Contig 004782:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS099E01+                                                         AAGCCCCATGTCGA
JMFS091B09+                             TCACGTATAGGCTTAATCAGATAATCACAAGCCCCATGTCGA
                      ____________________________________________________________
consensus                               TCACGTATAGGCTTAATCAGATAATCACAAGCCCCATGTCGA
 
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JMFS099E01+           ATTCCCTTCATGACAAGGTTAGTTCTTCCATCTGCTGACATCATTATAACAGGAAGGTCC
JMFS091B09+           ATTCCCTTCATGACAAGGTTAGTTCTTCCATCTGCTGACATCATTATAACAGGAAGGTCC
                      ____________________________________________________________
consensus             ATTCCCTTCATGACAAGGTTAGTTCTTCCATCTGCTGACATCATTATAACAGGAAGGTCC
 
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JMFS099E01+           ATTTCCAGCCCAACATGCTCAAGAAGTTTGAATCCATCCATATCAGGCATATGGACATCA
JMFS091B09+           ATTTCCAGCCCAACATGCTCAAGAAGTTTGAATCCATCCATATCAGGCATATGGACATCA
JMFS033E07+                                      TTGAATCCATCCATATCAGGCATATGGACATCA
                      ____________________________________________________________
consensus             ATTTCCAGCCCAACATGCTCAAGAAGTTTGAATCCATCCATATCAGGCATATGGACATCA
 
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JMFS099E01+           CTTATCACAATGTCATAACAGCCTCTCCTTTCCCGTAATAAGTTTAATGCTGCAGTTGCT
JMFS091B09+           CTTATCACAATGTCATAACAGCCTCTCCTTTCCCGTAATAAGTTTAATGCTGCAGTTGCT
JMFS033E07+           CTTATCACAATGTCATAACAGCCTCTCCTTTCCCGTAATAAGTTTAATGCTGCAGTTGCT
                      ____________________________________________________________
consensus             CTTATCACAATGTCATAACAGCCTCTCCTTTCCCGTAATAAGTTTAATGCTGCAGTTGCT
 
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JMFS099E01+           TGGGAACAAATGGTCACATTGTACTTGCACTTGCGAAGCATTTGCTCTAGAATTCTGAGG
JMFS091B09+           TGGGAACAAATGGTCACATTGTAATTGCACTTGCGAAGCATTTGCTCTAGAATTCTGAGG
JMFS033E07+           TGGGAACAAATGGTCACATTGTACTTGCACTTGCGAAGCATTTGCTCTAGAATTCTGAGG
                      ____________________________________________________________
consensus             TGGGAACAAATGGTCACATTGTACTTGCACTTGCGAAGCATTTGCTCTAGAATTCTGAGG
 
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JMFS099E01+           CAAAGAAGGTCGTCGTCAACTACTAGCACCCTGAGCCCAACCGGGAACTGCTCCGGCACT
JMFS091B09+           CAAAGAAGGTCGTCGTCAACTACTAGCACCCTGAGCCCAACCGGGAACTGCTCCGGCACT
JMFS033E07+           CAAAGAAGGTCGTCGTCAACTACTAGCACCCTGAGCCCAACCGGGAACTGCTCCGGCACT
                      ____________________________________________________________
consensus             CAAAGAAGGTCGTCGTCAACTACTAGCACCCTGAGCCCAACCGGGAACTGCTCCGGCACT
 
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JMFS099E01+           ACCGCAGCAGCCATCACAAATCACAACCCTACCCCGCGAGAAATCAAACCACACAATTAC
JMFS091B09+           ACCGCAGCAGCCATCACAAATCACAACCCTACCCCGCGAGAAATCAAACCACACAATTAC
JMFS033E07+           ACCGCAGCAGCCATCACAAATCACAACCCTACCCCGCGAGAAATCAAACCACACAATTAC
                      ____________________________________________________________
consensus             ACCGCAGCAGCCATCACAAATCACAACCCTACCCCGCGAGAAATCAAACCACACAATTAC
 
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JMFS099E01+           ACTCCGTACGACGCCCAGGAGCACTCAGAACTCCGTACCTCTGTCAGAGCTGCAACCGAG
JMFS091B09+           ACTCCGTACGACGCCCAGGAGCACTCAGAACTCCGTACCTCTGTCAGAGCTGCAACCGAG
JMFS033E07+           ACTCCGTACGACGCCCAGGAGCACTCAGAACTCCGTACCTCTGTCAGAGCTGCAACCGAG
                      ____________________________________________________________
consensus             ACTCCGTACGACGCCCAGGAGCACTCAGAACTCCGTACCTCTGTCAGAGCTGCAACCGAG
 
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JMFS099E01+           CAGCAAGCTGCTATGTCATTGATGAATTTAACCTGCATAAACCCAGCAGAAGCGATGCGC
JMFS091B09+           CAGCAAGCTGCTATGTCATTGATGAATTTAACCTGCATAAACCCAGCAGAAGCGATGCGC
JMFS033E07+           CAGCAAGCTGCTATGTCATTGATGAATTTAACCTGCATAAACCCAGCAGAAGCGATGCGC
                      ____________________________________________________________
consensus             CAGCAAGCTGCTATGTCATTGATGAATTTAACCTGCATAAACCCAGCAGAAGCGATGCGC
 
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JMFS099E01+           GAGCGCGATCTATGTGGAAATTGAGGTTGAAAACGTAATAAACAGGCGGAGATGAAGAAT
JMFS091B09+           GAGCGCGATCTATGTGGAAATTGAGGTTGAAAACGTAATAAACAGGCGGAGATGAAGAAT
JMFS033E07+           GAGCGCGATCTATGTGGAAATTGAGGTTGAAAACGTAATAAACAGGCGGAGATGAAGAAT
                      ____________________________________________________________
consensus             GAGCGCGATCTATGTGGAAATTGAGGTTGAAAACGTAATAAACAGGCGGAGATGAAGAAT
 
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JMFS099E01+           TTGAGAGAGACCACTTTAGGGTTCCAATGATTGAGCAATTAGGGGAGTAACAGAAA    
JMFS091B09+           TTGAGAGAGACCACTTTAGGGTTCCAATGATTGAGCAATTAGGGGAGTAACAGAAA    
JMFS033E07+           TTGAGAGAGACCACTTTAGGGTTCCAATGATTGAGCAATTAGGGGAGTAACAGAAAGCAA
                      ____________________________________________________________
consensus             TTGAGAGAGACCACTTTAGGGTTCCAATGATTGAGCAATTAGGGGAGTAACAGAAAGCAA
 
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JMFS033E07+           GACCAAAACGAACAAAAGTGGAGACTTCAAGCCGGAGGAAATGAAGGAGAAAGGGGAAAA
                      ____________________________________________________________
consensus             GACCAAAACGAACAAAAGTGGAGACTTCAAGCCGGAGGAAATGAAGGAGAAAGGGGAAAA