| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020G15 | Sequence | 580 | 004771 (7) | ref|XP_006358489.1| | 6e-48 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | 739 | 012442 (5) | emb|CAF18445.1| | 4e-62 | endo-1,4-beta-D-glucanase KORRIGAN [Pisum sativum] |
| JMFF045K21 | Sequence | 631 | 004771 (7) | ref|XP_006358489.1| | 2e-69 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | 555 | 012442 (5) | dbj|BAD95336.1| | 8e-19 | cellulase homolog OR16pep precursor [Arabidopsis thaliana] |
| JMFS020H12 | Sequence | 609 | 004771 (7) | ref|XP_006858422.1| | 1e-39 | hypothetical protein AMTR_s00071p00064260 [Amborella trichopoda] gb|ERN19889.1| | |||||
| JMFS024F08 | Sequence | 611 | 004771 (7) | ref|XP_006358489.1| | 1e-48 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | |||||
| JMFS034D11 | Sequence | 626 | 004771 (7) | ref|NP_001233943.1| | 2e-61 | endo-1,4-beta-glucanase [Solanum lycopersicum] gb|AAC49704.1| endo-1,4-beta-gluc | |||||
| JMSF015P22 | Sequence | 278 | 004771 (7) | 646 | 012442 (5) | ref|XP_004171003.1| | 7e-49 | PREDICTED: LOW QUALITY PROTEIN: endoglucanase 25-like [Cucumis sativus] | |||
| JMSF021A23 | Sequence | 636 | 004771 (7) | ref|XP_006358489.1| | 2e-67 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | 532 | 012442 (5) | ref|XP_011088109.1| | 2e-54 | PREDICTED: endoglucanase 25-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF021A23+ C
____________________________________________________________
consensus C
. : . : . : . : . : . :
JMFF045K21+ GAATTACCCCTCCATGA
JMSF021A23+ TTTAAACATCGTTGCATCATCCGACTTGCCATCTTGCAACCCGGAATTACCCCTCCATGA
JMFS034D11+ GAATTACCCCTCCATGA
____________________________________________________________
consensus TTTAAACATCGTTGCATCATCCGACTTGCCATCTTGCAACCCGGAATTACCCCTCCATGA
. : . : . : . : . : . :
JMFF045K21+ TACATTATTGTGCTTGGGTAGTTTTCCAGAACGCTGAGCATTGAAGAACATGAGGGCCTT
JMSF021A23+ TACATTATTGTGCTTGGGTAGTTTTCCAGAACGCTGAGCATTGAAGAACATGAGGGCCTT
JMFS034D11+ TACATTATTGTGCTTGGGTAGTTTTCCAGAACGCTGAGCATTGAAGAACATGAGGGCCTT
JMFF020G15+ TGAGCATTGAAGAACATGAGGGCCTT
____________________________________________________________
consensus TACATTATTGTGCTTGGGTAGTTTTCCAGAACGCTGAGCATTGAAGAACATGAGGGCCTT
. : . : . : . : . : . :
JMFF045K21+ GTGAAGAGCGAGGGTGTAGTTATCCGGCGGCGGGTCGTGAGGGTGGTGGCGCGGCACAAG
JMSF021A23+ GTGAAGAGCGAGGGTGTAGTTATCCGGCGGCGGGTCGTGAGGGTGGTGGCGCGGCACAAG
JMFS034D11+ GTGAAGAGCGAGGGTGTAGTTATCCGGCGGCGGGTCGTGAGGGTGGTGGCGCGGCACAAG
JMFF020G15+ GTGAAGAGCGAGGGTGTAGTTATCCGGCGGCGGGTCGTGAGGGTGGTGGCGCGGCACAAG
JMFS024F08+ AAG
____________________________________________________________
consensus GTGAAGAGCGAGGGTGTAGTTATCCGGCGGCGGGTCGTGAGGGTGGTGGCGCGGCACAAG
. : . : . : . : . : . :
JMFF045K21+ CTTGACGATCATGGTGATGAAGGCGGCCAAAAGGGCGGCGGTAATGATGCACCCAACAGT
JMSF021A23+ CTTGACGATCATGGTGATGAAGGCGGCCAAAAGGGCGGCGGTAATGATGCACCCAACAGT
JMFS034D11+ CTTGACGATCATGGTGATGAAGGCGGCCAAAAGGGCGGCGGTAATGATGCACCCAACAGT
JMFF020G15+ CTTGACGATCATGGTGATGAAGGCGGCCAAAAGGGCGGCGGTAATGATGCACCCAACAGT
JMFS024F08+ CTTGACGATCATGGTGATGAAGNCGGCCAAAAGGGCGGCGGTAATGATGCACCCAACAGT
JMFS020H12+ CCCAACAGT
____________________________________________________________
consensus CTTGACGATCATGGTGATGAAGGCGGCCAAAAGGGCGGCGGTAATGATGCACCCAACAGT
. : . : . : . : . : . :
JMFF045K21+ CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
JMSF021A23+ CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
JMFS034D11+ CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
JMFF020G15+ CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
JMFS024F08+ CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
JMFS020H12+ CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
____________________________________________________________
consensus CCACTTGAACACCTTCCGGCTCACAATTATGCACCCCAGATCCACGTACTTCTTCTTCTT
. : . : . : . : . : . :
JMFF045K21+ CTGCTCCGTCGGCCCCAGCAGCCAGCTCTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
JMSF021A23+ CTGNTCCGTCGGCCCCAGCAGCCAGCTNTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
JMFS034D11+ CTGCTCCGTCGGCCCCAGCAGCCAGCTCTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
JMFF020G15+ CTGCTCCGTCGGCCCCAGCAGCCAGCTCTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
JMFS024F08+ CTGCTCCGTCGGCCCCAGCAGCCAGCTCTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
JMFS020H12+ CTGCTCCGTCGGCCCCAGCAGCCAGCTCTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
____________________________________________________________
consensus CTGCTCCGTCGGCCCCAGCAGCCAGCTCTGCTGCGTCTCGTCCAGCGACCGCGACAGCGC
. : . : . : . : . : . :
JMFF045K21+ CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTCGTCATCGGTGGCCGAGTCGGCGTT
JMSF021A23+ CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTNGTCATCGGTGGCCGAGTCGGCGTT
JMFS034D11+ CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTCGTCATCGGTGGCCGAGTCGGCGTT
JMFF020G15+ CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTCGTCATCGGTGGCCGAGTCGGCGTT
JMSF015P22+ TCATCGGTGGCCGAGTCGGCGTT
JMFS024F08+ CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTCGTCATCGGTGGCCGAGTCGGCGTT
JMFS020H12+ CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTCGTCATCGGTGGCCGAGTCGGCGTT
____________________________________________________________
consensus CGCCCGGTCCAGCTCGTGCAAATTCCGGCTCCGCTCGTCATCGGTGGCCGAGTCGGCGTT
. : . : . : . : . : . :
JMFF045K21+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
JMSF021A23+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
JMFS034D11+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
JMFF020G15+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
JMSF015P22+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
JMFS024F08+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
JMFS020H12+ GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
____________________________________________________________
consensus GATCTCCAACGGCCCACCCCACGGATCTCTGCCGTACATTTCTGGGTATTCGATTTCCGC
. : . : . : . : . : . :
JMFF045K21+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
JMSF021A23+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
JMFS034D11+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
JMFF020G15+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
JMSF015P22+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
JMFS024F08+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
JMFS020H12+ CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
____________________________________________________________
consensus CCCCTATACCACGCGCAATTCCGATAAAGAATGCGAAATGCGGATCTGGGTACCGGAGAT
. : . : . : . : . : . :
JMFF045K21+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
JMSF021A23+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
JMFS034D11+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
JMFF020G15+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
JMSF015P22+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
JMFS024F08+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
JMFS020H12+ CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
____________________________________________________________
consensus CCGCAAGTCTCGATGCTAAATTTCTGAGCTTTCTTTCTGCAACCAAGACTGTTCAGGACT
. : . : . : . : . : . :
JMFF045K21+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGT
JMSF021A23+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGT
JMFS034D11+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGTGAGAAGAAGAAGAAGTGAAGAAGCGA
JMFF020G15+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGTGAGAAGAAGAAGAAGTGAAGAAGCGA
JMSF015P22+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGTGAGAAGAAGAAGAAGTGAAGAAGCGA
JMFS024F08+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGTGAGAAGAAGAAGAAGTGAAGAAGCGA
JMFS020H12+ AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGTGAGAAGAAGAAGAAGTGAAGAAGCGA
____________________________________________________________
consensus AGAGGAGAAAGAGGGAAGGGGTGGTGGGTGAGGTGAGAAGAAGAAGAAGTGAAGAAGCGA
. : . : . : . : . : . :
JMFF020G15+ GCTTATATGGCAAT
JMSF015P22+ GCTTATATGGCAAT
JMFS024F08+ GCTTATATGGCAATAATGGGTTTGAGCTGTAATGCTGCTGTTTATATTTTTAAAAATTCT
JMFS020H12+ GCTTATATGGCAATAATGGGTTTGAGCTGTAATGCTGCTGTTTATATTTTTAAAAATTCT
____________________________________________________________
consensus GCTTATATGGCAATAATGGGTTTGAGCTGTAATGCTGCTGTTTATATTTTTAAAAATTCT
. : . : . : . : . : . :
JMFS024F08+ CATTTTTTTTATAAGTATTTTGTTGTTCTAATGTCTTGTCTGGTTGGAAGAAAAATATGC
JMFS020H12+ CATTTTTTTTATAAGTATTTTGTTGTTCTAATGTCTTGTCTGGTTGGAAGAAAAATATGC
____________________________________________________________
consensus CATTTTTTTTATAAGTATTTTGTTGTTCTAATGTCTTGTCTGGTTGGAAGAAAAATATGC
. : . : . : . : . : . :
JMFS024F08+ AATTTGTT
JMFS020H12+ AATTTGTTGTGGAGATTGGGACTTCTGCACTGACAGAAAATGACAGTCTGTCTAATTCCG
____________________________________________________________
consensus AATTTGTTGTGGAGATTGGGACTTCTGCACTGACAGAAAATGACAGTCTGTCTAATTCCG