTTTTAGCATCCTTCTTTGTCTGGTAT
                      ____________________________________________________________
consensus             GCTAGAATCGCCCTCGAGTAATATTCCTCTGCTTTTTTAGCATCCTTCTTTGTCTGGTAT
 
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rJMSF016E04-          AAGAACTGAGCGTAATTCCTTAATAGCAGAGGATTGCCTGGATTCTCCTCCACCATTTTC
rJMSF016D07-          AAGAACTGAGCGTAATTCCTTAATAGCAGAGGATTGCCTGGATTCTCCTCCACCATTTTC
                      ____________________________________________________________
consensus             AAGAACTGAGCGTAATTCCTTAATAGCAGAGGATTGCCTGGATTCTCCTCCACCATTTTC
 
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rJMSF016E04-          TTATAATGCTCTTCTGTACTAATCCCAAAGCTGTCACCGCCGTCAAACCCACCCCTTCCG
rJMSF016D07-          TTATAATGCTCTTCTGTACTAATCCCAAAGCTGTCACCGCCGTCAAACCCACCCCTTCCG
                      ____________________________________________________________
consensus             TTATAATGCTCTTCTGTACTAATCCCAAAGCTGTCACCGCCGTCAAACCCACCCCTTCCG
 
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rJMSF016E04-          CCGTCGCTTCCTCCGGTAGGATACCCGCCGCCGCTACCAAATCCAACGCCGGCGACTTCC
rJMSF016D07-          CCGTCGCTTCCTCCGGTAGGATACCCGCCGCCGCTACCAAATCCAACGCCGGCGACTTCC
JMFS053H07+                                                            CGGCGACTTCC
                      ____________________________________________________________
consensus             CCGTCGCTTCCTCCGGTAGGATACCCGCCGCCGCTACCAAATCCAACGCCGGCGACTTCC
 
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rJMSF016E04-          AAGGCTGGGAATTTGCTGAGACACCATCTCAGTTCCTCACTCATGCCGGGGTTAGCGCTA
rJMSF016D07-          AAAGCTGGGAATTTGCTGAGACACCATCTCAGTTCCTCACTCATGCCGGGGTTAGCGCTA
JMFS053H07+           AAAGCTGGGAATTTGCTGAGACACCATCTCAGTTCCTCACTCATGCCGGGGTTAGCGCTA
                      ____________________________________________________________
consensus             AAAGCTGGGAATTTGCTGAGACACCATCTCAGTTCCTCACTCATGCCGGGGTTAGCGCTA
 
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rJMSF016E04-          CCAAACGCCTCCCATTCCTCATCACTCTCCTCGTCTTCCCCGTGACTCCTCGGACCCGTC
rJMSF016D07-          CCAAACGCCTCCCATTCCTCATCACTCTCCTCGTCTTCCCCGTGACTCCTCGGANCCGTC
JMSF016D07+                                            TCTTCCCCGTGACTCNTCGGACCCGTC
JMFS053H07+           CCAAACGCCTCCCATTCCTCATCACTCTCCTCGTCTTCCCCGTGACTCCTCGGACCCGTC
                      ____________________________________________________________
consensus             CCAAACGCCTCCCATTCCTCATCACTCTCCTCGTCTTCCCCGTGACTCCTCGGACCCGTC
 
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rJMSF016E04-          GCCG                                                        
rJMSF016D07-          GCCGAGAAAGACGGAATGGCTTCCA                                   
JMSF016D07+           GCCGAGAAAGACGGAATGGCTTCCAAGAACGACGCGCGTGGCTTGCGCGCAAATTTTCGC
JMFS053H07+           GCCGAGAAAGACGGAATGGCTTCCAAGAACGACGCGCGTGGCTTGCGCGCAAATTTTCGC
                      ____________________________________________________________
consensus             GCCGAGAAAGACGGAATGGCTTCCAAGAACGACGCGCGTGGCTTGCGCGCAAATTTTCGC
 
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JMSF016D07+           AGCGGAACTGCTAGGCTGAATTCATCCGCGTTGTTGCACAAAGCATCGGCCGTTAAACCT
JMFS053H07+           AGCGGAACTGCTAGGCTGAATTCATCCGCGTTGTTGCACAAAGCATCGGCCGTTAAACCT
                      ____________________________________________________________
consensus             AGCGGAACTGCTAGGCTGAATTCATCCGCGTTGTTGCACAAAGCATCGGCCGTTAAACCT
 
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JMSF016D07+           TCCAGATTCCCCTCCGACTGAGCTCTCCGAAACCCGTTACCGGAAAACGGCAGGCTAACT
JMFS053H07+           TCCAGATTCCCCTCCGACTGAGCTCTCCGAAACCCGTTACCGGAAAACGGCAGGCTAACT
                      ____________________________________________________________
consensus             TCCAGATTCCCCTCCGACTGAGCTCTCCGAAACCCGTTACCGGAAAACGGCAGGCTAACT
 
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JMSF016D07+           GTGGGAGAAGAATTGAAAGAAAGTTTGGTGAACCCGACATGGGCATGGTTTACAGAGATC
JMSF016E04+                         GAAAGAAAGTTTGGTGAACCCGACATGGGCATGGTTTACAGAGATC
JMFS053H07+           GTGGGAGAAGAATTGAAAGAAAGTTTGGTGAACCCGACATGGGCATGGTTTACAGAGATC
                      ____________________________________________________________
consensus             GTGGGAGAAGAATTGAAAGAAAGTTTGGTGAACCCGACATGGGCATGGTTTACAGAGATC
 
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JMSF016D07+           GATTTCTTGTGATGATGAGCAGACGATGGTGTCTGGTTTGGGGTTATGCTTTCTGGTAAT
JMSF016E04+           GATTTCTTGTGATGATGAGCAGACGATGGTGTCTGGTTTGGGGTTATGCTTTCTGGTAAT
JMFS053H07+           GATTTCTTGTGATGATGAGCAGACGATGGTGTCTGGTTTGGGGTTATGCTTTCTGGTAAT
                      ____________________________________________________________
consensus             GATTTCTTGTGATGATGAGCAGACGATGGTGTCTGGTTTGGGGTTATGCTTTCTGGTAAT
 
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JMSF016D07+           TGGTGGTGGTGGTGGTGGTGAAGTTGGCCGCCGCCGCTATCTCCATGGGAAGAGAGCAGG
JMSF016E04+           TGGTGGTGGTGGTGGTGGTGAAGTTGGCCGCCGCCGCTATCTCCATGGGAAGAGAGCAGG
JMFS053H07+           TGGTGGTGGTGGTGGTGGTGAAGTTGGCCGCCGCCGCTATCTCCATGGGAAGAGAGCAGG
                      ____________________________________________________________
consensus             TGGTGGTGGTGGTGGTGGTGAAGTTGGCCGCCGCCGCTATCTCCATGGGAAGAGAGCAGG
 
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JMSF016D07+           GATCCAAGAATCGGCGTAGAAGAGCTCCTTAACATCATGTTTCAATTCCGAGGAAATGGG
JMSF016E04+           GATCCAAGAATCGGCGTAGAAGAGCTCCTTAACATCATGTTTCAATTCCGAGGAAATGGG
JMFS053H07+           GATCCAAGAATCGGCGTAGAAGAGCTGCTTAACATCATGTTTCAATTCCGAGGAAATGGG
                      ____________________________________________________________
consensus             GATCCAAGAATCGGCGTAGAAGAGCTCCTTAACATCATGTTTCAATTCCGAGGAAATGGG
 
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JMSF016D07+           GAAGCT                                                      
JMSF016E04+           GAAGCT                                                      
JMFS053H07+           GAAGCTAGTGAATCAAATAAAGGGTAGAGATACACCCATCTTATAGGATGTTTCAATCGT
                      ____________________________________________________________
consensus             GAAGCTAGTGAATCAAATAAAGGGTAGAGATACACCCATCTTATAGGATGTTTCAATCGT