clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019H03 | Sequence | 545 | 004760 (8) | dbj|BAE96953.1| | 1e-103 | starch branching enzyme I [Ipomoea batatas] | 715 | 003436 (5) | dbj|BAE96954.1| | 1e-89 | starch branching enzyme I [Ipomoea batatas] |
JMFS013A07 | Sequence | 608 | 004760 (8) | dbj|BAE96953.1| | 2e-86 | starch branching enzyme I [Ipomoea batatas] | |||||
JMFS043F06 | Sequence | 600 | 004760 (8) | dbj|BAE96952.1| | 5e-100 | starch branching enzyme I [Ipomoea batatas] | |||||
JMFS048D07 | Sequence | 470 | 004760 (8) | dbj|BAE96954.1| | 1e-38 | starch branching enzyme I [Ipomoea batatas] | |||||
JMFS078D12 | Sequence | 619 | 004760 (8) | dbj|BAE96952.1| | 7e-139 | starch branching enzyme I [Ipomoea batatas] | |||||
JMFS146F01 | Sequence | 616 | 004760 (8) | dbj|BAE96956.1| | 1e-126 | starch branching enzyme I [Ipomoea batatas] | |||||
JMSF011L01 | Sequence | 433 | 004760 (8) | dbj|BAE96956.1| | 2e-56 | starch branching enzyme I [Ipomoea batatas] | 744 | 003436 (5) | dbj|BAE96953.1| | 3e-89 | starch branching enzyme I [Ipomoea batatas] |
JMSF018D09 | Sequence | 218 | 004760 (8) | dbj|BAE96953.1| | 4e-08 | starch branching enzyme I [Ipomoea batatas] | 796 | 003436 (5) | dbj|BAE96956.1| | 8e-92 | starch branching enzyme I [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMFS078D12+ ATCCAAGCCG
____________________________________________________________
consensus ATCCAAGCCG
. : . : . : . : . : . :
JMFS078D12+ GGATCCTATCAATCCAAACACCACTGTTGTGCTTGAAACGGAACTTAACTCTAGAGTTGT
____________________________________________________________
consensus GGATCCTATCAATCCAAACACCACTGTTGTGCTTGAAACGGAACTTAACTCTAGAGTTGT
. : . : . : . : . : . :
JMFS078D12+ GTGGAATAGCTGGCTTTCCATCACAATCAGGAATTTTTATGCTCCATACACCAAATTGGT
JMFS146F01+ AATCAGGAATTTTTATGCTCCATACACCAAATTGGT
____________________________________________________________
consensus GTGGAATAGCTGGCTTTCCATCACAATCAGGAATTTTTATGCTCCATACACCAAATTGGT
. : . : . : . : . : . :
JMFS078D12+ TCTTCTCCATCTTGTGACTGGACCCATCCCACTCATTGAAATCACCAATAATTTCTGCTT
JMFS146F01+ TCTTCTCCATCTTGTGACTGGACCCATCCCACTCATTGAAATCACCAATAATTTCTGCTT
JMFF019H03+ TTTCTGCTT
____________________________________________________________
consensus TCTTCTCCATCTTGTGACTGGACCCATCCCACTCATTGAAATCACCAATAATTTCTGCTT
. : . : . : . : . : . :
JMFS078D12+ CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS146F01+ CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS048D07+ CTTTGTTAAACCCAA
JMFF019H03+ CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS043F06+ GAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS013A07+ TAAACCCAA
____________________________________________________________
consensus CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
. : . : . : . : . : . :
JMFS078D12+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS146F01+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS048D07+ ATTTCTAATATCTAATAGTAATTTCCTCAAGACCCCCCTCATAATTTCTAAAGAGCTTTT
JMFF019H03+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS043F06+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS013A07+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
____________________________________________________________
consensus ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
. : . : . : . : . : . :
JMFS078D12+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS146F01+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS048D07+ TGTGATCCAAATATCTCTTCATTCTATATTTGAAGTGATCTTTATACTGTTCCAATCCTT
JMFF019H03+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS043F06+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS013A07+ TTTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
____________________________________________________________
consensus TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
. : . : . : . : . : . :
JMFS078D12+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS146F01+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS048D07+ GGTTTAGGCCAAGAAGGTGGATATTCTCAATTTCTTTCTCTACANCCGCCTTTGTTGAAC
JMFF019H03+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS043F06+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMSF011L01+ GTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS013A07+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
____________________________________________________________
consensus GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
. : . : . : . : . : . :
JMFS078D12+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS146F01+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS048D07+ TGTCATCAGTCTATACAGATGAAATANTTGAACTGTGCTCCCCCCATCTGTCATTCCTAA
JMFF019H03+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS043F06+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMSF011L01+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS013A07+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
____________________________________________________________
consensus TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
. : . : . : . : . : . :
JMFS078D12+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS146F01+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS048D07+ GCCTTGANGCTGTAATAGAAAAAACATCCCAGGAGAGC-NTTGAGATTCAAAGATGGCTC
JMFF019H03+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS043F06+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMSF011L01+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS013A07+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
____________________________________________________________
consensus GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
. : . : . : . : . : . :
JMFS078D12+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS146F01+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS048D07+ CAGGAGTGCATGGTGAAGCAAAAGATCTCTTACTTCTAGGAGCCCGCAAGAGANNNNTAG
JMFF019H03+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS043F06+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMSF018D09+ TAGGAGCCCGCAAGAGATTTTTAG
JMSF011L01+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS013A07+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
____________________________________________________________
consensus CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
. : . : . : . : . : . :
JMFS078D12+ TCGGAATGG
JMFS146F01+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMFS048D07+ TCGGAACGGGTATGAAATATCCCACGAGAAGGTGAGGATAGGAGGCCGCAAGAAGT
JMFF019H03+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMFS043F06+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMSF018D09+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMSF011L01+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMFS013A07+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
____________________________________________________________
consensus TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
. : . : . : . : . : . :
JMFS146F01+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACA
JMFF019H03+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACC
JMFS043F06+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
JMSF018D09+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
JMSF011L01+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
JMFS013A07+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
____________________________________________________________
consensus ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
. : . : . : . : . : . :
JMFS043F06+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
JMSF018D09+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
JMSF011L01+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
JMFS013A07+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
____________________________________________________________
consensus CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
. : . : . : . : . : . :
JMFS043F06+ GTGA
JMSF018D09+ GTGACACCTTCATC
JMSF011L01+ GTGACACCTTCATC
JMFS013A07+ GTGACACCTTCATCACTGTACGAAGTAGTATAGAATAGAATAGAATACAAAGCGAAGAAA
____________________________________________________________
consensus GTGACACCTTCATCACTGTACGAAGTAGTATAGAATAGAATAGAATACAAAGCGAAGAAA