Contig 004785:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN039B09+                                                           TTGCTGCAAATT
JMFN039O22+                                                                GCAAATT
                      ____________________________________________________________
consensus                                                             TTGCTGCAAATT
 
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JMFN039B09+           GTTGCTGACGAAGCTGCATTTGAATTAACTGGCTATTTCTGGCATTCATTGCACTAATAG
JMFN039O22+           GTTGCTGACGAAGCTGCATTTGAATTAACTGGCTATTTCTGGCATTCATTGCACTAATAG
                      ____________________________________________________________
consensus             GTTGCTGACGAAGCTGCATTTGAATTAACTGGCTATTTCTGGCATTCATTGCACTAATAG
 
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JMFN039B09+           CATTACTTGTATTGTCTATTGGAAATTCACTAGGATTTTCAAGCTTTACTTCAACCAGTG
JMFN039O22+           CATTACTTGTATTGTCTATTGGAAATTCACTAGGATTTTCAAGCTTTACTTCAACCAGTG
                      ____________________________________________________________
consensus             CATTACTTGTATTGTCTATTGGAAATTCACTAGGATTTTCAAGCTTTACTTCAACCAGTG
 
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JMFN039B09+           GCCTGTCCTTCTCAATATTCACGTTCACATTCATGTTTGCACCCATACCACCAGGGCGAG
JMFN039O22+           GCCTGTCCTTCTCAATATTCACGTTCACATTCATGTTTGCACCCATACCACCAGGGCGAG
                      ____________________________________________________________
consensus             GCCTGTCCTTCTCAATATTCACGTTCACATTCATGTTTGCACCCATACCACCAGGGCGAG
 
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JMFN039B09+           GGGTTGATTGTTGCTGGCGTCTACGCATTCTTTCCCATTGCTGCTGCTGCTGTTGCTGTA
JMFN039O22+           GGGTTGATTGTTGCTGGCGTCTACGCATTCTTTCCCATTGCTGCTGCTGCTGTTGCTGTA
JMFS035E09+                                          TTCCCATTGCTGCTGCTGCTGTTGCTGTA
                      ____________________________________________________________
consensus             GGGTTGATTGTTGCTGGCGTCTACGCATTCTTTCCCATTGCTGCTGCTGCTGTTGCTGTA
 
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JMFN039B09+           TTGACACATTTTGAGGATTAATCATCTGCGGCATCTGAGGATGCATTTGCCTTAGGATCT
JMFN039O22+           TTGACACATTTTGAGGATTAATCATCTGCGGCATCTGAGGATGCATTTGCCTTAGGATCT
JMFS035E09+           TTGACACATTTTGAGGATTAATCATCTGCGGCATCTGAGGATGCATTTGCCTTAGGATCT
                      ____________________________________________________________
consensus             TTGACACATTTTGAGGATTAATCATCTGCGGCATCTGAGGATGCATTTGCCTTAGGATCT
 
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JMFN039B09+           GCTGGGGCTGCCGAATCGGAGCTTGGTGCTGAGGTTGCTGCAACTGTGGCTGAAATCCTT
JMFN039O22+           GCTGGGGCTGCCGAATCGGAGCTTGGTGCTGAGGTTGCTGCAACTGTGGCTGAAATCCTT
JMFS035E09+           ATTGGGGCTGCCGAATCGGAGCTTGGTGCTGAGGTTGCTGCAACTGTGGCTGAAATCCTT
                      ____________________________________________________________
consensus             GCTGGGGCTGCCGAATCGGAGCTTGGTGCTGAGGTTGCTGCAACTGTGGCTGAAATCCTT
 
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JMFN039B09+           GTTGTTGCTGAGGAGTTTGATGGGTAATATTCCTACTGTTATCCTTCACAAGCTCAGCCA
JMFN039O22+           GTTGTTGCTGAGGAGTTTGATGGGTAATATTCCTACTGTTATCCTTCACAAGCTCAGCCA
JMFS035E09+           GTTGTTGCTGAGGAGTTTGATGGGTAATATTCCTACTGTTATCCTTCACAAGCTCAGCCA
                      ____________________________________________________________
consensus             GTTGTTGCTGAGGAGTTTGATGGGTAATATTCCTACTGTTATCCTTCACAAGCTCAGCCA
 
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JMFN039B09+           AGGCTCCTAGATTACTATGTCCAGCTGTTTGAAGGAACATCTTCAGTAGCTCAATGGCCG
JMFN039O22+           AGGCTCCTAGATTACTATGTCCAGCTGTTTGAAGGAACATCTTCAGTAGCTCAATGGCCG
JMFS035E09+           AGGCTCCTAGATTACTATGTCCAGCTGTTTGAAGGAACATCTTCAGTAGCTCAATGGCCG
                      ____________________________________________________________
consensus             AGGCTCCTAGATTACTATGTCCAGCTGTTTGAAGGAACATCTTCAGTAGCTCAATGGCCG
 
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JMFN039B09+           AACACTGTTTTCTATAACTATCAGAAAGGAGTTTTAAGATACGCCCCAATTTACAAATAT
JMFN039O22+           AACACTGTTTTCTATAACTATCAGAAAGGAGTTTTAAGATACGCCCCAATTTACAAATAT
JMFS035E09+           AACACTGTTTTCTATAACTATCAGAAAGGAGTTTTAAGATACGCCCCAATTTACAAATAT
                      ____________________________________________________________
consensus             AACACTGTTTTCTATAACTATCAGAAAGGAGTTTTAAGATACGCCCCAATTTACAAATAT
 
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JMFN039B09+           GGCAACTCAGCAATTGAGCCAGAACTTCTAACGGAACTTCTGAAGAAGCTTCAAATCCAA
JMFN039O22+           GGCAACTCAGCAATTGAGCCAGAACTTCTAACGGAACTTCTGAAGAAGCTTCAAATCCAA
JMFS035E09+           GGCAACTCAGCAATTGAGCCAGAACTTCTAACGGAACTTCTGAAGAAGCTTCAAATCCAA
                      ____________________________________________________________
consensus             GGCAACTCAGCAATTGAGCCAGAACTTCTAACGGAACTTCTGAAGAAGCTTCAAATCCAA
 
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JMFN039B09+           TATTTGTTAGTAACTGAGCTACCACTTT                                
JMFN039O22+           TATTTGTTAGTAACTGAGCTACCACTTT                                
JMFS035E09+           TATTTGTTAGTAACTGAGCTACCACTTTTTCTGACAATTTTGATGCTTGCTCTGCACCAA
                      ____________________________________________________________
consensus             TATTTGTTAGTAACTGAGCTACCACTTTTTCTGACAATTTTGATGCTTGCTCTGCACCAA
 
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JMFS035E09+           GAACTTTCCTGCTCCCCTCAAACCCATTCTTTCCACGGCTTTGATTTCCTCCTTGTTCCA
                      ____________________________________________________________
consensus             GAACTTTCCTGCTCCCCTCAAACCCATTCTTTCCACGGCTTTGATTTCCTCCTTGTTCCA
 
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JMFS035E09+           TGCTAAGGTACTCAGGTCTGATGCCAAGCCTCTCAATCATAATAGGATACTTTACCTCAG
                      ____________________________________________________________
consensus             TGCTAAGGTACTCAGGTCTGATGCCAAGCCTCTCAATCATAATAGGATACTTTACCTCAG
 
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JMFS035E09+           ATAGCGACAAAGAGTCCTATTATGATTGAGAGGCNTAAGGTACTCAGGTCTGATGCCAAG
                      ____________________________________________________________
consensus             ATAGCGACAAAGAGTCCTATTATGATTGAGAGGCNTAAGGTACTCAGGTCTGATGCCAAG