Contig 004741:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF034O12-                                                               CACATTCT
rJMFF034O12+                                                      ATTCACTCCACATTCT
                      ____________________________________________________________
consensus                                                         ATTCACTCCACATTCT
 
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JMFF034O12-           GACGGAAGACTTTCTCAACGCTATCCAACTCCAATCATTCATCCTCGTCAACTCTGTCTC
rJMFF034O12+          GACGGAAGACTTTCTCAACGCTATCCAACTCCAATCATTCATCCTCGTCAACTCTGTCTC
                      ____________________________________________________________
consensus             GACGGAAGACTTTCTCAACGCTATCCAACTCCAATCATTCATCCTCGTCAACTCTGTCTC
 
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JMFF034O12-           TCCCGTAGGCCAAAGCATCGCACCAATTCACGCCGGAAAGATGTATCCCTCGCCGGCCCG
rJMFF034O12+          TCCCGTAGGCCAAAGCATCGCACCAATTCACGCCGGAAAGATGTATCCCTCGCCGGCCCG
                      ____________________________________________________________
consensus             TCCCGTAGGCCAAAGCATCGCACCAATTCACGCCGGAAAGATGTATCCCTCGCCGGCCCG
 
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JMFF034O12-           ATTGCTGCGCATGCTTGCCGCCCTCTTAGCCTTTTGCTTGGGAGTCGCTCCGGCAATCGG
rJMFF034O12+          ATTGCTGCGCATGCTTGCCGCCCTCTTAGCCTTTTGCTTGGGAGTCGCTCCGGCAATCGG
JMFN038K23+                 GCGCATGCTTGCCGCCTTCTTAGCCTTTTGCTTGGGAGTCGCTCCGGCAATCGG
                      ____________________________________________________________
consensus             ATTGCTGCGCATGCTTGCCGCCCTCTTAGCCTTTTGCTTGGGAGTCGCTCCGGCAATCGG
 
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JMFF034O12-           AGACAGCTTGACGGCGTACGAGATCTTGCAGGAATACGACTTTCCGGTCGGAATTCTTCC
rJMFF034O12+          AGACAGCTTGACGGCGTACGAGATCTTGCAGGAATACGACTTTCCGGTCGGAATTCTTCC
JMFN038K23+           AGACAGCTTGACGGCGTACGAGATCTTGCAGGAATACGACTTTCCGGTCGGAATTCTTCC
                      ____________________________________________________________
consensus             AGACAGCTTGACGGCGTACGAGATCTTGCAGGAATACGACTTTCCGGTCGGAATTCTTCC
 
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JMFF034O12-           GATCGGCGTCGAGAGCTACGAGTTGAACCAAAACACCGGAAAGTTCGCGGCGTACTTTGG
rJMFF034O12+          GATCGGCGTCGAGAGCTACGAGTTGAACCAAAACACCGGAAAGTTCGCGGCGTACTTTGG
JMFN038K23+           GATCGGCGTCGAGAGCTACGAGTTGAACCAAAACACCGGAAAGTTCGCGGCGTACTTTGG
                      ____________________________________________________________
consensus             GATCGGCGTCGAGAGCTACGAGTTGAACCAAAACACCGGAAAGTTCGCGGCGTACTTTGG
 
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JMFF034O12-           CGGGTCGTGCAGTTTCACCATAGAGGGGTACAACCTCAAGTACAGTAAGAAAATCACGGG
rJMFF034O12+          CGGGTCGTGCAGTTTCACCATAGAGGGGTACAACCTCAAGTACAGTAAGAAAATCACGGG
JMFN038K23+           CGGGTCGTGCAGTTTCACCATAGAGGGGTACAACCTCAAGTACAGTAAGAAAATCACGGG
                      ____________________________________________________________
consensus             CGGGTCGTGCAGTTTCACCATAGAGGGGTACAACCTCAAGTACAGTAAGAAAATCACGGG
 
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JMFF034O12-           GACAATCTCCCAGGACAAGCTGAGAAACTTGAGTGGTGTGCAGGTGAAAATACTGTTCTT
rJMFF034O12+          GACAATCTCCCAGGACAAGCTGAGAAACTTGAGTGGTGTGCAGGTGAAAATACTGTTCTT
JMFN038K23+           GACAATCTCCCAGGACAAGCTGAGAAACTTGAGTGGTGTGCAGGTGAAAATACTGTTCTT
                      ____________________________________________________________
consensus             GACAATCTCCCAGGACAAGCTGAGAAACTTGAGTGGTGTGCAGGTGAAAATACTGTTCTT
 
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JMFF034O12-           CTGGTTGAATATAGTTGAGGTCACACATAAAGGCGATAATCTTGAGTTCTCTGTTGGGAT
rJMFF034O12+          CTGGTTGAATATAGTTGAGGTCACACATAAAGGCGATAATCTTGAGTTCTCTGTTGGGAT
JMFN038K23+           CTGGTTGAATATAGTTGAGGTCACACATAAAGGCGATAATCTTGAGTTCTCTGTTGGGAT
                      ____________________________________________________________
consensus             CTGGTTGAATATAGTTGAGGTCACACATAAAGGCGATAATCTTGAGTTCTCTGTTGGGAT
 
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JMFF034O12-           AACCTCTGCCGGCTTTGGAATTGACAATTTCTACGAGAGTC                   
rJMFF034O12+          AACCTCTGCCGGCTTTGGAATTGACAATTTCTACGAGAGTCCTCAGTGTGGTTGTGGATT
JMFN038K23+           AACCTCTGCCGGCTTTGGAATTGACAATTTCTACGAGAGTCCTCAGTGTGGTTGTGGATT
                      ____________________________________________________________
consensus             AACCTCTGCCGGCTTTGGAATTGACAATTTCTACGAGAGTCCTCAGTGTGGTTGTGGATT
 
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rJMFF034O12+          TAGCTGTGTCAACAGGAACAATTCTAATCTACAAACTCTTGTATCTTCTTCTTGATT   
JMFN038K23+           TAGCTGTGTCAACAGGAACAATTCTAATCTACAAACTCTTGTATCTTCTTCTTGATTACT
                      ____________________________________________________________
consensus             TAGCTGTGTCAACAGGAACAATTCTAATCTACAAACTCTTGTATCTTCTTCTTGATTACT
 
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JMFN038K23+           TTTCCTGATGAAGAATTATGCTCTTATACATTTCATGAACATGTTTTCTTATTTTATTAG
                      ____________________________________________________________
consensus             TTTCCTGATGAAGAATTATGCTCTTATACATTTCATGAACATGTTTTCTTATTTTATTAG
 
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JMFN038K23+           TTCAATTGAATAATGTTCTGCTTXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             TTCAATTGAATAATGTTCTGCTTNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC