Contig 004733:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN011L15+                                                    TAGTACTTTAGTTATTACT
JMFN035B05+                                                             AGTTATTACT
                      ____________________________________________________________
consensus                                                      TAGTACTTTAGTTATTACT
 
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JMFN011L15+           ACTCAGCCAACAATGCATTACACAATTGTACTGTATCATATTAAAATGCATAATGACAAG
JMFN035B05+           ACTCAGCCAACAATGCATTACACAATTGTACTGTATCATATTAAAATGCATAATGACAAG
                      ____________________________________________________________
consensus             ACTCAGCCAACAATGCATTACACAATTGTACTGTATCATATTAAAATGCATAATGACAAG
 
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JMFN011L15+           TCATCAGTTATTACAAGCGCTGGCGTCGGGACTGAATCTCTGAAGGATCAACTAGACCTT
JMFN035B05+           TCATCAGTTATTACAAGCGCTGGCGTCGGGACTGAATCTCTGAAGGATCAACTAGACCTT
                      ____________________________________________________________
consensus             TCATCAGTTATTACAAGCGCTGGCGTCGGGACTGAATCTCTGAAGGATCAACTAGACCTT
 
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JMFN011L15+           CTAACACAACAAGATCATCCAATAGGCTCAGTTTCTCCTCCTCGAGCGCCTTTGTCTCGT
JMFN035B05+           CTAACACAACAAGATCATCCAATAGGCTCAGTTTCTCCTCCTCGAGCGCCTTTGTCTCGT
                      ____________________________________________________________
consensus             CTAACACAACAAGATCATCCAATAGGCTCAGTTTCTCCTCCTCGAGCGCCTTTGTCTCGT
 
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JMFN011L15+           CTTCGACTAACTTTAACTCTTTCTGAAGCGTGCAGCTTTCCTCCTCCAACAGCAAATACT
JMFN035B05+           CTTCGACTAACTTTAACTCTTTCTGAAGCGTGCAGCTTTCCTCCTCCAACAGCAAATACT
                      ____________________________________________________________
consensus             CTTCGACTAACTTTAACTCTTTCTGAAGCGTGCAGCTTTCCTCCTCCAACAGCAAATACT
 
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JMFN011L15+           TTCGCCTCAGTACACGATATTCATCTCCAGAAGTAGAGGCATCTACTGCCAATGAATTTG
JMFN035B05+           TTCGCCTCAGTACACGATATTCATCTCCAGAAGTAGAGGCATCTACTGCCAATGAATTTG
                      ____________________________________________________________
consensus             TTCGCCTCAGTACACGATATTCATCTCCAGAAGTAGAGGCATCTACTGCCAATGAATTTG
 
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JMFN011L15+           GCTTTGGTTTCTCTGATTTGTGGAACAACACGGAAGCTTCATTTGTCTGGCCTCTTTTGG
JMFN035B05+           GCTTTGGTTTCTCTGATTTGTGGAACAACACGGAAGCTTCATTTGTCTGGCCTCTTTTGG
                      ____________________________________________________________
consensus             GCTTTGGTTTCTCTGATTTGTGGAACAACACGGAAGCTTCATTTGTCTGGCCTCTTTTGG
 
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JMFN011L15+           AAGCCTTCTGCCCTACTTGAACCGACAGGGCCTTCTTTTGTGCAGCAGCTTTCTTTTTCC
JMFN035B05+           AAGCCTTCTGCCCTACTTGAACCGACAGGGCCTTCTTTTGTGCAGCAGCTTTCTTTTTCC
                      ____________________________________________________________
consensus             AAGCCTTCTGCCCTACTTGAACCGACAGGGCCTTCTTTTGTGCAGCAGCTTTCTTTTTCC
 
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JMFN011L15+           TTGGCTTGGGAACTAGATCATTCTCAGGTAGCACTATCCTCTGATCTTGCATCTTGTGAA
JMFN035B05+           TTGGCTTGGGAACTAGATCATTCTCAGGTAGCACTATCCTCTGATCTTGCATCTTGTGAA
                      ____________________________________________________________
consensus             TTGGCTTGGGAACTAGATCATTCTCAGGTAGCACTATCCTCTGATCTTGCATCTTGTGAA
 
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JMFN011L15+           ACAAATCGGCACCGGTAGAATTTCTGTGTGGCGAAGAAGAGAGCCTTCGTTCTCCTTCCT
JMFN035B05+           ACAAATCGGCACCGGTAGAATTTCTGTGTGGCGAAGAAGAGAGCCTTCGTTCTCCTTCCT
                      ____________________________________________________________
consensus             ACAAATCGGCACCGGTAGAATTTCTGTGTGGCGAAGAAGAGAGCCTTCGTTCTCCTTCCT
 
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JMFN011L15+           CCCTGTCACTGCAATCAAAACCTTCCCGGGTTCGTTTGGTGCGTAAATATGGAGGAG   
JMFN035B05+           CCCTGTCACTGCAATCAAAACCTTCCCGGGTTCGTTTGGTGCGTAAATATGGAGGAGAAA
                      ____________________________________________________________
consensus             CCCTGTCACTGCAATCAAAACCTTCCCGGGTTCGTTTGGTGCGTAAATATGGAGGAGAAA