Contig 004737:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044H01-                          GAACAAGTAGTAGTGCTTTATAGGAGTGATTAAAAGTGAGATGAT
rJMFF045B17-                      ATTGAACAAGTAGTAGTGCTTTATAGGAGTGATTAAAAGTGAGATGAT
rJMFF042H18-                         GAACAAGTAGTAGTGCTTTATAGGAGTGATTAAAAGTGAGATGAT
rJMSF032A06-                                                          AAGTGAGATGAT
rJMSF023P09-                                                               AGATGAT
rJMSF015D12-                                                          AAGTGAGATGAT
                      ____________________________________________________________
consensus                         ATTGAACAAGTAGTAGTGCTTTATAGGAGTGATTAAAAGTGAGATGAT
 
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JMFN044H01-           TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
rJMFF045B17-          TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
rJMFF042H18-          TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
rJMSF032A06-          TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
rJMSF023P09-          TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
rJMSF015D12-          TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
                      ____________________________________________________________
consensus             TGTTTGCTCAATTGGCTTAAAAGCCAATTTAAGCCTCAGAGGTTCTCTAAACACACTCTT
 
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JMFN044H01-           CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
rJMFF045B17-          CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
rJMFF042H18-          CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
rJMSF032A06-          CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
rJMSF023P09-          CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
rJMSF015D12-          CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
JMFF045B17+                                                                    CCT
                      ____________________________________________________________
consensus             CAAATGAAAAATCTAAACACAAACATCTTTCATAGTTGTCACATTATGAGCTTAAAGCCT
 
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JMFN044H01-           TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
rJMFF045B17-          TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
rJMFF042H18-          TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
rJMSF032A06-          TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
rJMSF023P09-          TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
rJMSF015D12-          TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
JMFF045B17+           TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
JMSF032A06+                                                          GGGGGCTGGAGAG
                      ____________________________________________________________
consensus             TGAGAATTAGTCATGCTGCTACTTCACTTCACTTCTTTCTCTTCTTTGGGGGCTGGAGAG
 
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JMFN044H01-           CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
rJMFF045B17-          CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
rJMFF042H18-          CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
rJMSF032A06-          CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
rJMSF023P09-          CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
rJMSF015D12-          CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
JMFF045B17+           CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
JMFN018E01+                    CGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
JMSF032A06+           CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
JMFF042H18+                                                                      T
                      ____________________________________________________________
consensus             CCTCCTCTTCGTCTTCATCATCTTCGTCCTCGTTCTCCTCCTCATCCTCGTGCTCCTGTT
 
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JMFN044H01-           CCACAGCTTCCTCCTCCCCGTCTTCTCCCTCGTCCTCATCATCATTATCTTCATCATCTT
rJMFF045B17-          CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
rJMFF042H18-          CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
rJMSF032A06-          CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
rJMSF023P09-          CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
rJMSF015D12-          CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
JMFF045B17+           CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
JMFN018E01+           CCACAGCTTCCTCCTCNCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
JMSF032A06+           CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
JMFF042H18+           CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
                      ____________________________________________________________
consensus             CCACAGCTTCCTCCTCCCCGTCTTCGCCCTCGTCCTCATCATCATTATCTTCATCATCTT
 
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JMFN044H01-           CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
rJMFF045B17-          CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
rJMFF042H18-          CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTCCACCA-TCATCCCCATCTTCCTCT
rJMSF032A06-          CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
rJMSF023P09-          CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
rJMSF015D12-          CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
JMFF045B17+           CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
JMFN018E01+           CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
JMSF032A06+           CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCATTCATCCCCATCTTCCTCT
JMSF015D12+                                                     TCATCCCCATCTTCCTCT
JMFF042H18+           CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTCCACCA-TCATCCCCATCTTCCTCT
JMFN037I04+                                                ACCA-TCATCCCCATCTTCCTCT
                      ____________________________________________________________
consensus             CATTGTCACCATCGTCGTTGTTGTGTCCTTCGCCTTCACCA-TCATCCCCATCTTCCTCT
 
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JMFN044H01-           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
rJMFF045B17-          TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
rJMFF042H18-          TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
rJMSF032A06-          TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
rJMSF023P09-          TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
rJMSF015D12-          TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
JMFF045B17+           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
JMFN018E01+           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
JMSF032A06+           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
JMSF015D12+           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
JMFF042H18+           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
JMFN037I04+           TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGNTGCTCTTTCCGTTCTCATTG
                      ____________________________________________________________
consensus             TCTCCATTCTCCCCGCTCTCGCCTCCCTCCCCACCCGGGCTGCTCTTTCCGTTCTCATTG
 
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JMFN044H01-           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
rJMFF045B17-          TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
rJMFF042H18-          TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
rJMSF032A06-          TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
rJMSF023P09-          TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
rJMSF015D12-          TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
JMFF045B17+           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
JMFN018E01+           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
JMSF032A06+           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
JMSF015D12+           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
JMFF042H18+           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
JMFN037I04+           TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
                      ____________________________________________________________
consensus             TTCACCTGAGCTTCTCCATCGGAGAATTCACCCTCACCATCGGCAAATTCACCACTCCCA
 
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JMFN044H01-           TTCTCATCGCCATCCTCTCCCTCCG                                   
rJMFF045B17-          TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
rJMFF042H18-          TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
rJMSF032A06-          TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
rJMSF023P09-          TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
rJMSF015D12-          TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
JMFF045B17+           TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
JMFN018E01+           TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
JMSF032A06+           TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
JMSF015D12+           TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
JMFF042H18+           TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
JMFN037I04+           TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
                      ____________________________________________________________
consensus             TTCTCATCGCCATCCTCTCCCTCCGCGTCAACCACTTTGGACTGGCTGTTCATGCTATGA
 
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rJMFF045B17-          TCTCCTTTCCCCTTGGCT                                          
rJMFF042H18-          TCTCCTTTCCCCTTGGCTTCCC                                      
rJMSF032A06-          TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
rJMSF023P09-          TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
rJMSF015D12-          TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
JMFF045B17+           TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
JMFN018E01+           TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
JMSF032A06+           TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
JMSF015D12+           TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
JMFF042H18+           TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
JMFN037I04+           TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
                      ____________________________________________________________
consensus             TCTCCTTTCCCCTTGGCTTCCCTTGTCGACCTCATTAGGTCTTGAAGCGAGTAAAGGGGG
 
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rJMSF032A06-          CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
rJMSF023P09-          CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
rJMSF015D12-          CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
JMFF045B17+           CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
JMFN018E01+           CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
JMSF032A06+           CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
JMSF015D12+           CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
JMFF042H18+           CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
JMFN037I04+           CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
                      ____________________________________________________________
consensus             CGAGCGTTGACCGCGAAAAATGAGCTAAGGAGACAAGGGCGAGAGTGAGCGGCGCACGTT
 
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rJMSF032A06-          AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCA    
rJMSF023P09-          AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGGTGCAGGC 
rJMSF015D12-          AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
JMFF045B17+           AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
JMFN018E01+           AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
JMSF032A06+           AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
JMSF015D12+           AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
JMFF042H18+           AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
JMFN037I04+           AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
                      ____________________________________________________________
consensus             AGCAAATCATGGTTAACCATCACTTCCATATCTGTACGGTCCCGACACCTGTTGCAGGCG
 
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rJMSF015D12-          GAGA                                                        
JMFF045B17+           GAGATGAGAAGGAAGAAAGCGG                                      
JMFN018E01+           GAGATGAGAAGGAAGAAAGCGGAGAAAACAAAATTTTGAAGATCAGAGAAGAGA      
JMSF032A06+           GAGATGAGAAGGAAGAAAGCGGAGAAAACAAAATTTTGAAGATCAGAGAAGAGAGGAGAG
JMSF015D12+           GAGATGAGAAGGAAGAAAGCGGAGAAAACAAAATTTTGAAGATCAGAGAAGAGAGGAGAG
JMFF042H18+           GAGATGAGAAGGAAGAAAGCGGAGAAAACAAAATTTTGAAGATCAGAGAAGAGAGGAGAG
JMFN037I04+           GAGATGAGAAGGAAGAAAGCGGAGAAAACAAAATTTTGAAGATCAGAGAAGAGAGGAGAG
                      ____________________________________________________________
consensus             GAGATGAGAAGGAAGAAAGCGGAGAAAACAAAATTTTGAAGATCAGAGAAGAGAGGAGAG
 
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JMSF032A06+           GAGAGGGGATAATGGAAGGAGGTTTTCAGGTTTCT                         
JMSF015D12+           GAGAGGGGATAATGGAAGGAGGTTTTCAGGTTTCT                         
JMFF042H18+           GAGAGGGGATAATGGAAGGAGGTTTTCAGGTTTCTGCTTTGCAGAC              
JMFN037I04+           GAGAGGGGATAATGGAAGGAGGTTTTCAGGTTTCTGCTTTGCAGACGTACTGGTTTTGGT
                      ____________________________________________________________
consensus             GAGAGGGGATAATGGAAGGAGGTTTTCAGGTTTCTGCTTTGCAGACGTACTGGTTTTGGT
 
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JMFN037I04+           ATTGAATCAAGGGTGTTGCAACCCCTCACCCATTCTTGGCCGTCGGATCATAATCTCAAA
                      ____________________________________________________________
consensus             ATTGAATCAAGGGTGTTGCAACCCCTCACCCATTCTTGGCCGTCGGATCATAATCTCAAA