Contig 004765:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS015E02Sequence536004765 (3)
JMFS097C03Sequence622004765 (3)
JMSF003C09Sequence298004765 (3)445012328 (3)ref|XP_009629742.1|4e-12PREDICTED: BTB/POZ domain-containing protein NPY3-like isoform X1 [Nicotiana to

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS097C03+ GTATGAGCAATGGTATTATTATAGCAAAGGCC
                      ____________________________________________________________
consensus GTATGAGCAATGGTATTATTATAGCAAAGGCC
 
. : . : . : . : . : . :
JMFS097C03+ ACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCTGTGCC
                      ____________________________________________________________
consensus ACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCTGTGCC
 
. : . : . : . : . : . :
JMFS097C03+ TCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGTCTGGG
JMFS015E02+ CAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCNCAATGAAAGTCTGGG
                      ____________________________________________________________
consensus TCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGTCTGGG
 
. : . : . : . : . : . :
JMFS097C03+ ACATCAGAGAGTTTAGTAATGCAAATGGTCCAACCCAAGCTGCAAGGGCCACCACCACAA
JMSF003C09+ CATCAGAGAGTTTAGTAATGCAAATGGTCCAACCCAAGCTGCAAGGGCCACCACCACAA
JMFS015E02+ ACATCAGAGAGTTTAGTAATGCAAATGGTCCAACCCAAGCTGCAAGGGCCACCACCACAA
                      ____________________________________________________________
consensus ACATCAGAGAGTTTAGTAATGCAAATGGTCCAACCCAAGCTGCAAGGGCCACCACCACAA
 
. : . : . : . : . : . :
JMFS097C03+ GAATATGCTATGCTGCTGCTAATACTAGTATCTTTAGGTGATCGAAAAAAGATGATTAGC
JMSF003C09+ GAATATGCTATGCTGCTGCTAATACTAGTATCTTTAGGTGATCGAAAAAAGATGATTAGC
JMFS015E02+ GAATATGCTATGCTGCTGCTAATACTAGTATCTTTAGGTGATCGAAAAAAGATGATTAGC
                      ____________________________________________________________
consensus GAATATGCTATGCTGCTGCTAATACTAGTATCTTTAGGTGATCGAAAAAAGATGATTAGC
 
. : . : . : . : . : . :
JMFS097C03+ CCCAAGCGAGCAAAGAACACACACACGAAAAGAGAAAACCACCCATCAAAAAGATGAGTT
JMSF003C09+ CCCAAGCGAGCAAAGAACACACACACGAAAAGAGAAAACCACCCATCAAAAAGATGAGTT
JMFS015E02+ CCCAAGCGAGCAAAGAACACACACACGAAAAGAGAAAACCACCCATCAAAAAGATGAGTT
                      ____________________________________________________________
consensus CCCAAGCGAGCAAAGAACACACACACGAAAAGAGAAAACCACCCATCAAAAAGATGAGTT
 
. : . : . : . : . : . :
JMFS097C03+ GTCCCTAATCTTTGCCAGCCACCATGGCAACACCATGTTTTCGCAAAAAGCCAAGCGCAG
JMSF003C09+ GTCCCTAATCTTTGCCAGCCACGATGGCAACACCATGTTTTCGCAAAAAGCCAAGCGCAG
JMFS015E02+ GTCCCTAATCTTTGCCAGCCACCATGGCAACACCATGTTTTCGCAAAAAGCCAAGCGCAG
                      ____________________________________________________________
consensus GTCCCTAATCTTTGCCAGCCACCATGGCAACACCATGTTTTCGCAAAAAGCCAAGCGCAG
 
. : . : . : . : . : . :
JMFS097C03+ AATGTTCCCAAAGTCTCTTCTATCTCTTTAGAATCAGCACCACCGCCCCCACCACCACTC
JMSF003C09+ AATGTTCCCAAAGTCTCTTCTATCTCTTTAGAATCAGCACCACCGCCCCCACCACC
JMFS015E02+ AATGTTCCCAAAGTCTCTTCTATCTCTTTAGAATCAGCACCACCGCCCCCACCACCACTC
                      ____________________________________________________________
consensus AATGTTCCCAAAGTCTCTTCTATCTCTTTAGAATCAGCACCACCGCCCCCACCACCACTC
 
. : . : . : . : . : . :
JMFS097C03+ CGCTTTTTTTTCTCCACTCAAATCTTTTTATACTCGGAATCTGAATTCGCAGTACACCCC
JMFS015E02+ CGCTTTTTTTTCTCCACTCAAATCTTTTTATACTCGGAATCTGAATTCGCAGTACACCCC
                      ____________________________________________________________
consensus CGCTTTTTTTTCTCCACTCAAATCTTTTTATACTCGGAATCTGAATTCGCAGTACACCCC
 
. : . : . : . : . : . :
JMFS097C03+ TTCACGAACCCATACAAAATTTAACAAATACTAGCTGTAAATCTGTGGTTTTTTTTTAAT
JMFS015E02+ TTGACGAACCCATACAAAATTTAACAAATACTAGCTGTAAATCTGTGGTTTTTTTTTAAT
                      ____________________________________________________________
consensus TTGACGAACCCATACAAAATTTAACAAATACTAGCTGTAAATCTGTGGTTTTTTTTTAAT
 
. : . : . : . : . : . :
JMFS097C03+ ATTATTTTTCTACTTTTTTTCTTGCGCTGCTGCAACCGGAAAGTGAGTGG
JMFS015E02+ ATTATTTTTCTACTTTTTTTCTTGCGCTGCTGCAACCGGAAAGTGAGTGGCTTGCTTTTT
                      ____________________________________________________________
consensus ATTATTTTTCTACTTTTTTTCTTGCGCTGCTGCAACCGGAAAGTGAGTGGCTTGCTTTTT