Contig 004781:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS028C03+                                         AAGGCAAGCAAGTAACTGTGGCTGCNTAAA
                      ____________________________________________________________
consensus                                           AAGGCAAGCAAGTAACTGTGGCTGCNTAAA
 
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JMFS028C03+           TGAAGATCAATGAACAATTGCTTTAGAGGAGAGAAATTCCTAATCCCTAATGNCCGGTTC
                      ____________________________________________________________
consensus             TGAAGATCAATGAACAATTGCTTTAGAGGAGAGAAATTCCTAATCCCTAATGNCCGGTTC
 
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JMFS028C03+           AGCAACCGCATTGCAGTGTCAAAGTTCCCAGCAGCAGCATGCTCAGCCGCAAGAGATGAT
                      ____________________________________________________________
consensus             AGCAACCGCATTGCAGTGTCAAAGTTCCCAGCAGCAGCATGCTCAGCCGCAAGAGATGAT
 
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JMFS028C03+           TTTTGCACCCAAATCTGGCTCACTGGCATGCCAGGGGTTGGAGCAATAAATACAGAAGAG
                      ____________________________________________________________
consensus             TTTTGCACCCAAATCTGGCTCACTGGCATGCCAGGGGTTGGAGCAATAAATACAGAAGAG
 
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JMFS028C03+           CGTGCATTAGTAGCAGTCTTTGGAGTCTCAGATTCAACAGGCAGATCCAGATCCTCCAAA
                      ____________________________________________________________
consensus             CGTGCATTAGTAGCAGTCTTTGGAGTCTCAGATTCAACAGGCAGATCCAGATCCTCCAAA
 
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JMFS028C03+           TCCCATCCTCCCTCAATTTCTTCTTGACCTTCGTCATCCTCCAGAACCATACTGATATCG
JMFS167D10+                                            TCATCCTCCAGAACCATACTGATATCG
                      ____________________________________________________________
consensus             TCCCATCCTCCCTCAATTTCTTCTTGACCTTCGTCATCCTCCAGAACCATACTGATATCG
 
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JMFS028C03+           CCATTCTGCAGATTTTCAACCTCACCAATATCCAACTCCTCACCCCAATCAGCATCAGCA
JMFS167D10+           CCATTCTGCAGATTTTCAACCTCACCAATATCCAACTCCTCACCCCAATCAGCATCAGCA
                      ____________________________________________________________
consensus             CCATTCTGCAGATTTTCAACCTCACCAATATCCAACTCCTCACCCCAATCAGCATCAGCA
 
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JMFS028C03+           GCTTCCTCATATTCTTCTTGTGCACCTCCATTGGGAATATTTAGGGTACCTTCAAATATG
JMFS167D10+           GCTTCCTCATATTCTTCTTGTGCACCTCCATTGGGAATATTTAGGGTACCTTCAAATATG
                      ____________________________________________________________
consensus             GCTTCCTCATATTCTTCTTGTGCACCTCCATTGGGAATATTTAGGGTACCTTCAAATATG
 
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JMFS028C03+           CCTTTAGTGACCATCAGTAAAGGCCAATCTCCACCACCAGATATAGGACTTGGAGGTAGC
JMFS167D10+           CCTTTAGTGACCATCAGTAAAGGCCAATCTCCACCACCAGATATAGGACTTGGAGGTAGC
                      ____________________________________________________________
consensus             CCTTTAGTGACCATCAGTAAAGGCCAATCTCCACCACCAGATATAGGACTTGGAGGTAGC
 
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JMFS028C03+           AGAAGAGAAGCCTTCTTTTCTGTTGGCAATGATGGGAGATTATCACCAAGTTCTTCAGCA
JMFS167D10+           AGAAGAGAAGCCTTCTTTTCTGTTGGCAATGATGGGAGATTATCACCAAGTTCTTCAGCA
JMFS039D09+                                            GGGACATTACCACCCAGTTCTGCTGCA
                      ____________________________________________________________
consensus             AGAAGAGAAGCCTTCTTTTCTGTTGGCAATGATGGGAGATTATCACCAAGTTCTTCAGCA
 
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JMFS028C03+           AGACGCTCAGCAATATCACTGAGCCCATGGACAGAGGCTGTGATGTAGGCAAGAGGCAGA
JMFS167D10+           AGACGCTCAGCAATATCACTGAGCCCATGGGCAGAGGCTGTGATGTAGGCAAGAGGCAGA
JMFS039D09+           AGGCGCTCAGCAATATCACTAAGCCCATGGATTGAGGCTGTGATGTAGGCCAGGGGAAGA
                      ____________________________________________________________
consensus             AGACGCTCAGCAATATCACTGAGCCCATGGACAGAGGCTGTGATGTAGGCAAGAGGCAGA
 
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JMFS028C03+           TGACCAGCATTCTCCAATATCT                                      
JMFS167D10+           TGACCAGCATTCTCCAATATCTTGACACGCTCACGAATGTCACCAAGGTACAAAGCATTG
JMFS039D09+           TGACCAGCATTCTCCAAAATCTTGACACGTTCACGAATGTCTCCAAGGTACAAAGCATTG
                      ____________________________________________________________
consensus             TGACCAGCATTCTCCAATATCTTGACACGTTCACGAATGTCTCCAAGGTACAAAGCATTG
 
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JMFS167D10+           TGAAACTGACCCATAACTTCATTTTTCACCTCAGCAATTTTCATCATCTTGGATAGCTTC
JMFS039D09+           TGGAACTGACCCATCACTTCATTTTTCACCTCAGCAATTTTCATCATCTTAGATAACTTC
                      ____________________________________________________________
consensus             TGGAACTGACCCATCACTTCATTTTTCACCTCAGCAATTTTCATCATCTTGGATAGCTTC
 
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JMFS167D10+           TCCAGGTTCCCCGTTATCAGATAAAGAAAAGAGAGCCTCTCAAAGTTCTTTGTCTTCTGG
JMFS039D09+           TCCAGATTCCCAGTTATCAGATATAGAAAAGATAGTCTTTCAAAGTTTTTCGTCTTCTGG
JMFS043E08+            CCAGATTCCCAGTTATCAGATATAGAAAAGATAGTCTTTCAAAGTTTTTCGTCTTCTGG
                      ____________________________________________________________
consensus             TCCAGATTCCCAGTTATCAGATATAGAAAAGATAGTCTTTCAAAGTTTTTCGTCTTCTGG
 
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JMFS167D10+           TATGCATATTCAACTATGCCAGCATTACCTTGCCGAAGGGCCTCCACTCCCAGCCTATAC
JMFS039D09+           TATGCATACTCAACAATGCCAGCATTACCCTGACGAAGGGCCTCCACCCCTAGCCTATAC
JMFS043E08+           TATGCATACTCAACAATGCCAGCATTACCCTGACGAAGGGCCTCCACCCCTAGCCTATAC
                      ____________________________________________________________
consensus             TATGCATACTCAACAATGCCAGCATTACCCTGACGAAGGGCCTCCACCCCTAGCCTATAC
 
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JMFS167D10+           CAGTGATCTTTCTCATCTATCTTTTTCGCAGATTCAAGTGCAA                 
JMFS039D09+           CAGTGATCTTTCTCATCTATCCTCTTAGCAGATTCAAGTGCAATCTCAATGTTCCCACTC
JMFS043E08+           CAGTGATCTTTCTCATCTATCCTCTTAGCAGATTCAAGTGCAATCTCAATGTTCCCACTC
                      ____________________________________________________________
consensus             CAGTGATCTTTCTCATCTATCCTCTTAGCAGATTCAAGTGCAATCTCAATGTTCCCACTC
 
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JMFS039D09+           TCAAGAGCTAAGTT                                              
JMFS043E08+           TCAAGAGCTAAGTTGAAACGAATACGCTCATCTTTCACAAAATGGAGAGCAACTTCTGGA
                      ____________________________________________________________
consensus             TCAAGAGCTAAGTTGAAACGAATACGCTCATCTTTCACAAAATGGAGAGCAACTTCTGGA
 
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JMFS043E08+           AAGCCTTTCTGCTGCAAATAGGCAATCATCGCTTGCCCACAGAGTTCTGAGTTCTTAATC
                      ____________________________________________________________
consensus             AAGCCTTTCTGCTGCAAATAGGCAATCATCGCTTGCCCACAGAGTTCTGAGTTCTTAATC
 
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JMFS043E08+           ATGTTCATAACCTGGTCATATCTCTTCCTTAGCAAGGATAGCTTGAAAATGTACTCGGTC
                      ____________________________________________________________
consensus             ATGTTCATAACCTGGTCATATCTCTTCCTTAGCAAGGATAGCTTGAAAATGTACTCGGTC
 
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JMFS043E08+           GAATCTATGATAATGGGACGGTTTTTCCCATCTCTGTCCAAGCAAAAAATGGTGTTCCCA
JMFS002B09-                                                                 TTCCCA
                      ____________________________________________________________
consensus             GAATCTATGATAATGGGACGGTTTTTCCCATCTCTGTCCAAGCAAAAAATGGTGTTCCCA
 
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JMFS043E08+           TAGATTTTAGTAATATATACTGGGATATCCAAGGTCTTGATAATTCCACTATCCCCATTA
JMFS002B09-           TTGATTTTAGTAATATATACTGGGATATCCAAGGTCTTGATAATTCCACTATCCCCATTA
                      ____________________________________________________________
consensus             TTGATTTTAGTAATATATACTGGGATATCCAAGGTCTTGATAATTCCACTATCCCCATTA
 
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JMFS043E08+           GGAAGGCAATACTTAATATGGGTCAGTGTTGTATATATGAAAACTCCATTGTCATCCCAG
JMFS002B09-           GGAAGGCAATACTTAATGTGGGTCAGTGTTGTATATATGAAAACTCCATTGTCATCCCAG
                      ____________________________________________________________
consensus             GGAAGGCAATACTTAATGTGGGTCAGTGTTGTATATATGAAAACTCCATTGTCATCCCAG
 
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JMFS043E08+           GCTCCACTCTTAA                                               
JMFS002B09-           GCTCCACTCTTAAGACAAATATCACCACCCTGTCCTCTGCCCAGCACAGTACATTTCCAG
JMFS085D08+                          CAAAAATCATCACCCTGTCCTCTGCTCTACACAGTAAGTTTCCAG
JMFS152G02+                                                                TTTCCTG
JMFS032C03+                          CAAATATCACCACCCTGTCCTCTGCCCGGCACAGTACATTTCCAG
                      ____________________________________________________________
consensus             GCTCCACTCTTAAGACAAATATCACCACCCTGTCCTCTGCCCTGCACAGTACATTTCCAG
 
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JMFS002B09-           TCCCAACATAAAATATTGCATCTTTAGCAATTGGAAGAATACTTTTCTTGACAATTTCAT
JMFS085D08+           TACCAGCATAAAATATTGCATCAGTGGCCATAGGAAGAACACTTTTCTTAACAATTTCAT
JMFS152G02+           TCCCAGCGTAAAATATTGCATCCGTAGCAATTGGAAGAGCACTTTTCTTGACAATTTCGT
JMFS032C03+           TCCCAGCATAAAATATTGCATCAGTAGCAATTGGAAGAATACTTTTCTTGACAATTTCAT
                      ____________________________________________________________
consensus             TCCCAGCATAAAATATTGCATCAGTAGCAATTGGAAGAATACTTTTCTTGACAATTTCAT
 
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JMFS002B09-           TTTTGAGATTCTTGACTAGAACTTGATTGGTACTCTTCTCAAGCACCGCAAACCTCTATC
JMFS085D08+           TTTTCAAATTTTTTACAAGAACCTGATTGGTGCTTTTCTCAAGAACTGCAAACCTATTTC
JMFS152G02+           TTTTGAGATTCTTGACTAGAACATTATTGGTGCTCTTCTCAAGCACTGCAAACCTATTTC
JMFS032C03+           TTTTGAGATTCTTGACTATAACTTGATTGGTACTCTTCTCAAGCACCGCAAACCTCTGCC
                      ____________________________________________________________
consensus             TTTTGAGATTCTTGACTAGAACTTGATTGGTACTCTTCTCAAGCACCGCAAACCTCTTTC
 
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JMFS002B09-           GAGCAATAAACACTGCTGATCCTCCACTTCCTCTCTTTGCATCTTAAACTGTATCACCCC
JMFS085D08+           GAGCAACAAAAATTGCTGATCCTCCAACTCCTCTTTTAGCATCTTGCACTGTGTCACCCC
JMFS152G02+           GAGCAATGAACACAGCAGATCCTCCAGTTCCTCTTTTTGCATCTTGCACAGTGTCACCCC
JMFS032C03+           GAGCAATAAACACTGCTGATCCTCCACTTCCTCTCTTTGCATCTTGAACTGTATCACCCC
                      ____________________________________________________________
consensus             GAGCAATAAACACTGCTGATCCTCCACTTCCTCTCTTTGCATCTTGAACTGTATCACCCC
 
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JMFS002B09-           TCCCATAACTGTCTTTGGGCACAACATATAGTTCATAAGAACCACCATCCATATCTGAAC
JMFS085D08+           TCCCAAAGCTATCTTTGGGCACAATATACAGTTCATAAGAACCCCCATCCACATCTGAAC
JMFS152G02+           TCCCAAAATTGTCTTTAGGCACAATATATAGTTCATAAGAACCCCCATCCACGTCAGAGC
JMFS032C03+           TCCCATAACTGTCTTTGGGCACAACATATAGTTCATAAGAACCACCATCCATATCTGAAC
                      ____________________________________________________________
consensus             TCCCATAACTGTCTTTGGGCACAACATATAGTTCATAAGAACCACCATCCATATCTGAAC
 
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JMFS002B09-           ATGTTAAGACAGCATTTTCAGTAGCACTGTATGAAAGGGTTCGGGGACCTTGATTTAAGC
JMFS085D08+           ATATTAAGACAGCATTTTCACTAGGACTGTAGGAAAGGGTTCGTGGACTTTGATTCAAGC
JMFS152G02+           ATATCAAGACAGCATTCTCAGTAGGACTGTATGAAAGGGAGCGTGGACTTTGATTCAAGC
JMFS032C03+           ATATTAAGACAGCATTTTCAGTAGCACTGTATGAAAGGGTTCGTGGACCTTGATTTAAGC
                      ____________________________________________________________
consensus             ATATTAAGACAGCATTTTCAGTAGCACTGTATGAAAGGGTTCGTGGACCTTGATTTAAGC
 
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JMFS002B09-           TGTTTGAACCAGGCCTACGAATTGGTATCAACTGTGTGTCTTTCTGAGTTGAATACTCAT
JMFS085D08+           CGTTTGAACCAGGCCTACGAATAGGTACCAGCTGTGTATCTTTCTGAGTTGAATACTCAT
JMFS152G02+           CGTTTGAACCAGGCCTACGAATTGGTACCAACTGCGTGTCTTTCTGAGTTGAATA     
JMFS032C03+           TGGTTGAACCAGGCCTACGAATTGGTATCAACTGTGTGTCCTTCTGAGTTGAATACTCAT
                      ____________________________________________________________
consensus             TGTTTGAACCAGGCCTACGAATTGGTATCAACTGTGTGTCTTTCTGAGTTGAATACTCAT
 
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JMFS002B09-           AGATACGAAGGAACCGGTCTTT                                      
JMFS085D08+           AGACTCGGAGGAACCGGTCTTTGACATAAAAGAGAGAATCACCACTAACGGAAAAAGCAG
JMFS032C03+           AGATACGAAGGAACCGGTCTTTAACATAAAACAGAGAATCTCCACTCACAGAAAATGCAG
                      ____________________________________________________________
consensus             AGATACGAAGGAACCGGTCTTTGACATAAAAGAGAGAATCTCCACTCACGGAAAATGCAG
 
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JMFS085D08+           GGCGTTCTCTCTCCAACTTGAAGACTATCATCCCACTGTCGTGACCTGCTGCTA      
JMFS032C03+           GGCGCTCTCTCTCTAGCTTGAACACTATCATCCCACTGTCATGCCCAGCTGCTAGAAGAT
                      ____________________________________________________________
consensus             GGCGTTCTCTCTCTAGCTTGAAGACTATCATCCCACTGTCGTGCCCTGCTGCTAGAAGAT