Contig 004774:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023G01Sequence551004774 (2)ref|XP_007208068.1|5e-16hypothetical protein PRUPE_ppa001736mg [Prunus persica] gb|EMJ09267.1| hypotheti
JMFS023G02Sequence571004774 (2)ref|XP_009759610.1|5e-21PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS023G02+ ATCATCCAAGACTCTCCTCATCGCATCAAAA
JMFS023G01+ TCGCATCAAAA
                      ____________________________________________________________
consensus ATCATCCAAGACTCTCCTCATCGCATCAAAA
 
. : . : . : . : . : . :
JMFS023G02+ GATCCCGCTTTTCCAAGCTTACGGAGAATCTCCTCGCAAATCTGCCGACTGGGTTCAATC
JMFS023G01+ GATCCCGCTTTTCCAAGCTTACGGAGAATCTCCTCGCAAATCTGCCGATTGGGTTCAATC
                      ____________________________________________________________
consensus GATCCCGCTTTTCCAAGCTTACGGAGAATCTCCTCGCAAATCTGCCGATTGGGTTCAATC
 
. : . : . : . : . : . :
JMFS023G02+ TCAGGCTGCTCTAAAGCCCATTTAAAGAGGTTAAGAGCTGAGGCTTCATCTTTCTCCTGA
JMFS023G01+ TCAGGCTGCTCTAAAGCCCATTTAAAGAGGTTAAGAGCTGAGGCTTCATCTTTCTCCTGA
                      ____________________________________________________________
consensus TCAGGCTGCTCTAAAGCCCATTTAAAGAGGTTAAGAGCTGAGGCTTCATCTTTCTCCTGA
 
. : . : . : . : . : . :
JMFS023G02+ CGAAGAGTATCCAGAAGCTGCTTCTGGGTGAAGTCTGGTGGGAGGTGTTTGGATTTGAGG
JMFS023G01+ GGAAGAGTATCCAGAAGCTGCTTCTGGGTGAAGTCTGGTGGGAGGTGTTTGGATTTGAGG
                      ____________________________________________________________
consensus GGAAGAGTATCCAGAAGCTGCTTCTGGGTGAAGTCTGGTGGGAGGTGTTTGGATTTGAGG
 
. : . : . : . : . : . :
JMFS023G02+ AGTGAAATTGTGGCGGCAGAGGGTGAATTTGTGGCCGAGATTGAGGCAAAGAGCTCACGG
JMFS023G01+ AGTGAAATTGTGGCGGCAGAGGGTGAATTTGTGGCCGAGATTGAGGCAAAGAGCTCACGG
                      ____________________________________________________________
consensus AGTGAAATTGTGGCGGCAGAGGGTGAATTTGTGGCCGAGATTGAGGCAAAGAGCTCACGG
 
. : . : . : . : . : . :
JMFS023G02+ CGTTGTGATAATGTGAAAGAAATGAGCTTTTGAGAGTTTAAGGATATGGTAAAAGGGAAC
JMFS023G01+ CGTTGTGATAATGTGAAAGAAATGAGCTTTTGAGAGTTTAAGGATATGGTAAAAGGGAAC
                      ____________________________________________________________
consensus CGTTGTGATAATGTGAAAGAAATGAGCTTTTGAGAGTTTAAGGATATGGTAAAAGGGAAC
 
. : . : . : . : . : . :
JMFS023G02+ GCATTTACAAAGCATGATGAGACACCCATTGATGCAATTCAACAAGCATGTAGCATGCAA
JMFS023G01+ GCATTTACAAAGCATGATGAGACACCCATTGATGCAATTCAACAAGCATGTAGCATGCAA
                      ____________________________________________________________
consensus GCATTTACAAAGCATGATGAGACACCCATTGATGCAATTCAACAAGCATGTAGCATGCAA
 
. : . : . : . : . : . :
JMFS023G02+ TATCAAAGTCTGGATAGAAACTTATACCTTAGCTCGAGATATTTGCACATACAGCCAAAT
JMFS023G01+ TATCAAAGTCTGGATAGAAACTTATACCTTAGCTCGAGATATTTGCACATACAGCCAAAT
                      ____________________________________________________________
consensus TATCAAAGTCTGGATAGAAACTTATACCTTAGCTCGAGATATTTGCACATACAGCCAAAT
 
. : . : . : . : . : . :
JMFS023G02+ CAGTAGAGGACAGTGAAGGGTGTTGTGGTGCAACACAGAAGAATTCAATTGCAGGTGATA
JMFS023G01+ CAGTAGAGGACAGTGAAGGGTGTTGTGGTGCAACACAGAAGAATTCAATTGCAGGTGATA
                      ____________________________________________________________
consensus CAGTAGAGGACAGTGAAGGGTGTTGTGGTGCAACACAGAAGAATTCAATTGCAGGTGATA
 
. : . : . : . : . : . :
JMFS023G02+ CTGAAAAGTGAAAACTGCGATTCTTTAATGGGTGGTTTTGTCATGGATAAGAAAGTGAGC
JMFS023G01+ CTGAAAAGTGAAAACTGCGATTCTTTAATGGGTGGTTTTGTCATGGATAAGAAAGTGAGC
                      ____________________________________________________________
consensus CTGAAAAGTGAAAACTGCGATTCTTTAATGGGTGGTTTTGTCATGGATAAGAAAGTGAGC