Contig 004748:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005P10Sequence480004748 (3)ref|XP_010033755.1|3e-51PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Eu
JMFN042P14Sequence581004748 (3)gb|EYU24145.1|3e-41hypothetical protein MIMGU_mgv1a018362mg [Erythranthe guttata]
JMFS132C04Sequence626004748 (3)ref|XP_008393427.1|7e-75PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Ma

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN005P10+ CAGGTAGA
                      ____________________________________________________________
consensus CAGGTAGA
 
. : . : . : . : . : . :
JMFN005P10+ CTTTACGTACATACTCATAAAAAGCAAGCCATGGGTGCTTAGCAATGGXXXXXXXXXXXX
                      ____________________________________________________________
consensus CTTTACGTACATACTCATAAAAAGCAAGCCATGGGTGCTTAGCAATGGNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFN005P10+ XXXXXXXXXXXXGCAGTATTGTTAACAAAGTAAATTTTGTTATTCAAGTAGTTGAAGATG
                      ____________________________________________________________
consensus NNNNNNNNNNNNGCAGTATTGTTAACAAAGTAAATTTTGTTATTCAAGTAGTTGAAGATG
 
. : . : . : . : . : . :
JMFN005P10+ AGATGAGATGATAAAACAGGGACATGGTGGCACGATCTCATCGATCTATAAGCCCTTGCA
                      ____________________________________________________________
consensus AGATGAGATGATAAAACAGGGACATGGTGGCACGATCTCATCGATCTATAAGCCCTTGCA
 
. : . : . : . : . : . :
JMFN005P10+ GCCAGGAAGATCGATCCACTGGAGCTGGATTTCGACCTCGCCACGTTCAACGTTTCTCAA
JMFS132C04+ TTTCGACCTCGCCACGTTCAACGTTTCTCAA
                      ____________________________________________________________
consensus GCCAGGAAGATCGATCCACTGGAGCTGGATTTCGACCTCGCCACGTTCAACGTTTCTCAA
 
. : . : . : . : . : . :
JMFN005P10+ CCTCAGACACATATCTTGTATCACCTTGTGGTCTTTCCATGTCACACAGGACTCATCAGC
JMFS132C04+ CCTCAGACACATATCTTGTATCACCTTGTGGTCTTTCCATGTCACACAGGACTCATCAGC
                      ____________________________________________________________
consensus CCTCAGACACATATCTTGTATCACCTTGTGGTCTTTCCATGTCACACAGGACTCATCAGC
 
. : . : . : . : . : . :
JMFN005P10+ TAAACAGTTTGATCTGCCTGGTTGCACTCTTGAAATCACTGTGTCACTTGGGAGGCCCTC
JMFS132C04+ TAAACAGTTTGATCTGCCTGGTTGCACTCTTGAAATCACTGTGTCACTTGGGAGGCCCTC
                      ____________________________________________________________
consensus TAAACAGTTTGATCTGCCTGGTTGCACTCTTGAAATCACTGTGTCACTTGGGAGGCCCTC
 
. : . : . : . : . : . :
JMFN005P10+ TAGATCCATCTTCAAGGCGTCTATAAATGGTTTAATGTTGAATTCTGCATCTCCCATTTT
JMFS132C04+ TAGATCCATCTTCAAGGCGTCTATAAATGGTTTAATGTTGAATTCTGCATCTCCCATTTT
JMFN042P14+ TCTATAAATGGTTTAATGTTGAATTCTGCATCTCCCATTTT
                      ____________________________________________________________
consensus TAGATCCATCTTCAAGGCGTCTATAAATGGTTTAATGTTGAATTCTGCATCTCCCATTTT
 
. : . : . : . : . : . :
JMFN005P10+ GTCATCCTTGGTGAATGTGTCATGATCATACACCGTCAGCTTAATAGAAGCG
JMFS132C04+ GTCATCCTTGGTGAATGTGTCATGATCATACACCGTCAGCTTAATAGAAGCGTCGGGATC
JMFN042P14+ GTCATCCTTGGTGAATGTGTCATGATCATACACCGTCAGCTTAATAGAAGCGTCGGGATC
                      ____________________________________________________________
consensus GTCATCCTTGGTGAATGTGTCATGATCATACACCGTCAGCTTAATAGAAGCGTCGGGATC
 
. : . : . : . : . : . :
JMFS132C04+ TGAAACAGAAAGGGTCAGATCTTCATTCCACTCAGGATTGATATCCTTCCTTATAAAACG
JMFN042P14+ TGAAACAGAAAGGGTCAGATCTTCATTCCACTCAGGATTGATATCCTTCCTTATAAAACG
                      ____________________________________________________________
consensus TGAAACAGAAAGGGTCAGATCTTCATTCCACTCAGGATTGATATCCTTCCTTATAAAACG
 
. : . : . : . : . : . :
JMFS132C04+ AGTCTTCAGCCTCTGTTTGCCCATCTTGACAACAACGTAAGGATCGCTGCTCAGAACATC
JMFN042P14+ AGTCTTCAGCCTCTGTTTGCCCATCTTGACAACAACGTAAGGATCGCTGCTCAGAACATC
                      ____________________________________________________________
consensus AGTCTTCAGCCTCTGTTTGCCCATCTTGACAACAACGTAAGGATCGCTGCTCAGAACATC
 
. : . : . : . : . : . :
JMFS132C04+ GCGGACGGCGAGGTTAATGCCTCGCTTGACACGCACTCTGAGAAGACCCAAGAGGCTGTC
JMFN042P14+ GCGGACGGCGAGGTTAATGCCTCGCTTGACACGCACTCTGAGAAGACCCAAGAGGCTGTC
                      ____________________________________________________________
consensus GCGGACGGCGAGGTTAATGCCTCGCTTGACACGCACTCTGAGAAGACCCAAGAGGCTGTC
 
. : . : . : . : . : . :
JMFS132C04+ CATCAGAGATTGGGTTCCGTCGTCGCTTCCTGACAATGGTATACAATCCATGGCGCACGG
JMFN042P14+ CATCAGAGATTGGGTTCCGTCGTCGCTTCCTGACAATGGTATACAATCCATGGCGCACGG
                      ____________________________________________________________
consensus CATCAGAGATTGGGTTCCGTCGTCGCTTCCTGACAATGGTATACAATCCATGGCGCACGG
 
. : . : . : . : . : . :
JMFS132C04+ CTTATGTTTGGTTT
JMFN042P14+ CTTATGTTTGGTTTTTTTATAAGCTGTCGGGAAAGACAAAACCGACGTGGCCCCAACGTT
                      ____________________________________________________________
consensus CTTATGTTTGGTTTTTTTATAAGCTGTCGGGAAAGACAAAACCGACGTGGCCCCAACGTT
 
. : . : . : . : . : . :
JMFN042P14+ TCCTTATTATTTTTCCTTTTTCGTATTTCTTCGCCAAATATTAATATATTGTGAAGCTTT
                      ____________________________________________________________
consensus TCCTTATTATTTTTCCTTTTTCGTATTTCTTCGCCAAATATTAATATATTGTGAAGCTTT
 
. : . : . : . : . : . :
JMFN042P14+ TCTGATGCTACTCTCCTCTGGAATTGAAAAATAGGATAGGATGACAGAAAACCTCAAGGA
                      ____________________________________________________________
consensus TCTGATGCTACTCTCCTCTGGAATTGAAAAATAGGATAGGATGACAGAAAACCTCAAGGA
 
. : . : . : . : . : . :
JMFN042P14+ GAGTAAATAGAGAAAAGCTTTTGATAGTTTTCTGGAGGAAACAAAGCAAGGCCGCCTGCA
                      ____________________________________________________________
consensus GAGTAAATAGAGAAAAGCTTTTGATAGTTTTCTGGAGGAAACAAAGCAAGGCCGCCTGCA