Contig 004742:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017I23+                 CTGCTGCTACANCCTTATTCCACAAAGTCCAGAAGGGTATACCTCCTTGGGTT
                      ____________________________________________________________
consensus                    CTGCTGCTACANCCTTATTCCACAAAGTCCAGAAGGGTATACCTCCTTGGGTT
 
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rJMSF017I23+          CCTCTCAAGGGGCAAGAGGAAAAGACCTATAATCAGCTCCAACAAGAAGCTTATGAGAGC
rJMFF026J09+                                                    CAAGAAGCTTATGAGAGC
                      ____________________________________________________________
consensus             CCTCTCAAGGGGCAAGAGGAAAAGACCTATAATCAGCTCCAACAAGAAGCTTATGAGAGC
 
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rJMSF017I23+          AAGAAGCGTGACTTGGCTGTTCTGGAAGCAAATGGCGGTGTGTGGCCTGGCGTAAGAACT
rJMFF026J09+          AAGAAGCGTGACTTGGCTGTTCTGGAAGCAAATGGCGGTGTGTGGCCTGGCGTAAGAACT
                      ____________________________________________________________
consensus             AAGAAGCGTGACTTGGCTGTTCTGGAAGCAAATGGCGGTGTGTGGCCTGGCGTAAGAACT
 
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rJMSF017I23+          CCAAGTCATGCTCTGTTTCTCTGGGCCAGTGGATCTGAGCTGACATCAATTTTGGATGAG
rJMFF026J09+          CCAAGTCATGCTCTGTTTCTCTGGGCCAGTGGATCTGAGCTGACATCAATTTTGGATGAG
                      ____________________________________________________________
consensus             CCAAGTCATGCTCTGTTTCTCTGGGCCAGTGGATCTGAGCTGACATCAATTTTGGATGAG
 
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rJMSF017I23+          GATCACATGCCTAACAAATACATTCCAAAAGATCTCAGGATTCAATTGGCTAAGATAATC
rJMFF026J09+          GATCACATGCCTAACAAATACATTCCAAAAGATCTCAGGATTCAATTGGCTAAGATAATC
                      ____________________________________________________________
consensus             GATCACATGCCTAACAAATACATTCCAAAAGATCTCAGGATTCAATTGGCTAAGATAATC
 
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rJMSF017I23+          CCTGGGCTACGGCCATGGGAGGTTCTGAGTGTTGAACAAGCAATGGATCAATTAACATTT
rJMFF026J09+          CCTGGGCTACGGCCATGGGAGGTTCTGAGTGTTGAACAAGCAATGGATCAATTAACATTT
                      ____________________________________________________________
consensus             CCTGGGCTACGGCCATGGGAGGTTCTGAGTGTTGAACAAGCAATGGATCAATTAACATTT
 
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rJMSF017I23+          GGACGTGATTGGTATCGTGAACCCCTTGGTTCATACACAACAGGCCCTCCTTACATTTAT
rJMFF026J09+          GGACGTGATTGGTATCGTGAACCCCTTGGTTCATACACAACAGGCCCTCCTTACATTTAT
                      ____________________________________________________________
consensus             GGACGTGATTGGTATCGTGAACCCCTTGGTTCATACACAACAGGCCCTCCTTACATTTAT
 
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rJMSF017I23+          GATTGGAATAGGGATATCTGGGCCTTGGCGGGCCACTACAATGACTTCTGGGTAAAAATG
rJMFF026J09+          GATTGGAATAGGGATATCTGGGCCTTGGCGGGCCACTACAATGACTTCTGGGTAAAAATG
JMFN038P24-                             TGGGCCTTGGCGGGCCACTACAATGACTTCTGGGTAAAAATG
                      ____________________________________________________________
consensus             GATTGGAATAGGGATATCTGGGCCTTGGCGGGCCACTACAATGACTTCTGGGTAAAAATG
 
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rJMSF017I23+          CGTAGCATACTAATGCGTGGCATCCCCGGTTTTGGCGCTGTGTTGGATATAATTGCAGCT
rJMFF026J09+          CGTAGCATACTAATGCGTGGCATCCCCGGTTTTGGCGCTGTGTTGGATATAATTGCAGCT
JMFN038P24-           CGTAGCATACTAATGCGTGGCATCCCCGGTTTTGGCGCTGTGTTGGATATAATTGCAGCT
                      ____________________________________________________________
consensus             CGTAGCATACTAATGCGTGGCATCCCCGGTTTTGGCGCTGTGTTGGATATAATTGCAGCT
 
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rJMSF017I23+          TATAACGCCGCCAGATTGAAGAGGAGAATGAGGATCAAGGAAGCGAAGAAGAATGCCGAG
rJMFF026J09+          TATAACGCCGCCAGATTGAAGAGGAGAATGAGGATCAAGGAAGCGAAGAAGAATGCCGAG
JMFN038P24-           TATAACGCCGCCAGATTGAAGAGGAGAATGAGGATCAAGGAAGCGAAGAAGAATGCCGAG
                      ____________________________________________________________
consensus             TATAACGCCGCCAGATTGAAGAGGAGAATGAGGATCAAGGAAGCGAAGAAGAATGCCGAG
 
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rJMSF017I23+          CTGGAAAGGAAGTACCTTGGTCATCGTCGTGGTGAAAAGTGATCAGCGATGTTTGATCGG
rJMFF026J09+          CTGGAAAGGAAGTACCTTGGTCATCGTCGTGGTGAAAAGTGATCAGCGATGTTTGATCGG
JMFN038P24-           CTGGAAAGGAAGTACCTTGGTCATCGTCGTGGTGAAAAGTGATCAGCGATGTTTGATCGG
                      ____________________________________________________________
consensus             CTGGAAAGGAAGTACCTTGGTCATCGTCGTGGTGAAAAGTGATCAGCGATGTTTGATCGG
 
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rJMSF017I23+          ATCGGCTTGCAGACAGTAAAATACTAGAAAAGATTGTTGCCAAGATTCTGCTGTGGCAAA
rJMFF026J09+          ATCGGCTTGCAGACAGTAAAATACTAGAAAAGATTGTTGCCAAGATTCTGCTGTGGCAAA
JMFN038P24-           ATCGGCTTGCAGACAGTAAAATACTAGAAAAGATTGTTGCCAAGATTCTGCTGTGGCAAA
                      ____________________________________________________________
consensus             ATCGGCTTGCAGACAGTAAAATACTAGAAAAGATTGTTGCCAAGATTCTGCTGTGGCAAA
 
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rJMSF017I23+          AGCATTCATTAGCTTGCTGCTTCTCCATGACCTATAAACTCGACGCTGCATAATAGCATA
rJMFF026J09+          AGCATTCATTAGCTTGCTGCTTCTCCATGACCTATAAACTCGACGCTGCATAATAGCATA
JMFN038P24-           AGCATTCATTAGCTTGCTGCTTCTCCATGACCTATAAACTCGACGCTGCATAATAGCATA
                      ____________________________________________________________
consensus             AGCATTCATTAGCTTGCTGCTTCTCCATGACCTATAAACTCGACGCTGCATAATAGCATA
 
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rJMSF017I23+          TA                                                          
rJMFF026J09+          TATATGATTTCTGATACTTACAATTATCCAAAGGGTTTTCACTTGTGTCATTTTTGGCCG
JMFN038P24-           TATATGATTTCTGATACTTACAATTATCCAAAGGGTTTTCACTTGTGTCATTTTTGGCCG
                      ____________________________________________________________
consensus             TATATGATTTCTGATACTTACAATTATCCAAAGGGTTTTCACTTGTGTCATTTTTGGCCG
 
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rJMFF026J09+          TCTATTCACAACCTAAAACCTTTGATTTTTACGGCAAT                      
JMFN038P24-           TCTATTCACAACCTAAAACCTTTGATTTTTACGGCAATGGAAACTTGAAACAACTTTTTT
                      ____________________________________________________________
consensus             TCTATTCACAACCTAAAACCTTTGATTTTTACGGCAATGGAAACTTGAAACAACTTTTTT