Contig 004780:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS011H06Sequence571004780 (5)ref|XP_011089241.1|5e-70PREDICTED: ABC transporter F family member 1 [Sesamum indicum]
JMFS030C02Sequence586004780 (5)gb|AFO64340.1|4e-11ABC transporter GCN1 [Hevea brasiliensis]
JMFS070F07Sequence627004780 (5)ref|XP_011089241.1|3e-65PREDICTED: ABC transporter F family member 1 [Sesamum indicum]
JMSF004I16Sequence342004780 (5)ref|XP_011089241.1|8e-21PREDICTED: ABC transporter F family member 1 [Sesamum indicum]
JMSF019B11Sequence531004780 (5)ref|XP_011089241.1|2e-59PREDICTED: ABC transporter F family member 1 [Sesamum indicum]706018186ref|NP_001146431.1|1e-53uncharacterized protein LOC100280013 [Zea mays] gb|ACL53957.1| unknown [Zea mays

Alignment

This contig is upended


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JMFS011H06+                                                                    TTC
JMFS070F07+                    ACGATCAAGTTGTTCCCCACCACCATCTTGTCCAGCCAAGGCTTCAACTTC
                      ____________________________________________________________
consensus                      ACGATCAAGTTGTTCCCCACCACCATCTTGTCCAGCCAAGGCTTCAACTTC
 
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JMFS011H06+           TTTCTCCAATTTCAACCTTTCTTCATCACAGCATATAACAGCCTCAAGTGAAGACATGTC
JMFS070F07+           TTTCTCCAATTTTAACCTTTCCTCGTCACAACTTATGACAGCCTGAAGTGAAGACATGTC
JMSF019B11+                                                           TGAAGACATGTC
                      ____________________________________________________________
consensus             TTTCTCCAATTTTAACCTTTCTTCGTCACAGCTTATGACAGCCTGAAGTGAAGACATGTC
 
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JMFS011H06+           AGATGCTTCAATCTCACGACTAAGGTGGAAAATATCCATATGCTCTGGTATGGGAAGTTC
JMFS070F07+           AGAAGCTTCAATCTCACGAGAAAGGTGATAAATATCCATATGATCTGGAATGGGTAGTTC
JMSF019B11+           AGATGCTTCAATCTCACGACTAAGGTGGAAAATATCCATATGCTCTGGTATGGGAAGTTC
                      ____________________________________________________________
consensus             AGATGCTTCAATCTCACGACTAAGGTGGAAAATATCCATATGCTCTGGTATGGGAAGTTC
 
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JMFS011H06+           CCGACATCCTATGGCAGTAAGAAGAGTGGATTTACCGCAGCCATTCAGCCCAAGAAAACC
JMFS070F07+           CCGGCATCCTATTGCAGTGAGAAGAGTGGATTTACCACAACCATTCAATCCCAATAATCC
JMSF019B11+           CCGACATCCTATGGCAGTAAGAAGAGTGGATTTACCGCAGCCATTCAGCCCAAGAAAACC
                      ____________________________________________________________
consensus             CCGACATCCTATGGCAGTAAGAAGAGTGGATTTACCGCAGCCATTCAGCCCAAGAAAACC
 
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JMSF004I16+                                         AGAATCAACTATAAGCTCATGTCCATGGAA
JMFS011H06+           ATAACGCCTCCCATAGTTGAGCTCCAGTTCAGAATCAACTATAAGCTCATGTCCATGGAA
JMFS070F07+           ATAACGTCTTCCATAGTTGAGTTCCAGTTCAGAATCAACTATAAGATCATGCCCATGGAA
JMSF019B11+           ATAACGCCTCCCATAGTTGAGCTCCAGTTCAGAATCAACTATAAGCTCATGTCCATGGAA
                      ____________________________________________________________
consensus             ATAACGCCTCCCATAGTTGAGCTCCAGTTCAGAATCAACTATAAGCTCATGTCCATGGAA
 
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JMSF004I16+           AGTGAGGGACAAAGACTCTATCCGAATATCTCTAGACAGAGGATGCGAACACAGAACGCC
JMFS011H06+           AGTGAGGGACAAAGACTCTATCCGAATATCTCTAGACAGAGGATGCGAACACAGAACGCC
JMFS070F07+           AGTAAGGGACAAAGACTCAATCCGAATATCTCTAGACAGAGGATGCGAACACAGAACCCC
JMSF019B11+           AGTGAGGGACAAAGACTCTATCCGAATATCTCTAGACAGAGGATGCGAACACAGAACGCC
JMFS030C02+                                CCGAATATCTCTAGACAGAGGATGCGAACACAGAACCCC
                      ____________________________________________________________
consensus             AGTGAGGGACAAAGACTCTATCCGAATATCTCTAGACAGAGGATGCGAACACAGAACGCC
 
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JMSF004I16+           CGTACACGTCCGATCGGATATCTGGAGCTCCTCAACTCCGTTGGCCAAATT         
JMFS011H06+           CGTACACGTCCGATCGGATATCTGGAGCTCCTCAACTCCGTTGGCCAAATT         
JMFS070F07+           AGTGCACGTCCGATCGGATATCAGAAGCTCCCCGACTCCGTTCGCCAAATT         
JMSF019B11+           CGTACACGTCCGATCGGATATCTGGAGCTCCTCAACTCCGTTGGCCAAATT         
JMFS030C02+           AGTGCACGTCCGATCGGATATCAGAAGCTCCCCGACTCCGTTCGCCAAATTATCGACGCT
                      ____________________________________________________________
consensus             CGTACACGTCCGATCGGATATCTGGAGCTCCTCAACTCCGTTGGCCAAATTATCGACGCT
 
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JMFS030C02+           ACTATTCTCCGCAGCAGATGCCGCCGCAGCCTTAGACGACGCGGCAGCCGCCGCAGCTTT
                      ____________________________________________________________
consensus             ACTATTCTCCGCAGCAGATGCCGCCGCAGCCTTAGACGACGCGGCAGCCGCCGCAGCTTT
 
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JMFS030C02+           GCGGCCTCTCTTGGCAGCGGCAGCTGCCTTCTTCTGCAATCCTCTTTTCTTGCTAGCGTC
                      ____________________________________________________________
consensus             GCGGCCTCTCTTGGCAGCGGCAGCTGCCTTCTTCTGCAATCCTCTTTTCTTGCTAGCGTC
 
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JMFS030C02+           CGACACCATCTATCAAATCAAAATCGCAAATCATAAAAATAAAATCTAACAAAAATTCAT
                      ____________________________________________________________
consensus             CGACACCATCTATCAAATCAAAATCGCAAATCATAAAAATAAAATCTAACAAAAATTCAT
 
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JMFS030C02+           AAAAATAAAACGAAGTAACATAAAATTGTTGAAAGCACCTTGATATCAGGAAAGATCTGA
                      ____________________________________________________________
consensus             AAAAATAAAACGAAGTAACATAAAATTGTTGAAAGCACCTTGATATCAGGAAAGATCTGA
 
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JMFS030C02+           AGTTCGCGAAACTAGGTTTTCGATCAACGCGTTATTCCCCCCGACTGTGAACGGAGTCCG
                      ____________________________________________________________
consensus             AGTTCGCGAAACTAGGTTTTCGATCAACGCGTTATTCCCCCCGACTGTGAACGGAGTCCG