| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS016F12 | Sequence | 629 | 004773 (6) | ref|XP_009791480.1| | 8e-43 | PREDICTED: uncharacterized protein LOC104238717 isoform X3 [Nicotiana sylvestri | |||||
| JMFS022D05 | Sequence | 617 | 004773 (6) | ref|XP_009791475.1| | 5e-40 | PREDICTED: uncharacterized protein LOC104238717 isoform X1 [Nicotiana sylvestri | |||||
| JMFS022F02 | Sequence | 603 | 004773 (6) | ref|XP_009791480.1| | 3e-37 | PREDICTED: uncharacterized protein LOC104238717 isoform X3 [Nicotiana sylvestri | |||||
| JMFS082C08 | Sequence | 616 | 004773 (6) | ref|XP_009791480.1| | 7e-53 | PREDICTED: uncharacterized protein LOC104238717 isoform X3 [Nicotiana sylvestri | |||||
| JMFS124G10 | Sequence | 576 | 004773 (6) | ref|XP_011084778.1| | 3e-28 | PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X2 [Sesamum | |||||
| JMSF022A06 | Sequence | 647 | 004773 (6) | ref|XP_009607285.1| | 4e-47 | PREDICTED: serine/arginine repetitive matrix protein 2-like isoform X8 [Nicotia | 809 | 017142 | ref|XP_004235599.1| | 4e-55 | PREDICTED: protein ROOT HAIR DEFECTIVE 3 isoform X2 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS124G10+ ACCCGCTCCGTCCAATTTGG
____________________________________________________________
consensus ACCCGCTCCGTCCAATTTGG
. : . : . : . : . : . :
JMFS124G10+ ACTCTTCGCATCGGGGAGGCAGACCTTCTCGGTGAAGCAGATCGCGCTAGAGCCCGACTT
____________________________________________________________
consensus ACTCTTCGCATCGGGGAGGCAGACCTTCTCGGTGAAGCAGATCGCGCTAGAGCCCGACTT
. : . : . : . : . : . :
JMFS124G10+ CGCTCTACCGATGGTTGATCCTCCTCGGTCGTGCAAGACGATTCCTCGCCTTCTGATGAA
____________________________________________________________
consensus CGCTCTACCGATGGTTGATCCTCCTCGGTCGTGCAAGACGATTCCTCGCCTTCTGATGAA
. : . : . : . : . : . :
JMFS124G10+ CTCTGCCTCTCGATTTGTGCAGCTTTAGCAGGAGAGGCACCATATCTTACGGGTTGCTCT
JMFS082C08+ TACGGGTTGCTCT
____________________________________________________________
consensus CTCTGCCTCTCGATTTGTGCAGCTTTAGCAGGAGAGGCACCATATCTTACGGGTTGCTCT
. : . : . : . : . : . :
JMFS124G10+ GAAAGCAGCAATGGCTTAGACGAGACCCGAGAATCCTCTTCTGAACCACGTTTATCATTC
JMFS082C08+ GAAAGCAGCAATGGCTTAGACGAGACCCGAGAATCCTCTTCTGAACCACGTTTATCATTC
____________________________________________________________
consensus GAAAGCAGCAATGGCTTAGACGAGACCCGAGAATCCTCTTCTGAACCACGTTTATCATTC
. : . : . : . : . : . :
JMFS124G10+ CCCGAATAATTTTCTACAATCTTTTGTAGCGAGTTCCTCAAATCGAAAGCTCCAAAATGA
JMFS082C08+ CCCGAATAATTTTCTACAATCTTTTGTAGCGAGTTCCTCAAATCGAAAGCTCCAAAATGA
____________________________________________________________
consensus CCCGAATAATTTTCTACAATCTTTTGTAGCGAGTTCCTCAAATCGAAAGCTCCAAAATGA
. : . : . : . : . : . :
JMFS124G10+ TTGCTGAACTTTCCAATCTCAACAATCTCCTCGGGAGCAGCTTGGTCAAAAGCATCAGCG
JMFS082C08+ TTGCTGAACTTTCCAATCTCAACAATCTCCTCGGGAGCAGCTTGGTCAAAAGCATCAGCG
JMSF022A06+ CTCAACAATCTCCTCGGGAGCAGCTTGGTCAAAAGCATCAGCG
____________________________________________________________
consensus TTGCTGAACTTTCCAATCTCAACAATCTCCTCGGGAGCAGCTTGGTCAAAAGCATCAGCG
. : . : . : . : . : . :
JMFS124G10+ AGATCGCTTCTTAACGCACCGAGCCTCAAGTCCATTGCTCGAAGCAATTCGTTCTTGGAA
JMFS082C08+ AGATCGCTTCTTAACGCACCGAGCCTCAAGTCCATTGCTCGAAGCAATTCGTTCTTGGAA
JMSF022A06+ AGATCGCTTCTTAACGCACCGAGCCTCAAGTCCATTGCTCGAAGCAATTCGTTCTTGGAA
____________________________________________________________
consensus AGATCGCTTCTTAACGCACCGAGCCTCAAGTCCATTGCTCGAAGCAATTCGTTCTTGGAA
. : . : . : . : . : . :
JMFS124G10+ GAATCCGATGTAGCAGAATCATCATCAGCCTTTGCATATAAAGAAAGGTGAAATCCCCGG
JMFS082C08+ GAATCCGATGTAGCAGAATCATCATCAGCCTTTGCATATAAAGAAAGGTGAAATCCCCGG
JMSF022A06+ GAATCCGATGTAGCAGAATCATCATCAGCCTTTGCATATAAAGAAAGGTGAAATCCCCGG
JMFS016F12+ CATCAGCCTTTGCATATAAAGAAAGGTGAAATCCCCGG
JMFS022F02+ CGG
JMFS022D05+ AAAGGTGAAATCNCCGG
____________________________________________________________
consensus GAATCCGATGTAGCAGAATCATCATCAGCCTTTGCATATAAAGAAAGGTGAAATCCCCGG
. : . : . : . : . : . :
JMFS124G10+ GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
JMFS082C08+ GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
JMSF022A06+ GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
JMFS016F12+ GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
JMFS022F02+ GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
JMFS022D05+ GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
____________________________________________________________
consensus GCTTCCTCCAGCTGAGATATCTCTTTCTCCACCGCATTTGCTTTATCCAATATATCCCCC
. : . : . : . : . : . :
JMFS124G10+ GAATTAATAATATTAA
JMFS082C08+ GAATTAATAATATTAAGAAACCTAATTAAAGTGGATTTCGAAAACCATTTAGCATTGCTA
JMSF022A06+ GAATTAATAATATTAAGAAACCTAATTAAAGTGGATTTCGAAAACCATTTAGCATTGCTA
JMFS016F12+ GAATTAATAATATTAAGAAACCTAATTAAAGTGGATTTCGAAAACCATTTAGCATTGCTA
JMFS022F02+ GAATTAATAATATTAAGAAACCTAATTAAAGTGGATTTCGAAAACCATTTAGCATTGCTA
JMFS022D05+ GAATTAATAATATTAAGAAACCTAATTAAAGTGGATTTCGAAAACCATTTAGCATTGCTA
____________________________________________________________
consensus GAATTAATAATATTAAGAAACCTAATTAAAGTGGATTTCGAAAACCATTTAGCATTGCTA
. : . : . : . : . : . :
JMFS082C08+ ACATTATCCGGGGGTTCGAGTTTAAAAGAAGCATCCCGCCCTTTCGAGCTCAAAGCTTTA
JMSF022A06+ ACATTATCCGGGGGTTCGAGTTTAAAAGAAGCATCCCGCCCTTTCGAGCTCAAAGCTTTA
JMFS016F12+ ACATTATCCGGGGGTTCGAGTTTAAAAGAAGCATCCCGCCCTTTCGAGCTCAAAGCTTTA
JMFS022F02+ ACATTATCCGGGGGTTCGAGTTTAAAAGAAGCATCCCGCCCTTTCGAGCTCAAAGCTTTA
JMFS022D05+ ACATTATCCGGGGGTTCGAGTTTAAAAGAAGCATCCCGCCCTTTCGAGCTCAAAGCTTTA
____________________________________________________________
consensus ACATTATCCGGGGGTTCGAGTTTAAAAGAAGCATCCCGCCCTTTCGAGCTCAAAGCTTTA
. : . : . : . : . : . :
JMFS082C08+ ACTTTCGAAGAATGCTGTGCCAGTTGCTCGAGAACCCCAGAAGCCACCGCCTCTACCTCG
JMSF022A06+ ACTTTCGAAGAATGCTGTGCCAGTTGCTCGAGAACCCCAGAAGCCACCGCCTCTACCTCG
JMFS016F12+ ACTTTCGAAGAATGCTGTGCCAGTTGCTCGAGAACCCCAGAAGCCACCGCCTCTACCTCG
JMFS022F02+ ACTTTCGAAGAATGCTGTGCCAGTTGCTCGAGAACCCCAGAAGCCACCGCCTCTACCTCG
JMFS022D05+ ACTTTCGAAGAATGCTGTGCCAGTTGCTCGAGAACCCCAGAAGCCACCGCCTCTACCTCG
____________________________________________________________
consensus ACTTTCGAAGAATGCTGTGCCAGTTGCTCGAGAACCCCAGAAGCCACCGCCTCTACCTCG
. : . : . : . : . : . :
JMFS082C08+ TTGTCCCAACATATGCAAGCCTCGTACCTGTTCTGGCTTGGATAAATCTGGAATTCAACA
JMSF022A06+ TTGTCCCAACATATGCAAGCCTCGTACCTGTTCTGGCTTGGATAAATCTGGAATTCAACA
JMFS016F12+ TTGTCCCAACATATGCAAGCCTCGTACCTGTTCTGGCTTGGATAAATCTGGAATTCAACA
JMFS022F02+ TTGTCCCAACATATGCAAGCCTCGTACCTGTTCTGGCTTGGATAAATCTGGAATTCAACA
JMFS022D05+ TTGTCCCAACATATGCAAGCCTCGTACCTGTTCTGGCTTGGATAAATCTGGAATTCAACA
____________________________________________________________
consensus TTGTCCCAACATATGCAAGCCTCGTACCTGTTCTGGCTTGGATAAATCTGGAATTCAACA
. : . : . : . : . : . :
JMFS082C08+ TAA
JMSF022A06+ TAATCCAACGAAACATCAGTATGGATCCCACCCGCCATCCTTGAATCTCAAGAAAACTCG
JMFS016F12+ TAATCCAAAGAAACATCAGTATGGATCCCACCCGCCATCCTTGAATCTCAAGAAAACTCG
JMFS022F02+ TAATCCAACGAAACATCAGTATGGATCCCACCCGCCATCCTTGAATCTCAAGAAAACTCG
JMFS022D05+ TAATCCAACGAAACATCAGTATGGATCCCACCCGCCATCCTTGAATCTCAAGAAAACTCG
____________________________________________________________
consensus TAATCCAACGAAACATCAGTATGGATCCCACCCGCCATCCTTGAATCTCAAGAAAACTCG
. : . : . : . : . : . :
JMSF022A06+ AGCCTTGAAATTCTAAGCCTTCAGCACCAGCCCAAA-TTCATTCCATCTGGTTCAACAGA
JMFS016F12+ AGCCTTGAAATTCTAAGCCTTCAGCACCAGCCCAAATTTCATTCCATCTGGTTCAACAGA
JMFS022F02+ AGCCTTGAAATTCTAAGCCTTCAGCACCAGCCCAAATTTCATTCCATCTGGTTCAACAGA
JMFS022D05+ AGCCTTGAAATTCTAAGCCTTCAGCACCAGCCCAAATTTCATTCCATCTGGTTCAACAGA
____________________________________________________________
consensus AGCCTTGAAATTCTAAGCCTTCAGCACCAGCCCAAATTTCATTCCATCTGGTTCAACAGA
. : . : . : . : . : . :
JMSF022A06+ GCCTGG
JMFS016F12+ GCCTGGTGGGAATGAAGCTGAACAGAGCTCAAAGATGGAAGCTTTGGTGAAGATCTAAAA
JMFS022F02+ GCCTGGTGGGAATGAAGCTGAACAGAGCTCAAAGATGGAAGCTTTGGTGAAGATCTAAAA
JMFS022D05+ GCCTGGTGGGAATGAAGCTGAACAGAGCTCAAAGATGGAAGCTTTGGTGAAGATCTAAAA
____________________________________________________________
consensus GCCTGGTGGGAATGAAGCTGAACAGAGCTCAAAGATGGAAGCTTTGGTGAAGATCTAAAA
. : . : . : . : . : . :
JMFS016F12+ TGGGATTTGGGGCAAGAATGAAAAAGTTGCAGCCTTTTTCTCTTTTTCTCTGTTTATTTC
JMFS022F02+ TGGGATTTGGGGCAAGAATGAAAAAGTTGCAGCCTTTTTCTCTTTTTCTCTGTTTATTTC
JMFS022D05+ TGGGATTTGGGGCAAGAATGAAAAAGTTGCAGCCTTTTTCTCTTTTTCTCTGTTTATTTC
____________________________________________________________
consensus TGGGATTTGGGGCAAGAATGAAAAAGTTGCAGCCTTTTTCTCTTTTTCTCTGTTTATTTC
. : . : . : . : . : . :
JMFS016F12+ AACCTGTCTTATTGTTTTTTAAGAAAGAAGATGGCAATGGGCTGCGGAGAG
JMFS022F02+ AACCTGTCTTATTGTTTTTTAAGAAAGAAGATGGCAATGGGCTGCGGAGAGAACAAGCAG
JMFS022D05+ AACCTGTCTTATTGTTTTTTAAGAAAGAAGATGGCAATGGGCTGCGGAGAGAACAAGCAG
____________________________________________________________
consensus AACCTGTCTTATTGTTTTTTAAGAAAGAAGATGGCAATGGGCTGCGGAGAGAACAAGCAG