Contig 004745:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007J04Sequence596004745 (13)ref|XP_010244034.1|2e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMFN013E06Sequence641004745 (13)ref|XP_010244034.1|3e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMFN015N08Sequence635004745 (13)ref|XP_010244034.1|3e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMFN017C19Sequence626004745 (13)ref|XP_010244034.1|2e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMFN028H05Sequence662004745 (13)ref|XP_010244034.1|2e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMFN038J14Sequence618004745 (13)ref|XP_010244034.1|2e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMFN041B10Sequence625004745 (13)ref|XP_010244034.1|2e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMSF012P22Sequence316004745 (13)ref|XP_002529578.1|92.0vacuolar ATP synthase subunit G plant, putative [Ricinus communis] gb|EEF32812.1663004745 (13)ref|XP_010244034.1|3e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMSF014H19Sequence259004745 (13)ref|XP_002529578.1|57.0vacuolar ATP synthase subunit G plant, putative [Ricinus communis] gb|EEF32812.1689004745 (13)ref|XP_010244034.1|4e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]
JMSF040N09Sequence672004745 (13)ref|XP_010244034.1|4e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]685004745 (13)ref|XP_010244034.1|4e-43PREDICTED: V-type proton ATPase subunit G 1-like [Nelumbo nucifera]

Alignment

This contig is upended


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JMFN028H05+                              ATATATATAAATAAGTAATAACNCTCGCATTCTCATCGGGG
rJMSF040N09-                                                    CTCGCATTCTCATCGGGG
JMSF040N09+                                                                  CGGGG
rJMSF014H19-                                                    CTCGCATTCTCATCGGGG
                      ____________________________________________________________
consensus                                ATATATATAAATAAGTAATAACNCTCGCATTCTCATCGGGG
 
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JMFN028H05+           TTTACAACAGTCAATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
rJMSF040N09-          TTTACAACAGTCAATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
JMFN013E06+                AACAGTCAATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
JMFN015N08+                        ATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
JMFN017C19+                              CTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
JMFN038J14+                                      TAATCCAATATGGAAGATAATACAGTTCATATT
JMFN007J04+                                                             AGTTCATATT
JMSF040N09+           TTTACAACAGTCAATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
rJMSF014H19-          TTTACAACAGTCAATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
rJMSF012P22-                         GCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
                      ____________________________________________________________
consensus             TTTACAACAGTCAATGCTACTTGAGGGTAATCCAATATGGAAGATAATACAGTTCATATT
 
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JMFN028H05+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
rJMSF040N09-          GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMFN013E06+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMFN015N08+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMFN017C19+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMFN038J14+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMFN007J04+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMSF040N09+           GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
rJMSF014H19-          GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
rJMSF012P22-          GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
JMFN041B10+                                                          TTATTCAATCAGG
                      ____________________________________________________________
consensus             GCACCTAAATACAGACCCCTGGTACAAAAGCACAGTATTTAACTGCTTTATTCAATCAGG
 
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JMFN028H05+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
rJMSF040N09-          ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMFN013E06+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMFN015N08+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMFN017C19+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMFN038J14+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMFN007J04+           ACCATGAGAANCCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMSF040N09+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
rJMSF014H19-          ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
rJMSF012P22-          ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
JMFN041B10+           ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
                      ____________________________________________________________
consensus             ACCATGAGAAACCAATAGAGATGATAAAAATACAAAATAAGTTGAGAGTTGGCCAAACCC
 
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JMFN028H05+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
rJMSF040N09-          CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMFN013E06+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMFN015N08+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMFN017C19+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMFN038J14+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMFN007J04+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMSF040N09+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
rJMSF014H19-          CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
rJMSF012P22-          CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
JMFN041B10+           CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
                      ____________________________________________________________
consensus             CAGACTCCAAACAGAAGAAAGGAAATGGCTAAGAGAATACTCAGCTTCACACTCATCCAA
 
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JMFN028H05+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
rJMSF040N09-          CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMFN013E06+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMFN015N08+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMFN017C19+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMFN038J14+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMFN007J04+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMSF040N09+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
rJMSF014H19-          CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
rJMSF012P22-          CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
JMFN041B10+           CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
                      ____________________________________________________________
consensus             CACAGATCTTAGTTCTTCACTGTGGTAACATGCCTTAGAAGCATGTGGGCAACATCATGA
 
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JMFN028H05+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
rJMSF040N09-          GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMFN013E06+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMFN015N08+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMFN017C19+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMFN038J14+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMFN007J04+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMSF040N09+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
rJMSF014H19-          GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
rJMSF012P22-          GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
JMSF012P22+                                                                   TAGT
JMFN041B10+           GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
                      ____________________________________________________________
consensus             GAAATTCTTGCAGCTTCTGTCTTCAAATGATCAATCTTGGCTTCGGTCTCTGCCTCTAGT
 
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JMFN028H05+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
rJMSF040N09-          CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMFN013E06+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMFN015N08+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMFN017C19+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMFN038J14+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMFN007J04+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMSF040N09+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
rJMSF014H19-          CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
rJMSF012P22-          CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMSF012P22+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
JMFN041B10+           CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
                      ____________________________________________________________
consensus             CGCTTGACATTAGCACCTGAGTCACCACTACTCTGTGCAAGCTTTTTCTGATACTCAGCT
 
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JMFN028H05+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
rJMSF040N09-          TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMFN013E06+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMFN015N08+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMFN017C19+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMFN038J14+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMFN007J04+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMSF040N09+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
rJMSF014H19-          TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
rJMSF012P22-          TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMSF014H19+            CCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMSF012P22+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
JMFN041B10+           TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
                      ____________________________________________________________
consensus             TCCATATGGGCACGAAAAGCAGCTATCTCCTTCTCAGCTTCTTCTTTTGCCTGTTTCAAT
 
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JMFN028H05+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
rJMSF040N09-          CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMFN013E06+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMFN015N08+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMFN017C19+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMFN038J14+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMFN007J04+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMSF040N09+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
rJMSF014H19-          CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
rJMSF012P22-          CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMSF014H19+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMSF012P22+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
JMFN041B10+           CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
                      ____________________________________________________________
consensus             CTAGCCTGTTTTGCACTCTTTGCAGCATTGACAATGTGCTGTGCTTCTTGCTCAGCAGCT
 
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JMFN028H05+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
rJMSF040N09-          AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMFN013E06+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMFN015N08+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMFN017C19+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMFN038J14+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMFN007J04+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMSF040N09+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
rJMSF014H19-          AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
rJMSF012P22-          AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMSF014H19+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMSF012P22+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
JMFN041B10+           AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
                      ____________________________________________________________
consensus             AAGAGAAGTTGAATTCCACCTTGGCCCCTGTTAGAGTCCATACTGGAAAAGATTTTTGTA
 
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JMFN028H05+           GCT                                                         
rJMSF040N09-          GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
JMFN013E06+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAAC              
JMFN015N08+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTG            
JMFN017C19+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAA               
JMFN038J14+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAA               
JMFN007J04+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAAC              
JMSF040N09+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
rJMSF014H19-          GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
rJMSF012P22-          GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
JMSF014H19+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
JMSF012P22+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
JMFN041B10+           GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
                      ____________________________________________________________
consensus             GCTGAAGAATAGGAGTTTGCTCGTGAATGGATTCACCGAAGAAAACTGACCCCAACTTTC
 
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rJMSF040N09-          AACTAC                                                      
JMSF040N09+           AACTAC                                                      
rJMSF014H19-          AACTACAAA                                                   
rJMSF012P22-          AACTACAAA                                                   
JMSF014H19+           AACTACAAA                                                   
JMSF012P22+           AACTACAAA                                                   
JMFN041B10+           AACTACAAACGAAACTGTTTCGACCTTTTTGAGACTTATATAACCACTGCCTCTGCTGAA
                      ____________________________________________________________
consensus             AACTACAAACGAAACTGTTTCGACCTTTTTGAGACTTATATAACCACTGCCTCTGCTGAA