Contig 004767:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS014E01Sequence594004767 (4)ref|XP_011070486.1|2e-27PREDICTED: phytosulfokine receptor 1 [Sesamum indicum]
JMFS016A12Sequence627004767 (4)sp|Q8LPB4.1|PSKR1_DAUCA1e-22RecName: Full=Phytosulfokine receptor 1; Short=DcPSKR1; AltName: Full=Phytosulf
JMFS016E09Sequence627004767 (4)sp|Q8LPB4.1|PSKR1_DAUCA7e-15RecName: Full=Phytosulfokine receptor 1; Short=DcPSKR1; AltName: Full=Phytosulf
JMSF019I20Sequence428004767 (4)sp|Q8LPB4.1|PSKR1_DAUCA4e-13RecName: Full=Phytosulfokine receptor 1; Short=DcPSKR1; AltName: Full=Phytosulf769016084ref|XP_009604086.1|3e-101PREDICTED: phytosulfokine receptor 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS014E01+                                                                    AAG
                      ____________________________________________________________
consensus                                                                      AAG
 
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JMFS014E01+           CTGCTCCAAATTGCCTATAGATTCTGAAACTTTCCCATTAAGCCTCCTTTTCCCAAGGTC
JMFS016A12+                                       ACTTTCCCATTAAGCCTCCTTTTCCCAAGGTC
                      ____________________________________________________________
consensus             CTGCTCCAAATTGCCTATAGATTCTGAAACTTTCCCATTAAGCCTCCTTTTCCCAAGGTC
 
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JMFS014E01+           CAATTTGATCACCCTTCCATAGTTTGAGGGCTCATTTAATCCAAGAGATAAAGAAGACTG
JMFS016A12+           CAATTTGATCACCCTTCCATAGTTTGAGGGCTCATTTAATCCAAGAGATAAAGAAGACTG
JMSF019I20+                                                 ATCCAAGAGATAAAGAAGACTG
JMFS016E09+                                                 ATCCAAGAGATAAAGAAGACTG
                      ____________________________________________________________
consensus             CAATTTGATCACCCTTCCATAGTTTGAGGGCTCATTTAATCCAAGAGATAAAGAAGACTG
 
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JMFS014E01+           GCAAGTTATCCCAACCCAGTTGCAGCAATTGGGAGAAGAAGAAGAAGAAGAATTTCTCTC
JMFS016A12+           GCAAGTTATCCCAACCCAGTTGCAGCAATTGGGAGAAGAAGAAGAAGAAGAATTTCTCTC
JMSF019I20+           GCAAGTTATCCCAACCCAGTTGCAGCAATTGGGAGAAGAAGAAGAAGAAGAATTTCTCTC
JMFS016E09+           GCAAGTTATCCCAACCCAGTTGCAGCAATTGGGAGAAGAAGAAGAAGAAGAATTTCTCTC
                      ____________________________________________________________
consensus             GCAAGTTATCCCAACCCAGTTGCAGCAATTGGGAGAAGAAGAAGAAGAAGAATTTCTCTC
 
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JMFS014E01+           CCAGCCATCAACACCAGACTCCAGTAAATCCAAGAACCCCTCCAGAGCTCTCAAATCCAC
JMFS016A12+           CCAGCCATCAACACCAGACTCCAGTAAATCCAAGAACCCCTCCAGAGCTCTCAAATCCAC
JMSF019I20+           CTAGCCATCAACACCAGACTCCAGTAAATCCAAGAACCCCTCCAGAGCTCTCAAATCCAC
JMFS016E09+           CCAGCCATCAACACCAGACTCCAGTAAATCCAAGAACCCCTCCAGAGCTCTCAAATCCAC
                      ____________________________________________________________
consensus             CCAGCCATCAACACCAGACTCCAGTAAATCCAAGAACCCCTCCAGAGCTCTCAAATCCAC
 
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JMFS014E01+           CGGATTACATGTCAGCTTCTGGGGATTCTGGGCCTGAGATTCTGCAGAAACCCCAAGAAG
JMFS016A12+           CGGATTACATGTCAGCTTCTGGGGATTCTGGGCCTGAGATTCTGCAGAAACCCCAAGAAG
JMSF019I20+           CGGATTACATGTCAGCTTCTGGGGATTCTGGGCCTGAGATTCTGCAGAAACCCCAAGAAG
JMFS016E09+           CGGATTACATGTCAGCTTCTGGGGATTCTGGGCCTGAGATTCTGCAGAAACCCCAAGAAG
                      ____________________________________________________________
consensus             CGGATTACATGTCAGCTTCTGGGGATTCTGGGCCTGAGATTCTGCAGAAACCCCAAGAAG
 
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JMFS014E01+           AATGAAAATCACACAAAGTATCACCAAACCCATCTCTTCTTCCCAAAAAAGCTCAAATCT
JMFS016A12+           AATGAAAATCACACAAAGTATCACCAAACCCATCTCTTCTTCCCAAAAAAGCTCAAATCT
JMSF019I20+           AATGAAAATCACACAAAGTATCACCAAACCCATCTCTTCTTCCCAAAAAAGCTCAAATCT
JMFS016E09+           AATGAAAATCACACAAAGTATCACCAAACCCATCTCTTCTTCCCAAAAAAGCTCAAATCT
                      ____________________________________________________________
consensus             AATGAAAATCACACAAAGTATCACCAAACCCATCTCTTCTTCCCAAAAAAGCTCAAATCT
 
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JMFS014E01+           TTTTCACCAAAACTCCTCCTTTCTCAACATTTCGCCCCAAGATCAACTCAAAACACACAA
JMFS016A12+           TTTTCACCAAAACTCCTCCTTTCTCAACATTTCGCCCCAAGATCAACTCAAAACACACAA
JMSF019I20+           TTTTCACCAAAACTCCTCCTTTCTCAACATTTCGCCCCAAGATCAACTCAAAACACACAA
JMFS016E09+           TTTTCACCAAAACTCCTCCTTTCTCAACATTTCGCCCCAAGATCAACTCAAAACACACAA
                      ____________________________________________________________
consensus             TTTTCACCAAAACTCCTCCTTTCTCAACATTTCGCCCCAAGATCAACTCAAAACACACAA
 
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JMFS014E01+           AGAACAGAAGCTTTGGGTAATTTGGCTTCAGCCCGAAGAAGAAGAAGAAGTTAAAAAGGA
JMFS016A12+           AGAACAGAAGCTTTGGGTAATTTGGCTTCAGCCCGAAGAAGAAGAAGAAGTTAAAAAGGA
JMSF019I20+           AGAACAGAAGCTTTGGGTAATTTGGCTTCAGCCCGAAGAAGAAGAAGAAGTTAAAAAGGA
JMFS016E09+           AGAACAGAAGCTTTGGGTAATTTGGCTTCAGCCCGAAGAAGAAGAAGAAGTTAAAAAGGA
                      ____________________________________________________________
consensus             AGAACAGAAGCTTTGGGTAATTTGGCTTCAGCCCGAAGAAGAAGAAGAAGTTAAAAAGGA
 
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JMFS014E01+           AAAAAAGATTGAGGAGAAGCAGGAATGAAGGAAGAGAATTAGAATATTCCCTTCAACCTT
JMFS016A12+           AAAAAAGATTGAGGAGAAGCAGGAATGAAGGAAGAGAATTAGAATATTCCCTTCAACCTT
JMSF019I20+           AAAAAAGATTGAGGAGAAGCAGGAATGAAGGAAGAGAATTAGAA                
JMFS016E09+           AAAAAAGATTGAGGAGAAGCAGGAATGAAGGAAGAGAATTAGAATATTCCCTTCAACCTT
                      ____________________________________________________________
consensus             AAAAAAGATTGAGGAGAAGCAGGAATGAAGGAAGAGAATTAGAATATTCCCTTCAACCTT
 
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JMFS014E01+           CGTTTAATGGTCTAAATAGGAGACGGCTGACGCTGCGTTCTGCTCTCCAAA         
JMFS016A12+           CGTTTAATGGTCTAAATAGGAGACGGCTGACGCTGCGTTCTGCTCTCCAAATTGAAGACT
JMFS016E09+           CGTTTAATGGTCTAAATAGGAGACGGCTGACGCTGCGTTCTGCTCTCCAAATTGAAGACT
                      ____________________________________________________________
consensus             CGTTTAATGGTCTAAATAGGAGACGGCTGACGCTGCGTTCTGCTCTCCAAATTGAAGACT
 
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JMFS016A12+           TTTGT                                                       
JMFS016E09+           TTTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGAACTATGAAGAAGCCGTTG
                      ____________________________________________________________
consensus             TTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGAACTATGAAGAAGCCGTTG
 
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JMFS016E09+           GGAGGGAGAGGTTGAATATCTGTTAAACATAATTAATTTATAAGAACAGTCATCATCTTC
                      ____________________________________________________________
consensus             GGAGGGAGAGGTTGAATATCTGTTAAACATAATTAATTTATAAGAACAGTCATCATCTTC