Contig 004795:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002B19Sequence578004795 (4)emb|CDP07060.1|5e-92unnamed protein product [Coffea canephora]714006158 (3)ref|XP_006340221.1|2e-94PREDICTED: cell division cycle protein 48 homolog [Solanum tuberosum]
JMFS028D06Sequence625004795 (4)emb|CDP07060.1|1e-107unnamed protein product [Coffea canephora]
JMFS047F01Sequence621004795 (4)emb|CDP07060.1|1e-107unnamed protein product [Coffea canephora]
JMFS104B12Sequence620004795 (4)emb|CDP07060.1|1e-108unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS028D06+                                                    ATTTCAGTGTCTGGAGCAA
JMFS104B12+                                              CAGAAGATTTCAGTGTCTGGAGCAA
JMFS047F01+                                                    ATTTCAGTGTCTGGAGCAA
                      ____________________________________________________________
consensus                                                CAGAAGATTTCAGTGTCTGGAGCAA
 
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JMFS028D06+           CAACACAATATTCCCCTGGATCTGTCTCAATGACCTTGAATTCCACACTTCTCATACCCC
JMFF002B19+                                                   TTCCACACTTCTCATACCCC
JMFS104B12+           CAACACAATATTCCCCTGGATCTGTCTCAATGACCTTGAATTCCACACTTCTCATACCCC
JMFS047F01+           CAACACAATATTCCCCTGGATCTGTCTCAATGACCTTGAATTCCACACTTCTCATACCCC
                      ____________________________________________________________
consensus             CAACACAATATTCCCCTGGATCTGTCTCAATGACCTTGAATTCCACACTTCTCATACCCC
 
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JMFS028D06+           CTCGAATAAGGAAGTGGTCTCCTTTCCTCAAAGGACGATATGCCTCCAAAAAGTAAGGTT
JMFF002B19+           CTCGAATAAGGAAGTGGTCTCCTTTCCTCAAAGGACGATATGCCTCCAAAAAGTAAGGTT
JMFS104B12+           CTCGAATAAGGAAGTGGTCTCCTTTCCTCAAAGGACGATATGCCTCCAAAAAGTAAGGTT
JMFS047F01+           CTCGAATAAGGAAGTGGTCTCCTTTCCTCAAAGGACGATATGCCTCCAAAAAGTAAGGTT
                      ____________________________________________________________
consensus             CTCGAATAAGGAAGTGGTCTCCTTTCCTCAAAGGACGATATGCCTCCAAAAAGTAAGGTT
 
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JMFS028D06+           TCAAGTATGATTCAAAGAGATCACCAGTGACCCCTTCAATTGTATCATCTATAGGAAGTA
JMFF002B19+           TCAAGTATGATTCAAAGAGATCACCAGTGACCCCTTCAATTGTATCATCTATAGGAAGTA
JMFS104B12+           TCAAGTATGATTCAAAGAGATCACCAGTGACCCCTTCAATTGTATCATCTATAGGAAGTA
JMFS047F01+           TCAAGTATGATTCAAAGAGATCACCAGTGACCCCTTCAATTGTATCATCTATAGGAAGTA
                      ____________________________________________________________
consensus             TCAAGTATGATTCAAAGAGATCACCAGTGACCCCTTCAATTGTATCATCTATAGGAAGTA
 
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JMFS028D06+           TGTGCACACGTTTCCCATACTTAACATCTGGACATTGATGTACAGATACAACATCAGCAA
JMFF002B19+           TGTGCACACGTTTCCCATACTTAACATCTGGACATTGATGTACAGATACAACATCAGCAA
JMFS104B12+           TGTGCACACGTTTCCCATACTTAACATCTGGACATTGATGTACAGATACAACATCAGCAA
JMFS047F01+           TGTGCACACGTTTCCCATACTTAACATCTGGACATTGATGTACAGATACAACATCAGCAA
                      ____________________________________________________________
consensus             TGTGCACACGTTTCCCATACTTAACATCTGGACATTGATGTACAGATACAACATCAGCAA
 
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JMFS028D06+           GTCGGACCCTCAAATTTGACCGGACAACTTTATTCATCCTAATCTTTGCCTCTTCACATG
JMFF002B19+           GTCGGACCCTCAAATTTGACCGGACAACTTTATTCATCCTAATCTTTGCCTCTTCACATG
JMFS104B12+           GTCGGACCCTCAAATTTGACCGGACAACTTTATTCATCCTAATCTTTGCCTCTTCACATG
JMFS047F01+           GTCGGACCCTCAAATTTGACCGGACAACTTTATTCATCCTAATCTTTGCCTCTTCACATG
                      ____________________________________________________________
consensus             GTCGGACCCTCAAATTTGACCGGACAACTTTATTCATCCTAATCTTTGCCTCTTCACATG
 
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JMFS028D06+           TCTCATCAGCAAGAGCAATAACCACTGTATCTTTCCTTTTTTTGCCCTTAATCAGAATCG
JMFF002B19+           TCTCATCAGCAAGAGCAATAACCACTGTATCTTTCCTTTTTTTGCCCTTAATCAGAATCG
JMFS104B12+           TCTCATCAGCAAGAGCAATAACCACTGTATCTTTCCTTTTTTTGCCCTTAATCAGAATCG
JMFS047F01+           TCTCATCAGCAAGAGCAATAACCACTGTATCTTTCCTTTTTTTGCCCTTAATCAGAATCG
                      ____________________________________________________________
consensus             TCTCATCAGCAAGAGCAATAACCACTGTATCTTTCCTTTTTTTGCCCTTAATCAGAATCG
 
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JMFS028D06+           TGTCTCCACGGAAGAGCTGGAGCTTCTCCATGGTAGCAGGGTGGAGAGCAACGACGGAGT
JMFF002B19+           TGTCTCCACGGAAGAGCTGGAGCTTCTCCATGGTAGCAGGGTGGAGAGCAACGACGGAGT
JMFS104B12+           TGTCTCCACGGAAGAGCTGGAGCTTCTCCATGGTAGCAGGGTGGAGAGCAACGACGGAGT
JMFS047F01+           TGTCTCCACGGAAGAGCTGGAGCTTCTCCATGGTAGCAGGGTGGAGAGCAACGACGGAGT
                      ____________________________________________________________
consensus             TGTCTCCACGGAAGAGCTGGAGCTTCTCCATGGTAGCAGGGTGGAGAGCAACGACGGAGT
 
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JMFS028D06+           TATCATCATTGATCGCCTCATCCACGACAAGCCGATTCGGCGCCTTCTTCCGCTCCAGAA
JMFF002B19+           TATCATCATTGATCGCCTCATCCACGACAAGCCGATTCGGCGCCTTCTTCCGCTCCAGAA
JMFS104B12+           TATCATCATTGATCGCCTCATCCACGACAAGCCGATTCGGCGCCTTCTTCCGCTCCAGAA
JMFS047F01+           TATCATCATTGATCGCCTCATCCACGACAAGCCGATTCGGCGCCTTCTTCCGCTCCAGAA
                      ____________________________________________________________
consensus             TATCATCATTGATCGCCTCATCCACGACAAGCCGATTCGGCGCCTTCTTCCGCTCCAGAA
 
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JMFS028D06+           TCGCCGTAGAGAAGTCCTTCTTAGTACTTTTCGAGTCAGATGACTCGGCTTGGTGACTCA
JMFF002B19+           TCGCCGTAGAGAAGTCCTTCTTAGTACTTTTCGAGTCAGATGACTCGGCTTGGTGACTCA
JMFS104B12+           TCGCCGTAGAGAAGTCCTTCTTAGTACTTTTCGAGTCAGATGACTCGGCTTGGTGACTCA
JMFS047F01+           TCGCCGTAGAGAAGTCCTTCTTAGTACTTTTCGAGTCAGATGACTCGGCTTGGTGACTCA
                      ____________________________________________________________
consensus             TCGCCGTAGAGAAGTCCTTCTTAGTACTTTTCGAGTCAGATGACTCGGCTTGGTGACTCA
 
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JMFS028D06+           TCTTCGATCT                                                  
JMFF002B19+           TCTTCGATCT                                                  
JMFS104B12+           TCTTCGATCTGAAATTGGATAGCCGAGGACGAGGGAGAGATATTTTGCCGGAGAA     
JMFS047F01+           TCTTCGATCTGAAATTGGATAGCCGAGGACGAGGGAGAGATATTTTGCCGGAGAAGGAAA
                      ____________________________________________________________
consensus             TCTTCGATCTGAAATTGGATAGCCGAGGACGAGGGAGAGATATTTTGCCGGAGAAGGAAA