clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF034B03 | Sequence | 482 | 004728 (5) | ref|XP_011075483.1| | 1e-94 | PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED | 554 | 004728 (5) | ref|XP_011075483.1| | 4e-73 | PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED |
JMFN031D19 | Sequence | 577 | 004728 (5) | ref|XP_011075483.1| | 8e-122 | PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED | |||||
JMFN038E21 | Sequence | 552 | 004728 (5) | ref|XP_011075483.1| | 8e-122 | PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED | |||||
JMFS134D11 | Sequence | 615 | 004728 (5) | ref|XP_011075483.1| | 5e-121 | PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED |
This contig is upended
. : . : . : . : . : . :
rJMFF034B03- TATTGCTACCACACAAGATTTAGAAAGAAAAAAAGAAAAATGC
____________________________________________________________
consensus TATTGCTACCACACAAGATTTAGAAAGAAAAAAAGAAAAATGC
. : . : . : . : . : . :
rJMFF034B03- ATCTTGAAAATATCTTGCAAAATGAACCTTAACTATATCCCTCAAGAGAAACTGCAAAAT
____________________________________________________________
consensus ATCTTGAAAATATCTTGCAAAATGAACCTTAACTATATCCCTCAAGAGAAACTGCAAAAT
. : . : . : . : . : . :
rJMFF034B03- TGCAGTCAAAGTTTTTCCAGTACAGGCATAGAAGCCTAGACAGAAATTGCGCTCACTCTT
____________________________________________________________
consensus TGCAGTCAAAGTTTTTCCAGTACAGGCATAGAAGCCTAGACAGAAATTGCGCTCACTCTT
. : . : . : . : . : . :
rJMFF034B03- CATCTTCTTCGTCTCCATCACCACCCGCTGCCTTCTTAGCTGCAGCCTTCTGGTTCTTTC
JMFS134D11+ TCCATCACCACCCGCTGCCTTTTTAGCTGCAGCCTTCTGGTTCTTTC
JMFN031D19+ GCAGCCTTCTGGTTCTTTC
____________________________________________________________
consensus CATCTTCTTCGTCTCCATCACCACCCGCTGCCTTTTTAGCTGCAGCCTTCTGGTTCTTTC
. : . : . : . : . : . :
rJMFF034B03- GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
JMFN038E21+ TCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
JMFS134D11+ GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
JMFN031D19+ GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
____________________________________________________________
consensus GCTTCACTCTGCCAGGGCGACCACCGCCAAATGGACTGGTGAGCGAGAAATCGATGTGCT
. : . : . : . : . : . :
rJMFF034B03- TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
JMFN038E21+ TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
JMFS134D11+ TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
JMFF034B03+ TCTTCCAACCCTGA
JMFN031D19+ TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
____________________________________________________________
consensus TCTGGGAGTCCAGTCTGACCATGAAGGATGGAACATTCACCACCTGTCTTCCAACCCTGA
. : . : . : . : . : . :
rJMFF034B03- TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFN038E21+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFS134D11+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFF034B03+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
JMFN031D19+ TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
____________________________________________________________
consensus TGTGCCTTTGCCTAATGAGAACTCTTGCATGATGGATAGACTTTGCCATACCAGCCTTGA
. : . : . : . : . : . :
rJMFF034B03- ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFN038E21+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFS134D11+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFF034B03+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
JMFN031D19+ ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
____________________________________________________________
consensus ATACTAGAGTTTGGAGACGGCGCTCAAGGAAATTTTCCACAGTGAGAGCAAGGACATAAT
. : . : . : . : . : . :
rJMFF034B03- CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFN038E21+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFS134D11+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFF034B03+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
JMFN031D19+ CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
____________________________________________________________
consensus CGAGCTTGTTCTGGCTCTCGTCCAGCAACCCATACCTGTTCATTCTCCTAAGGAGGGCAT
. : . : . : . : . : . :
rJMFF034B03- CACCCTCAAAAATACGGCGTGGATCCTTCTC
JMFN038E21+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
JMFS134D11+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
JMFF034B03+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
JMFN031D19+ CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
____________________________________________________________
consensus CACCCTCAAAAATACGGCGTGGATCCTTCTCATCAAGAGTCAGAAGCATTCTTGCATTAT
. : . : . : . : . : . :
JMFN038E21+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
JMFS134D11+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
JMFF034B03+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
JMFN031D19+ TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
____________________________________________________________
consensus TCCTGATACGGCTCAAAGCATACTGAACTCTCCAAAGCTCCCTCTTGCACCTAAGCCCAT
. : . : . : . : . : . :
JMFN038E21+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
JMFS134D11+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
JMFF034B03+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
JMFN031D19+ ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
____________________________________________________________
consensus ATTCACCAACAAGCTTCAGCTCAGCATCCAAACGCTCCTTCTCATATGGACGTCGAGGCT
. : . : . : . : . : . :
JMFN038E21+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTT
JMFS134D11+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTT
JMFF034B03+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTT
JMFN031D19+ TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTTCACCTGCCGCG
____________________________________________________________
consensus TTTTGAATGTTTTCCCATAGTTGCGGTAAAAGGAGACGTGCACCATGTTCACCTGCCGCG