Contig 004749:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016G18Sequence621011125 (22)gb|ABK94904.1|3e-135unknown [Populus trichocarpa]726004749 (5)gb|ABK94904.1|2e-83unknown [Populus trichocarpa]
JMFF026P22Sequence576009005 (7)gb|AFQ00710.1|7e-85pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]733004749 (5)gb|ABK94904.1|7e-76unknown [Populus trichocarpa]
JMFF039I07Sequence678004749 (5)gb|ABK94904.1|5e-73unknown [Populus trichocarpa]
JMFN043I20Sequence575004749 (5)ref|XP_010654944.1|6e-41PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Vitis vi
JMSF031H02Sequence650009005 (7)gb|AFQ00710.1|8e-104pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]732004749 (5)gb|ABK94904.1|6e-114unknown [Populus trichocarpa]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031H02+ TCTGCTATGACAATGAAGAGTGTCGGTAAGGCTG
                      ____________________________________________________________
consensus TCTGCTATGACAATGAAGAGTGTCGGTAAGGCTG
 
. : . : . : . : . : . :
rJMSF031H02+ CTCTTAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATCCCCGGCCTCATGGAAG
                      ____________________________________________________________
consensus CTCTTAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATCCCCGGCCTCATGGAAG
 
. : . : . : . : . : . :
rJMSF031H02+ GCACAGCCAAGCCCGACTATGCCACCTGCGTTAAGATCTCCACTGATGCC-TCTATCAAG
rJMFF016G18+ CTGCGTTAAGATCTCCACTGATGCC-TCTATCAAG
rJMFF026P22+ GCGTTAAGATCTCCACTGATGCCTTCTATCAAG
                      ____________________________________________________________
consensus GCACAGCCAAGCCCGACTATGCCACCTGCGTTAAGATCTCCACTGATGCC-TCTATCAAG
 
. : . : . : . : . : . :
rJMSF031H02+ GAGATGATCCCACCCGGTGCTCTTGTCATGCTCACTCCCCTCATTGTCGGGATCTTCTTT
rJMFF016G18+ GAGATGATCCCACCCGGTGCTCTTGTCATGCTCACTCCCCTCATTGTCGGGATCTTCTTT
rJMFF039I07+ AGATGATCCCACCCGGTGCTCTTGTCATGCTCACTCCCCTCATTGTCGGGATCTTCTTT
rJMFF026P22+ GAGATGATCCCACCCGGTGCTCTTGTCATGCTCACTCCCCTCATTGTCGGGATCTTCTTT
                      ____________________________________________________________
consensus GAGATGATCCCACCCGGTGCTCTTGTCATGCTCACTCCCCTCATTGTCGGGATCTTCTTT
 
. : . : . : . : . : . :
rJMSF031H02+ GGCGTGGAAACCTTGTCTGGTGTCCTTGCTGGATCCCTCGTCTCTGGTGTACAGATTGCT
rJMFF016G18+ GGCGTGGAAACCTTGTCTGGTGTCCTTGCTGGATCCCTCGTCTCTGGTGTACAGATTGCT
rJMFF039I07+ GGCGTGGAAACCTTGTCTGGTGTCCTTGCTGGATCCCTCGTCTCTGGTGTACAGATTGCT
rJMFF026P22+ GGCGTGGAAACCTTGTCTGGTGTCCTTGCTGGATCCCTCGTCTCTGGTGTACAGATTGCT
                      ____________________________________________________________
consensus GGCGTGGAAACCTTGTCTGGTGTCCTTGCTGGATCCCTCGTCTCTGGTGTACAGATTGCT
 
. : . : . : . : . : . :
rJMSF031H02+ ATATCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTATATCGAGGCTGGG
rJMFF016G18+ ATATCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTATATCGAGGCTGGG
rJMFF039I07+ ATATCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTATATCGAGGCTGGG
rJMFF026P22+ ATATCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTATATCGAGGCTGGG
JMFN043I20- CCTGGGATAACGCCAAGAAGTATATCGAGGCTGGG
                      ____________________________________________________________
consensus ATATCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTATATCGAGGCTGGG
 
. : . : . : . : . : . :
rJMSF031H02+ GCTTCCGAGCACGCAAGAACTCTTGGTCCAAAAGGATCTGACCCGCACAAGGCTGCTGTG
rJMFF016G18+ GCTTCCGAGCACGCAAGAACTCTTGGTCCAAAAGGATCTGACCCGCACAAGGCTGCTGTG
rJMFF039I07+ GCTTCCGAGCACGCAAGAACTCTTGGTCCAAAAGGATCTGACCCGCACAAGGCTGCTGTG
rJMFF026P22+ GCTTCCGAGCACGCAAGAACTCTTGGTCCAAAAGGATCTGACCCGCACAAGGCTGCTGTG
JMFN043I20- GCTTCCGAGCACGCAAGAACTCTTGGTCCAAAAGGATCTGACCCGCACAAGGCTGCTGTG
                      ____________________________________________________________
consensus GCTTCCGAGCACGCAAGAACTCTTGGTCCAAAAGGATCTGACCCGCACAAGGCTGCTGTG
 
. : . : . : . : . : . :
rJMSF031H02+ ATAGGCGACACTGTGGGTGACCCTCTCAAGGACACATCTGGGCCGTCGTTGAACATTCTT
rJMFF016G18+ ATAGGCGACACTGTGGGTGACCCTCTCAAGGACACATCTGGGCCGTCGTTGAACATTCTT
rJMFF039I07+ ATAGGCGACACTGTGGGTGACCCTCTCAAGGACACATCTGGGCCGTCGTTGAACATTCTT
rJMFF026P22+ ATAGGCGACACTGTGGGTGACCCTCTCAAGGACACATCTGGGCCGTCGTTGAACATTCTT
JMFN043I20- ATAGGCGACACTGTGGGTGACCCTCTCAAGGACACATCTGGGCCGTCGTTGAACATTCTT
                      ____________________________________________________________
consensus ATAGGCGACACTGTGGGTGACCCTCTCAAGGACACATCTGGGCCGTCGTTGAACATTCTT
 
. : . : . : . : . : . :
rJMSF031H02+ ATCAAGCTCATGGCTGTCGAGTCGCTTGTTTTTGCTCCTTTCTTTGCTGCCCATGGCGGT
rJMFF016G18+ ATCAAGCTCATGGCTGTCGAGTCGCTTGTTTTTGCTCCTTTCTTTGCTGCCCATGGCGGT
rJMFF039I07+ ATCAAGCTCATGGCTGTCGAGTCGCTTGTTTTTGCTCCTTTCTTTGCTGCCCATGGCGGT
rJMFF026P22+ ATCAAGCTCATGGCTGTCGAGTCGCTTGTTTTTGCTCCTTTCTTTGCTGCCCATGGCGGT
JMFN043I20- ATCAAGCTCATGGCTGTCGAGTCGCTTGTTTTTGCTCCTTTCTTTGCTGCCCATGGCGGT
                      ____________________________________________________________
consensus ATCAAGCTCATGGCTGTCGAGTCGCTTGTTTTTGCTCCTTTCTTTGCTGCCCATGGCGGT
 
. : . : . : . : . : . :
rJMSF031H02+ CTGCTCTTCAAGATCTTTTAGAAAACATTCTAACTTGTCATCAAAAGTTGCTGAAATTAG
rJMFF016G18+ CTGCTCTTCAAGATCTTTTAGAAAACATTCTAACTTGTCATCAAAAGTTGCTGAAATTAG
rJMFF039I07+ CTGCTCTTCAAGATCTTTTAGAAAACATTCTAACTTGTCATCAAAAGTTGCTGAAATTAG
rJMFF026P22+ CTGCTCTTCAAGATCTTTTAGAAAACATTCTAACTTGTCATCAAAAGTTGCTGAAATTAG
JMFN043I20- CTGCTCTTCAAGATCTTTTAGAAAACATTCTAACTTGTCATCAAAAGTTGCTGAAATTAG
                      ____________________________________________________________
consensus CTGCTCTTCAAGATCTTTTAGAAAACATTCTAACTTGTCATCAAAAGTTGCTGAAATTAG
 
. : . : . : . : . : . :
rJMSF031H02+ TAAAAGTTGAGGTTTGCTCAGAAATTTTCACCTATTCTGGGAGGAGATGACTTTGCGGCG
rJMFF016G18+ TAAAAGTTGAGGTTTGCTCAGAAATTTTCACCTATTCTGGAAGGAGATGACTTTGCGGCG
rJMFF039I07+ TAAAAGTTGAGGTTTGCTCAGAAATTTTCACCTATTCTGGGAGGAGATGACTTTGCGGCG
rJMFF026P22+ TAAAAGTTGAGGTTTGCTCAGAAATTTTCACCTATTCTGGGAGGAGATGACTTTGCGGCG
JMFN043I20- TAAAAGTTGAGGTTTGCTCAGAAATTTTCACCTATTCTGGGAGGAGATGACTTTGCGGCG
                      ____________________________________________________________
consensus TAAAAGTTGAGGTTTGCTCAGAAATTTTCACCTATTCTGGGAGGAGATGACTTTGCGGCG
 
. : . : . : . : . : . :
rJMSF031H02+ GCGCTGCTGATCGTGAAATATTTGGAATAGTTGGGAGATCCTTTTACATGTATCGTTTTC
rJMFF016G18+ GCGCTGCTGATCGTGAAATATTTGGAATAGTTGGGAGATCCTTTTACATGTATCGTTTTC
rJMFF039I07+ GCGCTGCTGATCGTGAAATATTTGGAATAGTTGGGAGATCCTTTTACATGTATCGTTTTC
rJMFF026P22+ GCGCTGCTGATCGTGAAATATTTGGAATAGTTGGGAGATCCTTTTACATGTATCGTTTTC
JMFN043I20- GCGCTGCTGATCGAAAAATATTTGGAATAGTTGGGAGATCCTTTTACATGTATCGTTTTC
                      ____________________________________________________________
consensus GCGCTGCTGATCGTGAAATATTTGGAATAGTTGGGAGATCCTTTTACATGTATCGTTTTC
 
. : . : . : . : . : . :
rJMSF031H02+ CGGCCAACATTTTCTTTTTGGGACCATTATGT
rJMFF016G18+ CGGCCAACATTTTCTTTTTGGGACCATTATGTTAAGAAATTTTGTTGGAATCGGTAACTT
rJMFF039I07+ CGGCCAACATTTTCTTTTTGGGACCATTATGTTAAGAAATTTTGTTGGAATCGGTAACTT
rJMFF026P22+ CGGCCAACATTTTCTTTTTGGGACCATTATGTTAAGAAATTTTGTTGGAATCGGTAACTT
JMFN043I20- CGGCCAACATTTTCTTTTTGGGACCATTATGTTAAGAAATTTTGTTGGAATCGGTAACTT
                      ____________________________________________________________
consensus CGGCCAACATTTTCTTTTTGGGACCATTATGTTAAGAAATTTTGTTGGAATCGGTAACTT
 
. : . : . : . : . : . :
rJMFF016G18+ TTATGGATCTGTGTTAAATTGACCGGTTGAACTGTTTACATTTCTTTTTGCACAATATGA
rJMFF039I07+ TTATGGATCTGTGTTAAATTGACCGGTTGAACTGTTTACATTTCTTTTTGCACAATATGA
rJMFF026P22+ TTATGGATCTGTGTTAAATTGACCGGTTGAACTGTTTACATTTCTTTTTGCACAATATGA
JMFN043I20- TTATGGATCTGTGTTAAATTGACCGGTTGAACTGTTTACATTTCTTTTTGCACAATATGA
                      ____________________________________________________________
consensus TTATGGATCTGTGTTAAATTGACCGGTTGAACTGTTTACATTTCTTTTTGCACAATATGA
 
. : . : . : . : . : . :
rJMFF016G18+ TTGGGTTTAGTGCCAACGTGCCTAATAT
rJMFF039I07+ TTGGGTTTAGTGCCAACGT
rJMFF026P22+ TTGGGTTTAGTGCCAACGTGCCTAATATTGGTTTAATATA
JMFN043I20- TTGGGTTTAGTGCCAACGTGCCTAATATTGGTTTAATATATTCTAAATTCAGTATTTGCC
                      ____________________________________________________________
consensus TTGGGTTTAGTGCCAACGTGCCTAATATTGGTTTAATATATTCTAAATTCAGTATTTGCC