Contig 004790:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003A20Sequence479004790 (4)ref|XP_010926250.1|8e-14PREDICTED: formin-like protein 20 isoform X2 [Elaeis guineensis]
JMFS040A06Sequence633004790 (4)ref|XP_010652843.1|2e-12PREDICTED: apoptotic chromatin condensation inducer in the nucleus isoform X2 [
JMFS072G01Sequence627004790 (4)ref|XP_010652843.1|2e-12PREDICTED: apoptotic chromatin condensation inducer in the nucleus isoform X2 [
JMFS122E12Sequence574004790 (4)ref|XP_010652843.1|2e-12PREDICTED: apoptotic chromatin condensation inducer in the nucleus isoform X2 [

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS072G01+ CCTTCAACAACTTTACCATCATCAGATGGCGTTCTGTTGTCAC
JMFS040A06+ CTTTACCATCATCAGATGGCGTTCTGTTGTCAC
                      ____________________________________________________________
consensus CCTTCAACAACTTTACCATCATCAGATGGCGTTCTGTTGTCAC
 
. : . : . : . : . : . :
JMFS122E12+ ACTTTATGCACTTCACTTTCCACTTTATCACCTATTGAATCACAAGCAGCAG
JMFS072G01+ CAAGATCAACTTTATGCACTTCACTTTCCACTTTATCACCTATTGAATCACAAGCAGCAG
JMFS040A06+ CAAGATCAACTTTATGCACTTCACTTTCCACTTTATCACCTATTGAATCACAAGCAGCAG
                      ____________________________________________________________
consensus CAAGATCAACTTTATGCACTTCACTTTCCACTTTATCACCTATTGAATCACAAGCAGCAG
 
. : . : . : . : . : . :
JMFS122E12+ GAGCATCCTTCTCCTTGTTAGCATCAAATAACTCAGTCTTTTCTTTTTCAGATTCAACTT
JMFS072G01+ GAGCATCCTTCTCCTTGTTAGCATCAAATAACTCAGTCTTTTCTTTTTCAGATTCAACTT
JMFF003A20+ TCAGATTCAACTT
JMFS040A06+ GAGCATCCTTCTCCTTGTTAGCATCAAATAACTCAGTCTTTTCTTTTTCAGATTCAACTT
                      ____________________________________________________________
consensus GAGCATCCTTCTCCTTGTTAGCATCAAATAACTCAGTCTTTTCTTTTTCAGATTCAACTT
 
. : . : . : . : . : . :
JMFS122E12+ TAGACTCGGGGGCAGAGTCAAAACCATCGCCAGTGTTTCCCTGTTCACTTTCCTGCTCAC
JMFS072G01+ TAGACTCGGGGGCAGAGTCAAAACCATCGCCAGTGTTTCCCTGTTCACTTTCCTGCTCAC
JMFF003A20+ TAGACTCGGGGGCAGAGTCAAAACCATCGCCAGTGTTTCCCTGTTCACTTTCCTGCTCAC
JMFS040A06+ TAGACTCGGGGGCAGAGTCAAAACCATCGCCAGTGTTTCCCTGTTCACTTTCCTGCTCAC
                      ____________________________________________________________
consensus TAGACTCGGGGGCAGAGTCAAAACCATCGCCAGTGTTTCCCTGTTCACTTTCCTGCTCAC
 
. : . : . : . : . : . :
JMFS122E12+ TGCGAAGTGCTTCATCCAACCGCTTCACCAAATCTTCCTTCAGCCCTTTTGTTGTTAACT
JMFS072G01+ TGCGAAGTGCTTCATCCAACCGCTTCACCAAATCTTCCTTCAGCCCTTTTGTTGTTAACT
JMFF003A20+ TGCGAAGTGCTTCATCCAACCGCTTCACCAAATCTTCCTTCAGCCCTTTTGTTGTTAACT
JMFS040A06+ TGCGAAGTGCTTCATCCAACCGCTTCACCAAATCTTCCTTCAGCCCTTTTGTTGTTAACT
                      ____________________________________________________________
consensus TGCGAAGTGCTTCATCCAACCGCTTCACCAAATCTTCCTTCAGCCCTTTTGTTGTTAACT
 
. : . : . : . : . : . :
JMFS122E12+ TGCGTCTCTTAAGCTCTTCCTTTAGCTCTGTGACTTTCCACTGATCAATCGGTCGACTGT
JMFS072G01+ TGCGTCTCTTAAGCTCTTCCTTTAGCTCTGTGACTTTCCACTGATCAATCGGTCGACTGT
JMFF003A20+ TGCGTCTCTTAAGCTCTTCCTTTAGCTCTGTGACTTTCCACTGATCAATCGGTCGACTGT
JMFS040A06+ TGCGTCTCTTAAGCTCTTCCTTTAGCTCTGTGACTTTCCACTGATCAATCGGTCGACTGT
                      ____________________________________________________________
consensus TGCGTCTCTTAAGCTCTTCCTTTAGCTCTGTGACTTTCCACTGATCAATCGGTCGACTGT
 
. : . : . : . : . : . :
JMFS122E12+ CCAGAATAGGATATGGGGATGACATTTGTTTGTCCAAAATCCACACTTAAAATTGACTGG
JMFS072G01+ CCAGAATAGGATATGGGGATGACATTTGTTTGTCCAAAATCCACACTTAAAATTGACTGG
JMFF003A20+ CCAGAATAGGATATGGGGATGACATTTGTTTGTCCAAAATCCACACTTAAAATTGACTGG
JMFS040A06+ CCAGAATAGGATATGGGGATGACATTTGTTTGTCCAAAATCCACACTTAAAATTGACTGG
                      ____________________________________________________________
consensus CCAGAATAGGATATGGGGATGACATTTGTTTGTCCAAAATCCACACTTAAAATTGACTGG
 
. : . : . : . : . : . :
JMFS122E12+ TAAGGATTTGGTTCAATGCTGGAATAGCTGTGATCACAGATGTCAGTTTCCACAGTTACA
JMFS072G01+ TAAGGATTTGGTTCAATGCTGGAATAGCTGTGATCACAGATGTCAGTTTCCACAGTTACA
JMFF003A20+ TAAGGATTTGGTTCAATGCTGGAATAGCTGTGATCACAGATGTCAGTTTCCACAGTTACA
JMFS040A06+ TAAGGATTTGGTTCAATGCTGGAATAGCTGTGATCACAGATGTCAGTTTCCACAGTTACA
                      ____________________________________________________________
consensus TAAGGATTTGGTTCAATGCTGGAATAGCTGTGATCACAGATGTCAGTTTCCACAGTTACA
 
. : . : . : . : . : . :
JMFS122E12+ AGAAACGTGTGGAGACAGCAAGCCCTAGCTTCACCATAACACAAACACAACTATCAGCAG
JMFS072G01+ AGAAACGTGTGGAGACAGCAAGCCCTAGCTTCACCATAACACAAACACAACTATCAGCAG
JMFF003A20+ AGAAACGTGTGGAGACAGCAAGCCCTAGCTTCACCATAACACAAACACAACTATCAGCAG
JMFS040A06+ AGAAACGTGTGGAGACAGCAAGCCCTAGCTTCACCATAACACAAACACAACTATCAGCAG
                      ____________________________________________________________
consensus AGAAACGTGTGGAGACAGCAAGCCCTAGCTTCACCATAACACAAACACAACTATCAGCAG
 
. : . : . : . : . : . :
JMFS122E12+ AATTTAACAAAAATCAAACAAATGAAAACAAGATTCAAAAGAAAAATCTGGAAAATGTAA
JMFS072G01+ AATTTAACAAAAATCAAACAAATGAAAACAAGATTCAAAAGAAAAATCTGGAAAATGTAA
JMFF003A20+ AATTTAACAAAAATCAAACAAATGAAAACAAGATTCAAAAGAAAAATCTGGAAAATGTAA
JMFS040A06+ AATTTAACAAAAATCAAACAAATGAAAACAAGATTCAAAAGAAAAATCTGGAAAATGTAA
                      ____________________________________________________________
consensus AATTTAACAAAAATCAAACAAATGAAAACAAGATTCAAAAGAAAAATCTGGAAAATGTAA
 
. : . : . : . : . : . :
JMFS122E12+ AGTGAGAGCAAAAAATAGCGGTCCGATTAGGGTTTTGGGTAG
JMFS072G01+ AGTGAGAGCAAAAAATAGCGGTCCGATTAGGGTTTTGGGTAG
JMFF003A20+ AGTGAGAGCAAAAAATAGCGGTCCGATTAGGGTTTTGGGTAG
JMFS040A06+ AGTGAGAGCAAAAAATAGCGGTCCGATTAGGGTTTTGGGTAGTGCTTCTGCCTGCAGCCC
                      ____________________________________________________________
consensus AGTGAGAGCAAAAAATAGCGGTCCGATTAGGGTTTTGGGTAGTGCTTCTGCCTGCAGCCC