| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN016A10 | Sequence | 509 | 004725 (6) | ref|XP_011075897.1| | 127 | PREDICTED: 60S acidic ribosomal protein P1-like [Sesamum indicum] | |||||
| JMFN016H11 | Sequence | 505 | 004725 (6) | ref|XP_011075897.1| | 128 | PREDICTED: 60S acidic ribosomal protein P1-like [Sesamum indicum] | |||||
| JMFN029N06 | Sequence | 533 | 004725 (6) | ref|XP_011075897.1| | 128 | PREDICTED: 60S acidic ribosomal protein P1-like [Sesamum indicum] | |||||
| JMFN030P20 | Sequence | 483 | 004725 (6) | ref|XP_011075897.1| | 127 | PREDICTED: 60S acidic ribosomal protein P1-like [Sesamum indicum] | |||||
| JMFN031M13 | Sequence | 600 | 004725 (6) | ref|XP_011075897.1| | 125 | PREDICTED: 60S acidic ribosomal protein P1-like [Sesamum indicum] | |||||
| JMFN036I23 | Sequence | 517 | 004725 (6) | ref|XP_011075897.1| | 130 | PREDICTED: 60S acidic ribosomal protein P1-like [Sesamum indicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN036I23+ AAAAAACAAAACTTGTTAGGTAATAGA
JMFN016H11+ AAAAAACAAAACTTGTTAGGTAATAGA
____________________________________________________________
consensus AAAAAACAAAACTTGTTAGGTAATAGA
. : . : . : . : . : . :
JMFN036I23+ GGTCCAGAAAAATAGGTATACAACTGAGAAATGTCTTAAGCATAAACAAGAACTATTATC
JMFN016H11+ GGTCCAGAAAAATAGGTATACAACTGAGAAATGTCTTAAGCATAAACAAGAACTATTATC
JMFN030P20+ ACTATTATC
JMFN016A10+ ACTATTATC
____________________________________________________________
consensus GGTCCAGAAAAATAGGTATACAACTGAGAAATGTCTTAAGCATAAACAAGAACTATTATC
. : . : . : . : . : . :
JMFN036I23+ CTTGTAACAATAATAATGCACCTCCTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
JMFN031M13+ CTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
JMFN016H11+ CTTGTAACAATAATAATGCACCTCCTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
JMFN030P20+ CTTGTAACAATACTAGTGCACCTCCTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
JMFN016A10+ CTTGTAACAATACTAGTGCACCTCCTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
JMFN029N06+ CTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
____________________________________________________________
consensus CTTGTAACAATACTAGTGCACCTCCTAATCGAACAAGCTGAATCCCATGTCATCGTCACT
. : . : . : . : . : . :
JMFN036I23+ CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGAGCAGCTGCGGCTGGGGCAGC
JMFN031M13+ CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGAGCAGCTGCGGCTGGGGCAGC
JMFN016H11+ CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGAGCAGCTGCGGCTGGGGCAGC
JMFN030P20+ CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGTGCAGCTGCGGCAGGGGCAGC
JMFN016A10+ CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGTGCAGCTGCGGCAGGGGCAGC
JMFN029N06+ CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGAGCAGCTGCGGCTGGGGCAGC
____________________________________________________________
consensus CTCTTCCTTAGGTTCTTCCTTCTTTTCCTCAGCAGCTGGAGCAGCTGCGGCTGGGGCAGC
. : . : . : . : . : . :
JMFN036I23+ ACCACCGGCAGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCGCCGACGTT
JMFN031M13+ ACCACCGGCAGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCGCCGACGTT
JMFN016H11+ ACCACCGGCAGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCGCCGACGTT
JMFN030P20+ ACCACCGGCGGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCACCGACGTT
JMFN016A10+ ACCACCGGCGGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCACCGACGTT
JMFN029N06+ ACCACCGGCAGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCGCCGACGTT
____________________________________________________________
consensus ACCACCGGCAGCAGGAGCAGCAACGGCAACAGCGCCACCTCCACCACCGGCGCCGACGTT
. : . : . : . : . : . :
JMFN036I23+ CATGATGAGATCCTCAATATTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTAGGCCAGTA
JMFN031M13+ CATGATGAGATCCTCAATATTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTATGCCAGTA
JMFN016H11+ CATGATGAGATCCTCAATATTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTAGGCCAGTA
JMFN030P20+ CATGATGAGATCCTCAATGTTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTAGGCCAGTA
JMFN016A10+ CATGATGAGATCCTCAATGTTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTAGGCCAGTA
JMFN029N06+ CATGATGAGATCCTCAATATTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTAGGCCAGTA
____________________________________________________________
consensus CATGATGAGATCCTCAATATTCCTCTTCTCACAGAGCTTGGCGAAGAGGCTAGGCCAGTA
. : . : . : . : . : . :
JMFN036I23+ CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCAGCAATCTTCTCCGCAGTAACGGG
JMFN031M13+ CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCAGCAATCTTCTCCGCAGTAACGGG
JMFN016H11+ CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCAGCAATCTTCTCCGCAGTAACGGG
JMFN030P20+ CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCGGCAATCTTCTCCGCGGTAACGGG
JMFN016A10+ CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCGGCAATCTTCTCCGCGGTAACGGG
JMFN029N06+ CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCAGCAATCTTCTCCGCAGTAACGGG
____________________________________________________________
consensus CGACTCCACGGTGACATTAGCCGACTTCACAAGTGCAGCAATCTTCTCCGCAGTAACGGG
. : . : . : . : . : . :
JMFN036I23+ GATTCCATCGTCGTGGAGAATCAAGGCCGCATAGGTACAGGCGAGTTCTCCGATCGACAT
JMFN031M13+ GATTCCATCGTCGTGGAGAATCAAGGCCGCATAGGTACAGGCGAGTTCTCCGATCGACAT
JMFN016H11+ GATTCCATCGTCGTGGAGAATCAAGGCCGCATAGGTACAGGCGAGTTCTCCGATTGACAT
JMFN030P20+ GATTCCATCGTCGTGGAGGATCAATGCAGCATAGGTACACGCTAGCTCTCCAATCGACAT
JMFN016A10+ GATTCCATCGTCGTGGAGGATCAATGCAGCATAGGTACACGCTAGCTCTCCAATCGACAT
JMFN029N06+ GATTCCATCGTCGTGGAGAATCAAGGCCGCATAGGTACAGGCGAGTTCTCCGATCGACAT
____________________________________________________________
consensus GATTCCATCGTCGTGGAGAATCAAGGCCGCATAGGTACAGGCGAGTTCTCCGATCGACAT
. : . : . : . : . : . :
JMFN036I23+ TTTCGATC
JMFN031M13+ TTTCGATCTTCAATCTACAGGTATACCGATGCTACTAGGGATTTCTTGCTG
JMFN016H11+ TTTCGATCTTCAATCTACAGGTATACCGATGCTACTAGGGATTTCTTGCTGCTAGCGT
JMFN030P20+ TTTCGATCTTCAATCTACAGGTATACCAATGCCACTAGGGATTTCTTG
JMFN016A10+ TTTCGATCTTCAATCTACAGGTATACCAATGCCACTAGGGATTTCTTGCTGCTAGCGT
JMFN029N06+ TTTCGATCTTCAATCTACAGGTATACCGATGCTACTAGGGATTTCTTGCTGCTAGCGTGA
____________________________________________________________
consensus TTTCGATCTTCAATCTACAGGTATACCGATGCTACTAGGGATTTCTTGCTGCTAGCGTGA