| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004D05 | Sequence | 461 | 004740 (6) | ref|XP_009609806.1| | 2e-23 | PREDICTED: ethylene-responsive transcription factor 4 [Nicotiana tomentosiformi | 613 | 004740 (6) | ref|XP_009772525.1| | 3e-26 | PREDICTED: ethylene-responsive transcription factor 4 [Nicotiana sylvestris] sp |
| JMFN032K05 | Sequence | 623 | 004740 (6) | dbj|BAJ72664.1| | 3e-43 | ethylene response factor 3 [Nicotiana benthamiana] | |||||
| JMFN036A19 | Sequence | 620 | 004740 (6) | dbj|BAJ72664.1| | 3e-44 | ethylene response factor 3 [Nicotiana benthamiana] | |||||
| JMFN038B21 | Sequence | 629 | 004740 (6) | dbj|BAJ72664.1| | 5e-43 | ethylene response factor 3 [Nicotiana benthamiana] | |||||
| JMFS130F08 | Sequence | 621 | 004740 (6) | dbj|BAJ72664.1| | 3e-44 | ethylene response factor 3 [Nicotiana benthamiana] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF004D05- G
____________________________________________________________
consensus G
. : . : . : . : . : . :
rJMFF004D05- AATAACGAGTTACAGTTCAGTAGGAACAGCAAGAGGAATTGTAAGCAATTCGCTCGTCGG
____________________________________________________________
consensus AATAACGAGTTACAGTTCAGTAGGAACAGCAAGAGGAATTGTAAGCAATTCGCTCGTCGG
. : . : . : . : . : . :
rJMFF004D05- CTGTAAAAAAACACGACAGTTCACTCGAATTCTATGTACAAAAACAAGCAATTAGTGATC
____________________________________________________________
consensus CTGTAAAAAAACACGACAGTTCACTCGAATTCTATGTACAAAAACAAGCAATTAGTGATC
. : . : . : . : . : . :
rJMFF004D05- TCATTCTAGTAATCATTGATTAAGATTAATCAAGCTTCTGTGGGTGGAGCAAGGTTAAGA
____________________________________________________________
consensus TCATTCTAGTAATCATTGATTAAGATTAATCAAGCTTCTGTGGGTGGAGCAAGGTTAAGA
. : . : . : . : . : . :
rJMFF004D05- TCAAGGTTAAGGCGTTTCTCTGCAACGCCGGCGCCGGCGCCGACAAAGTGGTTCTCTTCG
JMFN032K05+ G
____________________________________________________________
consensus TCAAGGTTAAGGCGTTTCTCTGCAACGCCGGCGCCGGCGCCGACAAAGTGGTTCTCTTCG
. : . : . : . : . : . :
rJMFF004D05- ACGACGGAGAAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
JMFN032K05+ ACGACGGAGAAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAA-GATTCGCCGGCTCG
JMFN036A19+ AAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
JMFS130F08+ AAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
JMFN038B21+ TTGGAAGGATTCGCCGGCTCG
____________________________________________________________
consensus ACGACGGAGAAGGTGCTTGAGTCGCTGAAAGCGGGGCGTTTGGAAGGATTCGCCGGCTCG
. : . : . : . : . : . :
rJMFF004D05- AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFN032K05+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFN036A19+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFS130F08+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
JMFN038B21+ AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
____________________________________________________________
consensus AACTGGTCCGGGAGTGGGTGGCTAACGGCGCCGGGCCGCCACAGCGTCTCGAACAGCAGA
. : . : . : . : . : . :
rJMFF004D05- ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFN032K05+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFN036A19+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFS130F08+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
JMFN038B21+ ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
____________________________________________________________
consensus ACCGGCTGTCCGTTGGGGAGAACGGCGACGGCCGGCTGAGGGTGAAAGAACTGAAATGTA
. : . : . : . : . : . :
rJMFF004D05- TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFN032K05+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFN036A19+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFS130F08+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
JMFF004D05+ TAGTATTCANGGATCTAACGCCGGCGGCNTCGCCGGAACCAAGGNGGCGC
JMFN038B21+ TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
____________________________________________________________
consensus TTATTATTATTAGTATTCACGGATCTAACGCCGGCGGCCTCGCCGGAACCAAGGCGGCGC
. : . : . : . : . : . :
rJMFF004D05- GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFN032K05+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFN036A19+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFS130F08+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFF004D05+ GTGAGATCCAGCTCCAGTGGGANNTGNGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
JMFN038B21+ GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
____________________________________________________________
consensus GTGAGATCCAGCTCCAGTGGGAACTGCGGCGCGTGGCCGCCCGTCTCGCTCCCGGAAGAC
. : . : . : . : . : . :
rJMFF004D05- TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFN032K05+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFN036A19+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFS130F08+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFF004D05+ TCCACCGTGCTGCTNTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
JMFN038B21+ TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
____________________________________________________________
consensus TCCACCGTGCTGCTCTGACTGGGGCTGTGATTCTCCGACGGCGAGGGGAAGTTGGTCTTC
. : . : . : . : . : . :
rJMFF004D05- GCCTTANCCCCA
JMFN032K05+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFN036A19+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFS130F08+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFF004D05+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
JMFN038B21+ GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
____________________________________________________________
consensus GCCTTAGCCCCACGGAACTCCCTGGCGGCGGCGTCATACGCCCGCGCCGCCTCCTCCGCC
. : . : . : . : . : . :
JMFN032K05+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFN036A19+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFS130F08+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFF004D05+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
JMFN038B21+ GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
____________________________________________________________
consensus GTGTCAAAAGTCCCCAGCCACACGCGGCTCTTCTTGCCCGGATCACGGATTTCCGCGGCG
. : . : . : . : . : . :
JMFN032K05+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFN036A19+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFS130F08+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFF004D05+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
JMFN038B21+ TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
____________________________________________________________
consensus TAGCGCCCCCACGGCCTCTTCCTCACGCCTCTGTAGTGCACCTCCTTAATGCCGTTCACT
. : . : . : . : . : . :
JMFN032K05+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFN036A19+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFS130F08+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFF004D05+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
JMFN038B21+ TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
____________________________________________________________
consensus TTCCCGGCTCCACCCTTAACCCCGCCGTCCTCTCTGCCCTTCACCGCCATAGCTACAACC
. : . : . : . : . : . :
JMFN032K05+ TACTCAAGAAACTCAGAAAGGAC
JMFN036A19+ TACTCAAGAAACTCAGAAAGGACGAATAA
JMFS130F08+ TACTCAAGAAACTCAGAAAGGACGAATAA
JMFF004D05+ TACTCAAGAAACTCAGAAAGGACGAATAAGAAGAAGAAGAATGGAAG
JMFN038B21+ TACTCAAGAAACTCAGAAAGGACGAATAAGAAGAAGAAGAATGGAAGTGATGAGGAAGAA
____________________________________________________________
consensus TACTCAAGAAACTCAGAAAGGACGAATAAGAAGAAGAAGAATGGAAGTGATGAGGAAGAA