Contig 004735:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN035O03Sequence122004735 (7)
JMFS029H08Sequence619004735 (7)emb|CDP03866.1|4e-71unnamed protein product [Coffea canephora]
JMFS033C07Sequence617004735 (7)ref|XP_009784360.1|9e-66PREDICTED: transcriptional corepressor LEUNIG-like isoform X2 [Nicotiana sylves
JMFS035F04Sequence618004735 (7)emb|CDP03866.1|4e-59unnamed protein product [Coffea canephora]
JMFS040D08Sequence620004735 (7)emb|CDP03866.1|7e-72unnamed protein product [Coffea canephora]
JMFS075C06Sequence627004735 (7)emb|CDP03866.1|5e-61unnamed protein product [Coffea canephora]
JMFS164F05Sequence585004735 (7)ref|XP_009784357.1|2e-56PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Nicotiana sylves

Alignment

This contig is upended


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JMFS040D08+                                             TACACTGGCAGATGGCTGCCCCACCA
JMFS029H08+                                              ACACTGGCAGATGGCTGCCCCACCA
JMFS033C07+                                                                     CA
                      ____________________________________________________________
consensus                                               TACACTGGCAGATGGCTGCCCCACCA
 
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JMFS040D08+           TGCCTTCAGAATTAATAGCATTAATAGGACTTCCTAGTGGAGGATGATTAGGATCCCTAC
JMFS029H08+           TGCCTTCAGAATTAATAGCATTAATAGGACTTCCTAGTGGAGGATGATTAGGATCCCTAC
JMFS033C07+           TGCCTTCAGAATTAATAGCATTAATAGGACTTCCTAGTGGAGGATGATTAGGATCCCTAC
JMFS075C06+                                       ACTTCCTAGTGGAGGATGATTAGGATCCCTAC
JMFS035F04+                                                   AGGATGATTAGGATCCCTAC
                      ____________________________________________________________
consensus             TGCCTTCAGAATTAATAGCATTAATAGGACTTCCTAGTGGAGGATGATTAGGATCCCTAC
 
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JMFS040D08+           GTAACTGGACATTTCGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
JMFS029H08+           GTAACTGGACATTTCGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
JMFS033C07+           GTAACTGGACATTTCGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
JMFS075C06+           GTAACTGGACATTTCGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
JMFS035F04+           GTAACTGGACATTTCGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
JMFS164F05+                         CGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
                      ____________________________________________________________
consensus             GTAACTGGACATTTCGCTGCTGCATGAGTTGCAATTGCTGCATTTGCAGCTGCTGTTGAT
 
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JMFS040D08+           GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
JMFS029H08+           GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
JMFS033C07+           GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
JMFS075C06+           GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
JMFS035F04+           GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
JMFS164F05+           GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
                      ____________________________________________________________
consensus             GTTCCCTTGCTTTCATTTGTTGTGTCTCTATGTAAGCAGCAGCTGCCTCTGAATGCTTCT
 
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JMFS040D08+           CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTC
JMFS029H08+           CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTC
JMFS033C07+           CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTC
JMFS075C06+           CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTC
JMFS035F04+           CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTC
JMFS164F05+           CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTA
                      ____________________________________________________________
consensus             CATTAGTCCTTGCTATGAAGATGTCCCAAAACACAGACCACCATTCAAAAAGAAACCCTC
 
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JMFS040D08+           CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
JMFS029H08+           CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
JMFS033C07+           CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
JMFS075C06+           CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
JMFS035F04+           CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
JMFS164F05+           CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
                      ____________________________________________________________
consensus             CAGGTGCATCAATAGCTACAGGATCCGTCGCTACCTTCCCTTCTGTCATGAAAGCTTTTG
 
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JMFS040D08+           CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
JMFS029H08+           CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
JMFS033C07+           CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
JMFS075C06+           CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
JMFS035F04+           CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
JMFS164F05+           CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
                      ____________________________________________________________
consensus             CTGAATTGTGCAGTTTTCTTTTCAACAAGTAATCATGAATGTAAACATCAAGCATCTTAT
 
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JMFS040D08+           CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
JMFS029H08+           CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
JMFS033C07+           CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
JMFS075C06+           CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
JMFS035F04+           CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
JMFS164F05+           CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
                      ____________________________________________________________
consensus             CTGCTTCCCAATTACTCTGAGCCATGAGTTCACTCCAATTCCACAATCAAGCAGTAAAAG
 
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JMFS040D08+           AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
JMFS029H08+           AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
JMFS033C07+           AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
JMFS075C06+           AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
JMFS035F04+           AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
JMFS164F05+           AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
                      ____________________________________________________________
consensus             AACACTTTCTCACTGCAGTCTCAGCCCGTTCTATTCATGAAAGCCTCAAACTCATTCCTA
 
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JMFS040D08+           ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
JMFS029H08+           ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
JMFS033C07+           ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
JMFS075C06+           ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
JMFS035F04+           ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
JMFS164F05+           ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
JMFN035O03+                                                                     AG
                      ____________________________________________________________
consensus             ATTCAGAGATCAAACGGTGCATTTCCCAACAGAGTAAGATCTCCCGGAACCAAGTCCTAG
 
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JMFS040D08+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCG      
JMFS029H08+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCG      
JMFS033C07+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCGGAGATT
JMFS075C06+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCGGAGATT
JMFS035F04+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCGGAGATT
JMFS164F05+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCGGAGATT
JMFN035O03+           TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCGGAGATT
                      ____________________________________________________________
consensus             TTAATGCGTTTTTAGGGAGGGGTTTTCAGATTTTTCTCGCGAAAAAGAAAGTCGGAGATT
 
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JMFS033C07+           CTCAGTGAAGCTGAA                                             
JMFS075C06+           CTCAGTGAAGCTGAAGTTGAAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGACGCA     
JMFS035F04+           CTCAGTGAAGCTGAAGTTGAAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGACGCA     
JMFS164F05+           CTCAGTGAAGCTGAAGTTGAAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGACGCA     
JMFN035O03+           CTCAGTGAAGCTGAAGTTGAAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGACGCACAGAC
                      ____________________________________________________________
consensus             CTCAGTGAAGCTGAAGTTGAAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGACGCACAGAC