Contig 004777:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029E01Sequence422010790 (3)775004777 (4)ref|XP_009802115.1|210PREDICTED: uncharacterized protein LOC104247728 [Nicotiana sylvestris]
JMFS025E02Sequence642004777 (4)ref|XP_009802115.1|139PREDICTED: uncharacterized protein LOC104247728 [Nicotiana sylvestris]
JMSF008H20Sequence328010790 (3)763004777 (4)ref|XP_009802115.1|210PREDICTED: uncharacterized protein LOC104247728 [Nicotiana sylvestris]
JMSF034B18Sequence716010790 (3)ref|XP_011086214.1|177PREDICTED: uncharacterized protein LOC105168011 [Sesamum indicum] ref|XP_0110862637004777 (4)ref|XP_009802115.1|153PREDICTED: uncharacterized protein LOC104247728 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF008H20+                          GCTAAGAAAGAAGATCTGTCAAATTGGGATGCAACCGAGACATT
                      ____________________________________________________________
consensus                             GCTAAGAAAGAAGATCTGTCAAATTGGGATGCAACCGAGACATT
 
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rJMSF008H20+          TAGGCTTTTGACAGCGCAGAAGAAAAAATGAAAGTAGCAACTGAGATGTGGGAGAAGCTT
rJMFF029E01+               TTTTGACAGCGCAGAAGAAAAAATGAAAGTAGCAACTGAGATGTGGGAGAAGCTT
                      ____________________________________________________________
consensus             TAGGCTTTTGACAGCGCAGAAGAAAAAATGAAAGTAGCAACTGAGATGTGGGAGAAGCTT
 
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rJMSF008H20+          GAAGAACAGAGACTTAAAGAGCTGAAGGATCCTAATGCAAGCAAGAAAGATGAACTTAAA
rJMFF029E01+          GAAGAACAGAGACTTAAAGAGCTGAAGGATCCTAATGCAAGCAAGAAAGATGAACTTAAA
                      ____________________________________________________________
consensus             GAAGAACAGAGACTTAAAGAGCTGAAGGATCCTAATGCAAGCAAGAAAGATGAACTTAAA
 
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rJMSF008H20+          AGAAGGAAGAAGCAGGGAAATGGTCCTGACGCTGAATCCTCGGCTGCTGGTGAAATTTCT
rJMFF029E01+          AGAAGGAAGAAGCAGGGAAATGGTCCTGACGCTGAATCCTCGGCTGCTGGTGAAATTTCT
rJMSF034B18+                                                        CTGGTGAAATTTCT
                      ____________________________________________________________
consensus             AGAAGGAAGAAGCAGGGAAATGGTCCTGACGCTGAATCCTCGGCTGCTGGTGAAATTTCT
 
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rJMSF008H20+          GCTGATGAAGCTGCAGAACAAGCTGCTGTAATGAGATCTCAAATACATTTGTTTTGGGGT
rJMFF029E01+          GCTGATGAAGCTGCAGAACAAGCTGCTGTAATGAGATCTCAAATACATTTGTTTTGGGGT
rJMSF034B18+          GCTGATGAAGCTGCAGAACAAGCTGCTGTAATGAGATCTCAAATACATTNGTTTTGGGGT
JMFS025E02-                             CAAGCTGCTGTAATGAGATCTCAAATACATTTGTTTTGGGGT
                      ____________________________________________________________
consensus             GCTGATGAAGCTGCAGAACAAGCTGCTGTAATGAGATCTCAAATACATTTGTTTTGGGGT
 
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rJMSF008H20+          AACATGCTCTTTGAGCGGTCTCAAGTTGAATGTAAATTGGGGTTGGCTGGCTGGAAGAAC
rJMFF029E01+          AACATGCTCTTTGAGCGGTCTCAAGTTGAATGTAAATTGGGGTTGGCTGGCTGGAAGAAC
rJMSF034B18+          AACATGCTCTTTGAGCGGTCTCAAGTTGAATGTAAATTGGGGTTGGCTGGCTGGAAGAAC
JMFS025E02-           AACATGCTCTTTGAGCGGTCTCAAGTTGAATGTAAATTGGGGTTGGCTGGCTGGAAGAAC
                      ____________________________________________________________
consensus             AACATGCTCTTTGAGCGGTCTCAAGTTGAATGTAAATTGGGGTTGGCTGGCTGGAAGAAC
 
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rJMSF008H20+          AACCTTGATACTGCAGTTGAGAGGTTTAAGCTTGCTGGGGCTTCTGAGGCTGATATCTCG
rJMFF029E01+          AACCTTGATACTGCAGTTGAGAGGTTTAAGCTTGCTGGGGCTTCTGAGGCTGATATCTCG
rJMSF034B18+          AACCTTGATACTGCAGTTGAGAGGTTTAAGCTTGCTGGGGCTTCTGAGGCTGATATCTCG
JMFS025E02-           AACCTTGATACTGCAGTTGAGAGGTTTAAGCTTGCTGGGGCTTCTGAGGCTGATATCTCG
                      ____________________________________________________________
consensus             AACCTTGATACTGCAGTTGAGAGGTTTAAGCTTGCTGGGGCTTCTGAGGCTGATATCTCG
 
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rJMSF008H20+          ACCGTTCTGAAGAATCATTGCTCCAATGAAGCAGCTGAGGAACCTGAGAAAAATGTTGCC
rJMFF029E01+          ACCGTTCTGAAGAATCATTGCTCCAATGAAGCAGCTGAGGAACCTGAGAAAAATGTTGCC
rJMSF034B18+          ACCGTTCTGAAGAATCATTGCTCCAATGAAGCAGCTGAGGAACCTGAGAAAAATGTTGCC
JMFS025E02-           ACCGTTCTGAAGAATCATTGCTCCAATGAAGCAGCTGAGGAACCTGAGAAAAATGTTGCC
                      ____________________________________________________________
consensus             ACCGTTCTGAAGAATCATTGCTCCAATGAAGCAGCTGAGGAACCTGAGAAAAATGTTGCC
 
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rJMSF008H20+          AGCATTACGGCTAAAGTGGCTAATGAAACAGAAGACAAGGATGATGCCGATCAAATGTAG
rJMFF029E01+          AGCATTACGGCTAAAGTGGCTAATGAAACAGAAGACAAGGATGATGCCGATCAAATGTAG
rJMSF034B18+          AGCATTACGGCTAAAGTGGCTAATGAAACAGAAGACAAGGATGATGCCGATCAAATGTAG
JMFS025E02-           AGCATTACGGCTAAAGTGGCTAATGAAACAGAAGACAAGGATGATGCCGATCAAATGTAG
                      ____________________________________________________________
consensus             AGCATTACGGCTAAAGTGGCTAATGAAACAGAAGACAAGGATGATGCCGATCAAATGTAG
 
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rJMSF008H20+          TGAATCTTTGCATTTACGTGACAAGGATGATGCCGATCAAATGTAGGGAATCTTTGCATT
rJMFF029E01+          TGAATCTTTGCATTTACGTGACAAGGATGATGCCGATCAAATGTAGGGAATCTTTGCATT
rJMSF034B18+          TGAATCTTTGCATTTACGTGACAAGGATGATGCCGATCAAATGTAGGGAATCTTTGCATT
JMFS025E02-           TGAATCTTTGCATTTACGTGACAAGGATGATGCCGATCAAATGTAGGGAATCTTTGCATT
                      ____________________________________________________________
consensus             TGAATCTTTGCATTTACGTGACAAGGATGATGCCGATCAAATGTAGGGAATCTTTGCATT
 
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rJMSF008H20+          GCATGGTGCCTTTAATCAATCAACTACCTTAATGCCCTCATTGCAGGTCCTCGTTGGAGG
rJMFF029E01+          GCATGGTGCCTTTAATCAATCAACTACCTTAATGCCCTCATTGCAGGTCCTCGTTGGAGG
rJMSF034B18+          GCATGGTGCCTTTAATCAATCAACTACCTTAATGCCCTCATTGCAGGTCCTCGTTGGAGG
JMFS025E02-           GCATGGTGCCTTTAATCAATCAACTACCTTAATGCCCTCATTGCAGGTCCTCGTTGGAGG
                      ____________________________________________________________
consensus             GCATGGTGCCTTTAATCAATCAACTACCTTAATGCCCTCATTGCAGGTCCTCGTTGGAGG
 
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rJMSF008H20+          AAATGAAATTGTCATTTTAAGGATCAAGTTTGAGGAGCCATTTATTTTTATATTAAGGTA
rJMFF029E01+          AAATGAAATTGTCATTTTAAGGATCAAGTTTGAGGAGCCATTTATTTTTATATTAAGGTA
rJMSF034B18+          AAATGAAATTGTCATTTTAAGGATCAAGTTNGAGGAGCCATTTATTTTTATATTAAGGTA
JMFS025E02-           AAATGAAATTGTCATTTTAAGGATCAAGTTTGAGGAGCCATTTATTTTTATATTAAGGTA
                      ____________________________________________________________
consensus             AAATGAAATTGTCATTTTAAGGATCAAGTTTGAGGAGCCATTTATTTTTATATTAAGGTA
 
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rJMSF008H20+          GCAAATTGGCTTCACATTTTTTGAAGATTGCACTTTCAGGATATTTATTCTGTGGCAAC 
rJMFF029E01+          GCAAATTGGCTTCACATTTTTTGAAGATTGCACTTTCAGGATATTTATTCTGTGGCAACA
rJMSF034B18+          GCAAATTGGCTTCACATNTTTTGAAGATTGCACTTTCAGGATATTTATTCTGTGGCAACA
JMFS025E02-           GCAAATTGGCTTCACATTTTTTGAAGATTGCACTTTCAGGATATTTATTCTGTGGCAACA
                      ____________________________________________________________
consensus             GCAAATTGGCTTCACATTTTTTGAAGATTGCACTTTCAGGATATTTATTCTGTGGCAACA
 
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rJMFF029E01+          AGTTTTTAACTGTCGTCATTGTATGGCAACTAGTTTTTAACTGTCGATCTGACGAAAGTT
rJMSF034B18+          AGTTTTTAACTGTCGTCATTGTATGGCAACTAGTTTTTAACTGTCGATCTGACGAAAGTT
JMFS025E02-           AGTTTTTAACTGTCGTCATTGTATGGCAACTAGTTTTTAACTGTCGATCTGACGAAAGTT
                      ____________________________________________________________
consensus             AGTTTTTAACTGTCGTCATTGTATGGCAACTAGTTTTTAACTGTCGATCTGACGAAAGTT
 
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rJMSF034B18+          TTCCCTNGTTGATGAGCTTCTAT                                     
JMFS025E02-           TTCCCTTGTTGATGAGCTTCTATATGAACACTTCCACGTCCATGAAAACAATATTTGGCT
                      ____________________________________________________________
consensus             TTCCCTTGTTGATGAGCTTCTATATGAACACTTCCACGTCCATGAAAACAATATTTGGCT