Contig 004778:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN009H11+                                                         GAGCCAAGGAAAAC
rJMFF043C21-                                               GGTAACACTGAGCCAAGGAAAAC
                      ____________________________________________________________
consensus                                                  GGTAACACTGAGCCAAGGAAAAC
 
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JMFN009H11+           GCTTTTTATTAAACCAAACACAAGCAGATCTTCACATCATTCAGGGGATCCAACTTTTAT
rJMFF043C21-          GCTTTTTATTAAACCAAACACAAGCAGATCTTCACATCATTCAGGGGATCCAACTTTTAT
                      ____________________________________________________________
consensus             GCTTTTTATTAAACCAAACACAAGCAGATCTTCACATCATTCAGGGGATCCAACTTTTAT
 
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JMFN009H11+           TTAACTCAAGAAGGGACTTTCAGGGGAACTCAAATTCAAAGGAGCATTATGAAGATGAAC
rJMFF043C21-          TTAACTCAAGAAGGGACTTTCAGGGGAACTCAAATTCAAAGGAGCATTATGAAGATGAAC
                      ____________________________________________________________
consensus             TTAACTCAAGAAGGGACTTTCAGGGGAACTCAAATTCAAAGGAGCATTATGAAGATGAAC
 
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JMFN009H11+           AGGTTAAAAGCGCAAAAGTATAAAAACACTAGTATTTCCTATGAGCTAGCTCCCTTACTG
rJMFF043C21-          AGGTTAAAAGCGCAAAAGTATAAAAACACTAGTATTTCCTATGAGCTAGCTCCCTTACTG
                      ____________________________________________________________
consensus             AGGTTAAAAGCGCAAAAGTATAAAAACACTAGTATTTCCTATGAGCTAGCTCCCTTACTG
 
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JMFN009H11+           CGTCGGCCAGGTGTTTCTCGTTCTGAATGCTCTTAACCCACTTGGCGTTTATGTCGACTC
rJMFF043C21-          CGTCGGCCAGGTGTTTCTCGTTCTGAATGCTCTTAACCCACTTGGCGTTTATGTCGACTC
                      ____________________________________________________________
consensus             CGTCGGCCAGGTGTTTCTCGTTCTGAATGCTCTTAACCCACTTGGCGTTTATGTCGACTC
 
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JMFN009H11+           TCTCAAGGCTTTGCTTCAAACTCCTGGCAATGAAAGGCTTGGTGCGAGTTGCAAAGAACT
rJMFF043C21-          TCTCAAGGCTTTGCTTCAAACTCCTGGCAATGAAAGGCTTGGTGCGAGTTGCAAAGAACT
JMFS027G10+                                             AGGCTTGGTGCGAGTTGCAAAGAACT
                      ____________________________________________________________
consensus             TCTCAAGGCTTTGCTTCAAACTCCTGGCAATGAAAGGCTTGGTGCGAGTTGCAAAGAACT
 
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JMFN009H11+           CCTCCACCTCTTTCACCTTCTCGTATGATGAGAACGGAGACACAACTGCAGTGACAAAGC
rJMFF043C21-          CCTCCACCTCTTTCACCTTCTCGTATGATGAGAACGGAGACACAACTGCAGTGACAAAGC
JMFS027G10+           CCTCCACCTCTTTCACCTTCTCGTATGATGAGAACGGAGACACAACTGCAGTGACAAAGC
                      ____________________________________________________________
consensus             CCTCCACCTCTTTCACCTTCTCGTATGATGAGAACGGAGACACAACTGCAGTGACAAAGC
 
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JMFN009H11+           GGGTTACTAGAAATCCCGGACCATAAATTTTGCATAGGTTATCCCAGTTAACCTTAAACC
rJMFF043C21-          GGGTTACTAGAAATCCCGGACCATAAATTTTGCATAGGTTATCCCAGTTAACCTTAAACC
JMFS027G10+           GGGTTACTAGAAATCCCGGACCATAAATTTTGCATAGGTTATCCCAGTTAACCTTAAACC
                      ____________________________________________________________
consensus             GGGTTACTAGAAATCCCGGACCATAAATTTTGCATAGGTTATCCCAGTTAACCTTAAACC
 
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JMFN009H11+           AGTTCCAAGCAACTTCTCGTCCTTCAAAACTAACAGCAAGCCCAAAAACAGCATCTTGAC
rJMFF043C21-          AGTTCCAAGCAACTTCTCGTCCTTCAAAACTAACAGCAAGCCCAAAAACAGCATCTTGAC
JMFS027G10+           AGTTCCAAGCAACTTCTCGTCCTTCAAAACTAACAGCAAGCCCAAAAACAGCATCTTGAC
                      ____________________________________________________________
consensus             AGTTCCAAGCAACTTCTCGTCCTTCAAAACTAACAGCAAGCCCAAAAACAGCATCTTGAC
 
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JMFN009H11+           TCCGGACCTCCGATGACAGCATGAAGTTCAGAACTTCAAGAATGATTTCAGGGTCCCGAG
rJMFF043C21-          TCCGGACCTCCGATGACAGCATGAAGTTCAGAACTTCAAGAATGATTTCAGGGTCCCGAG
JMFS027G10+           TCCGGACCTCCGATGACAGCATGAAGTTCAGAACTTCAAGAATGATTTCAGGGTCCCGAG
                      ____________________________________________________________
consensus             TCCGGACCTCCGATGACAGCATGAAGTTCAGAACTTCAAGAATGATTTCAGGGTCCCGAG
 
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JMFN009H11+           AAGATGCTAATGAACCTAA                                         
rJMFF043C21-          AAGATGCTAATGAACCTAAGATGCGAGTCTTCTCTTGGCTAAGGTCACTTTCTTTGTAAA
JMFS027G10+           AAGATGCTAATGAACCTAAGATGCGAGTCTTCTCTTGGCTAAGGTCACTTTCTTTGTAAA
                      ____________________________________________________________
consensus             AAGATGCTAATGAACCTAAGATGCGAGTCTTCTCTTGGCTAAGGTCACTTTCTTTGTAAA
 
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JMFS027G10+           CTCTCAAGAGTGCTTCAAACCCTGATCTATTAGATTTGTTGACATTCTGCATTACCGCCA
                      ____________________________________________________________
consensus             CTCTCAAGAGTGCTTCAAACCCTGATCTATTAGATTTGTTGACATTCTGCATTACCGCCA
 
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JMFS027G10+           CATTTACTGCCTTTCTCAAGTCTGGAGGAAGAACAGGTGTATTTCTATCATCGAGGAATA
                      ____________________________________________________________
consensus             CATTTACTGCCTTTCTCAAGTCTGGAGGAAGAACAGGTGTATTTCTATCATCGAGGAATA
 
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JMFS027G10+           TATGGAAACGCCTGTTTGCTTCATTTATTGTTGCATCATGTCCAAATTCTGCCAATGCAG
                      ____________________________________________________________
consensus             TATGGAAACGCCTGTTTGCTTCATTTATTGTTGCATCATGTCCAAATTCTGCCAATGCAG
 
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JMFS027G10+           TAAGAAGTTCTCCCCTCAACATGGCATCTAAATGGCCTTCCCCTTGTTTGGGATCCCAGC
                      ____________________________________________________________
consensus             TAAGAAGTTCTCCCCTCAACATGGCATCTAAATGGCCTTCCCCTTGTTTGGGATCCCAGC
 
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JMFS027G10+           CAAGCCTCTCTGCAGAATACTGGAAAAGGTTAATGAAAAACAGCTTGATGTCATTAAGTA
                      ____________________________________________________________
consensus             CAAGCCTCTCTGCAGAATACTGGAAAAGGTTAATGAAAAACAGCTTGATGTCATTAAGTA