Contig 004770:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS013C01Sequence574004770 (2)ref|XP_009760273.1|3e-75PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Nicotiana
JMFS018H12Sequence621004770 (2)ref|XP_004230817.1|4e-86PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Solanum ly

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS018H12+ AATGCATTTAGGAAAGTGTGC
                      ____________________________________________________________
consensus AATGCATTTAGGAAAGTGTGC
 
. : . : . : . : . : . :
JMFS013C01+ TTTTAGGGNATACTGTCTTGAACCACAC
JMFS018H12+ AAGCTTCCCTTCAATAGTTCAACAAAAGGTTCTTTTAGGGGATACTTTCTTGAACCACAC
                      ____________________________________________________________
consensus AAGCTTCCCTTCAATAGTTCAACAAAAGGTTCTTTTAGGGGATACTTTCTTGAACCACAC
 
. : . : . : . : . : . :
JMFS013C01+ AATACACTGTGTTCCAATATGTGAGGAATTCCAGTTGAATCTTTCGGAGTAGTTCGGAAA
JMFS018H12+ AATACACTGTGTTCCAATATGTGAGGAATTCCAGTTGAATCTTTCGGAGGAGTTCGGAAA
                      ____________________________________________________________
consensus AATACACTGTGTTCCAATATGTGAGGAATTCCAGTTGAATCTTTCGGAGTAGTTCGGAAA
 
. : . : . : . : . : . :
JMFS013C01+ ACAATACCAAAGACCTTATTCTCATCGTCATTGCAAACCGACATAATTTCGGCTCCGGTC
JMFS018H12+ ACAATACCAAAGACCTTATTCTCATCGTCATTGCAAACCGACATAATTTCGGCTCCGGTC
                      ____________________________________________________________
consensus ACAATACCAAAGACCTTATTCTCATCGTCATTGCAAACCGACATAATTTCGGCTCCGGTC
 
. : . : . : . : . : . :
JMFS013C01+ TTCTTGTGCTTATATAAAACAGCTTTGGATTTACACTCATCAATGAACTGCTCAGACACT
JMFS018H12+ TTCTTGTGCTTATATAAAACAGCTTTGGATTTACACTCATCAATGAACTGCTCAGACACT
                      ____________________________________________________________
consensus TTCTTGTGCTTATATAAAACAGCTTTGGATTTACACTCATCAATGAACTGCTCAGACACT
 
. : . : . : . : . : . :
JMFS013C01+ TTCTCGAACCCCAGCTTCTCGGCGACTTCATCATCAGCTCCAATAC---CTGGAGAGAGC
JMFS018H12+ TTCTCGAACCCCAGCTTCTCGGCGACTTCATCATCAGCTCCAATACCTTCTGGAGAGAGC
                      ____________________________________________________________
consensus TTCTCGAACCCCAGCTTCTCGGCGACTTCATCATCAGCTCCAATACCTTCTGGAGAGAGC
 
. : . : . : . : . : . :
JMFS013C01+ TGCGGGGAGGGAGTGGCAACAGCTCGGACGGAGAGAGAGGAAAAGTGCCTTCTCACGTGA
JMFS018H12+ TGCGGGGAGGGAGTGGCAACAGCTCGGACGGAGAGAGAGGAAAAGTGCCTTCTCACGTGA
                      ____________________________________________________________
consensus TGCGGGGAGGGAGTGGCAACAGCTCGGACGGAGAGAGAGGAAAAGTGCCTTCTCACGTGA
 
. : . : . : . : . : . :
JMFS013C01+ AAAGCAGGGGAAGCGGCGGTGGAGGTGAGACGGAGGTGGTTGTCGAAGAGCGTGGAGCGG
JMFS018H12+ AAAGCAGGGGAAGCGGCGGTGGAGGTGAGACGGAGGTGGTTGTCGAAGAGCGTGGAGCGG
                      ____________________________________________________________
consensus AAAGCAGGGGAAGCGGCGGTGGAGGTGAGACGGAGGTGGTTGTCGAAGAGCGTGGAGCGG
 
. : . : . : . : . : . :
JMFS013C01+ CGACAGCGCTGGACGTTGTGGAGCAGACGGTGGCGCTTGGCGGAGATAGATGTAAATCGA
JMFS018H12+ CGACAGCGCTGGACGTTGTGGAGCAGACGGTGGCGCTTGGCGGAGATAGATGTAAATCGA
                      ____________________________________________________________
consensus CGACAGCGCTGGACGTTGTGGAGCAGACGGTGGCGCTTGGCGGAGATAGATGTAAATCGA
 
. : . : . : . : . : . :
JMFS013C01+ GCTAGTCCGTGGTAAGGGCGAGCGAAGATTCTAGAACAGGCGAGTGGTGTAGTAGATGAA
JMFS018H12+ GCTAGTCCGTGGTAAGGGCGAGCGAAGATTCTAGAACAGGCGAGTGGTGTAGTAGATGAA
                      ____________________________________________________________
consensus GCTAGTCCGTGGTAAGGGCGAGCGAAGATTCTAGAACAGGCGAGTGGTGTAGTAGATGAA
 
. : . : . : . : . : . :
JMFS013C01+ AGAGAGCGCAGCAGAACCGCCTTCTCCATGGTAGAAGAAGT
JMFS018H12+ AGAGAGCGCAGCAGAACCGCCTTCTCCATGGTAGAAGAAGTAGACGGAAATGAACGAGAT
                      ____________________________________________________________
consensus AGAGAGCGCAGCAGAACCGCCTTCTCCATGGTAGAAGAAGTAGACGGAAATGAACGAGAT