Contig 004760:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019H03Sequence545004760 (8)dbj|BAE96953.1|1e-103starch branching enzyme I [Ipomoea batatas]715003436 (5)dbj|BAE96954.1|1e-89starch branching enzyme I [Ipomoea batatas]
JMFS013A07Sequence608004760 (8)dbj|BAE96953.1|2e-86starch branching enzyme I [Ipomoea batatas]
JMFS043F06Sequence600004760 (8)dbj|BAE96952.1|5e-100starch branching enzyme I [Ipomoea batatas]
JMFS048D07Sequence470004760 (8)dbj|BAE96954.1|1e-38starch branching enzyme I [Ipomoea batatas]
JMFS078D12Sequence619004760 (8)dbj|BAE96952.1|7e-139starch branching enzyme I [Ipomoea batatas]
JMFS146F01Sequence616004760 (8)dbj|BAE96956.1|1e-126starch branching enzyme I [Ipomoea batatas]
JMSF011L01Sequence433004760 (8)dbj|BAE96956.1|2e-56starch branching enzyme I [Ipomoea batatas]744003436 (5)dbj|BAE96953.1|3e-89starch branching enzyme I [Ipomoea batatas]
JMSF018D09Sequence218004760 (8)dbj|BAE96953.1|4e-08starch branching enzyme I [Ipomoea batatas]796003436 (5)dbj|BAE96956.1|8e-92starch branching enzyme I [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS078D12+ ATCCAAGCCG
                      ____________________________________________________________
consensus ATCCAAGCCG
 
. : . : . : . : . : . :
JMFS078D12+ GGATCCTATCAATCCAAACACCACTGTTGTGCTTGAAACGGAACTTAACTCTAGAGTTGT
                      ____________________________________________________________
consensus GGATCCTATCAATCCAAACACCACTGTTGTGCTTGAAACGGAACTTAACTCTAGAGTTGT
 
. : . : . : . : . : . :
JMFS078D12+ GTGGAATAGCTGGCTTTCCATCACAATCAGGAATTTTTATGCTCCATACACCAAATTGGT
JMFS146F01+ AATCAGGAATTTTTATGCTCCATACACCAAATTGGT
                      ____________________________________________________________
consensus GTGGAATAGCTGGCTTTCCATCACAATCAGGAATTTTTATGCTCCATACACCAAATTGGT
 
. : . : . : . : . : . :
JMFS078D12+ TCTTCTCCATCTTGTGACTGGACCCATCCCACTCATTGAAATCACCAATAATTTCTGCTT
JMFS146F01+ TCTTCTCCATCTTGTGACTGGACCCATCCCACTCATTGAAATCACCAATAATTTCTGCTT
JMFF019H03+ TTTCTGCTT
                      ____________________________________________________________
consensus TCTTCTCCATCTTGTGACTGGACCCATCCCACTCATTGAAATCACCAATAATTTCTGCTT
 
. : . : . : . : . : . :
JMFS078D12+ CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS146F01+ CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS048D07+ CTTTGTTAAACCCAA
JMFF019H03+ CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS043F06+ GAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
JMFS013A07+ TAAACCCAA
                      ____________________________________________________________
consensus CCTGAGCAGCAGGGGCCCATTCCTGATAGACAATGCAGCCTTCTTCTTTGTTAAACCCAA
 
. : . : . : . : . : . :
JMFS078D12+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS146F01+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS048D07+ ATTTCTAATATCTAATAGTAATTTCCTCAAGACCCCCCTCATAATTTCTAAAGAGCTTTT
JMFF019H03+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS043F06+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
JMFS013A07+ ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
                      ____________________________________________________________
consensus ATTTCAAATAACCTAAAGCAAATTCCTCAAGACCCCCTTCATAATTTTCAAAGAGCTTTT
 
. : . : . : . : . : . :
JMFS078D12+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS146F01+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS048D07+ TGTGATCCAAATATCTCTTCATTCTATATTTGAAGTGATCTTTATACTGTTCCAATCCTT
JMFF019H03+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS043F06+ TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
JMFS013A07+ TTTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
                      ____________________________________________________________
consensus TCTGATCCAAATATCTCTTCATTCTATATCTGAAGTGATCTTTATACGGTTCCAATCCTT
 
. : . : . : . : . : . :
JMFS078D12+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS146F01+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS048D07+ GGTTTAGGCCAAGAAGGTGGATATTCTCAATTTCTTTCTCTACANCCGCCTTTGTTGAAC
JMFF019H03+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS043F06+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMSF011L01+ GTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
JMFS013A07+ GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
                      ____________________________________________________________
consensus GGTCTAGGCCAAGAAGGTGGATATTTTCAATTTCTTTCTCTACATCCGCCATTGTTGAAC
 
. : . : . : . : . : . :
JMFS078D12+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS146F01+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS048D07+ TGTCATCAGTCTATACAGATGAAATANTTGAACTGTGCTCCCCCCATCTGTCATTCCTAA
JMFF019H03+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS043F06+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMSF011L01+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
JMFS013A07+ TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
                      ____________________________________________________________
consensus TGTCATCAGTCAAGACAGATGAAATATTTGAACTGTGCTCCCTCCATCTGTCATTCCTAA
 
. : . : . : . : . : . :
JMFS078D12+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS146F01+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS048D07+ GCCTTGANGCTGTAATAGAAAAAACATCCCAGGAGAGC-NTTGAGATTCAAAGATGGCTC
JMFF019H03+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS043F06+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMSF011L01+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
JMFS013A07+ GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
                      ____________________________________________________________
consensus GCCTTGATGCTGTAATAGAAAAAACATCCCAGGAGAGCTTTTGAGATTCAAAGATGGCAC
 
. : . : . : . : . : . :
JMFS078D12+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS146F01+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS048D07+ CAGGAGTGCATGGTGAAGCAAAAGATCTCTTACTTCTAGGAGCCCGCAAGAGANNNNTAG
JMFF019H03+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS043F06+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMSF018D09+ TAGGAGCCCGCAAGAGATTTTTAG
JMSF011L01+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
JMFS013A07+ CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
                      ____________________________________________________________
consensus CAGTAGTGCATGGTGAAGCAAAAGATCTCTTATTTCTAGGAGCCCGCAAGAGATTTTTAG
 
. : . : . : . : . : . :
JMFS078D12+ TCGGAATGG
JMFS146F01+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMFS048D07+ TCGGAACGGGTATGAAATATCCCACGAGAAGGTGAGGATAGGAGGCCGCAAGAAGT
JMFF019H03+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMFS043F06+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMSF018D09+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMSF011L01+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
JMFS013A07+ TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
                      ____________________________________________________________
consensus TCGGAATGGGTATGAAAGA-CCCACGAGAAGGTGACGATAGGAGGCCGCAAGAAGTTTGC
 
. : . : . : . : . : . :
JMFS146F01+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACA
JMFF019H03+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACC
JMFS043F06+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
JMSF018D09+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
JMSF011L01+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
JMFS013A07+ ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
                      ____________________________________________________________
consensus ATAATATTTGTCGCAATCTGAGCGTATGCAGCAGAATCACAGTCTTCTGAGCTCACCGAG
 
. : . : . : . : . : . :
JMFS043F06+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
JMSF018D09+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
JMSF011L01+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
JMFS013A07+ CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
                      ____________________________________________________________
consensus CAGCAGAGAAGCGAAATGAATTGAATAAATTATGGACATGCGAGAGGAGTCTTGATGAAT
 
. : . : . : . : . : . :
JMFS043F06+ GTGA
JMSF018D09+ GTGACACCTTCATC
JMSF011L01+ GTGACACCTTCATC
JMFS013A07+ GTGACACCTTCATCACTGTACGAAGTAGTATAGAATAGAATAGAATACAAAGCGAAGAAA
                      ____________________________________________________________
consensus GTGACACCTTCATCACTGTACGAAGTAGTATAGAATAGAATAGAATACAAAGCGAAGAAA