Contig 004722:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B16Sequence588001598 (5)ref|XP_009626278.1|3e-46PREDICTED: long-chain-alcohol oxidase FAO4A [Nicotiana tomentosiformis]723004722 (6)ref|XP_004246021.1|8e-74PREDICTED: long-chain-alcohol oxidase FAO4A-like [Solanum lycopersicum]
JMFF029G05Sequence583001598 (5)ref|XP_009626278.1|3e-46PREDICTED: long-chain-alcohol oxidase FAO4A [Nicotiana tomentosiformis]724004722 (6)ref|XP_006368110.1|9e-98PREDICTED: long-chain-alcohol oxidase FAO4A-like, partial [Solanum tuberosum]
JMFF034K18Sequence543001598 (5)ref|XP_009626278.1|6e-51PREDICTED: long-chain-alcohol oxidase FAO4A [Nicotiana tomentosiformis]724004722 (6)ref|XP_006368110.1|5e-99PREDICTED: long-chain-alcohol oxidase FAO4A-like, partial [Solanum tuberosum]
JMFN028L15Sequence482004722 (6)ref|XP_011078909.1|4e-47PREDICTED: long-chain-alcohol oxidase FAO4A-like [Sesamum indicum]
JMSF048A14Sequence696001598 (5)gb|AGK82825.1|3e-66alcohol oxidase [Solanum pennellii]695004722 (6)ref|XP_006368110.1|1e-96PREDICTED: long-chain-alcohol oxidase FAO4A-like, partial [Solanum tuberosum]
JMSF050H17Sequence641001598 (5)gb|AGK82821.1|6e-82alcohol oxidase [Solanum pimpinellifolium]710004722 (6)ref|XP_006368110.1|1e-106PREDICTED: long-chain-alcohol oxidase FAO4A-like, partial [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF050H17+                                                                 CTACG
                      ____________________________________________________________
consensus                                                                    CTACG
 
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rJMSF050H17+          AAGGGGCGATAATGTCGGCGATGTCTACCGTCGTCTTAAACGTTAACGGAACAGGGTACG
rJMFF010B16+                                                             CAGGGTACG
rJMFF029G05+                                                  CGTTAACGGAACAGGGTACG
rJMSF048A14+                                                  CGTTAACGGAACAGGGTACG
rJMFF034K18+                                                  CGTTAACGGAACAGGGTACG
                      ____________________________________________________________
consensus             AAGGGGCGATAATGTCGGCGATGTCTACCGTCGTCTTAAACGTTAACGGAACAGGGTACG
 
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rJMSF050H17+          GCGCGGTGATACAGACGCCGGCGTTACACCCGGGTTTGTTCTCCGCCCTAATGCCATGGA
rJMFF010B16+          GCGCGGTGATACAGACGCCGGCGTTACACCCGGGTTTGTTCTCCGCCNTAATGCCATGGA
rJMFF029G05+          GCGCGGTGATACAGACGCCGGCGTTACACCCGGGTTTGTTCTCCGCCCTAATGCCATGGA
rJMSF048A14+          GCGCGGTGATACAGACGCCGGCGTTACACCCGGGTTTGTTCTCCGCCCTAATGCCATGGA
rJMFF034K18+          GCGCGGTGATACAGACGCCGGCGTTACACCCGGGTTTGTTCTCCGCCCTAATGCCATGGA
                      ____________________________________________________________
consensus             GCGCGGTGATACAGACGCCGGCGTTACACCCGGGTTTGTTCTCCGCCCTAATGCCATGGA
 
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rJMSF050H17+          ATTCCGGGCAAGAATTCAAGATGAGGATGAGTAGATACGCAAGAACCGCCCACATCTTCG
rJMFF010B16+          ATTCCGGGCAAGAATTCAAGATGAGGATGAGTAGATACGCAAGAACCGCCCACATCTTCG
rJMFF029G05+          ATTCCGGGCAAGAATTCAAGATGAGGATGAGTAGATACGCAAGAACCGCCCACATCTTCG
rJMSF048A14+          ATTCCGGGCAAGAATTCAAGATGAGGATGAGTAGATACGCAAGAACCGCCCACATCTTCG
rJMFF034K18+          ATTCCGGGCAAGAATTCAAGATGAGGATGAGTAGATACGCAAGAACCGCCCACATCTTCG
                      ____________________________________________________________
consensus             ATTCCGGGCAAGAATTCAAGATGAGGATGAGTAGATACGCAAGAACCGCCCACATCTTCG
 
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rJMSF050H17+          CGCTGGCGAGGGATAAGGGCTCAGGGGAGGCGTTCTCGCCGACCTCAG-TAACCTACGAC
rJMFF010B16+          CGCTGGCGAGGGATAAGGGCTCAGGGGAGGCGTTCTCGCCGACCTCAGTTAACCCTCGAC
rJMFF029G05+          CGCTGGCGAGGGATAAGGGCTCAGGGGAGGCGTTCTCGCCGACCTCAG-TAACCCTCGAC
rJMSF048A14+          NGCTGGCGAGGGATAAGGGCTCAGGGGAGGCGTTCTCGCCGACCTCAG-TAACCTACGAC
rJMFF034K18+          CGCTGGCGAGGGATAAGGGCTCAGGGGAGGCGTTCTCGCCGACCTCAG-TAACCTACGAC
                      ____________________________________________________________
consensus             CGCTGGCGAGGGATAAGGGCTCAGGGGAGGCGTTCTCGCCGACCTCAG-TAACCTACGAC
 
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rJMSF050H17+          CTTGACAAAACCGACGAGGAGAATCTCCAGAGAGGGCTCGAGAAGCTGTTGAGGATACTG
rJMFF010B16+          CTTGACAAAACCGACGAGGAGAATCTCCAGAGAGGGCTCGAGAAGCTGTTGAGGATACTG
rJMFF029G05+          CTTGACAAAACCGACGAGGAGAATCTCCAGAGAGGGCTCGAGAAGCTGTTGAGGATACTG
rJMSF048A14+          CTTGACAAAACCGACGAGGAGAATCTCCAGAGAGGGCTCGAGAAGCTGTTGAGGATACTG
rJMFF034K18+          CTTGACAAAACCGACGAGGAGAATCTCCAGAGAGGGCTCGAGAAGCTGTTGAGGATACTG
JMFN028L15-                                                                     TG
                      ____________________________________________________________
consensus             CTTGACAAAACCGACGAGGAGAATCTCCAGAGAGGGCTCGAGAAGCTGTTGAGGATACTG
 
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rJMSF050H17+          GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
rJMFF010B16+          GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
rJMFF029G05+          GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
rJMSF048A14+          GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
rJMFF034K18+          GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
JMFN028L15-           GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
                      ____________________________________________________________
consensus             GCGGCCGCCGGGGCCGAGGAGATTGGATGCAATCACGGCACAGGACTAACCCTCAAGGTG
 
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rJMSF050H17+          AAGGATGCGAGCAGGGAAGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
rJMFF010B16+          AAGGATGCGAGCAGGGAAGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
rJMFF029G05+          AAGGATGCGAGCAGGGAAGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
rJMSF048A14+          AAGGATGCGAGCAGGGANGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
rJMFF034K18+          AAGGATGCGAGCAGGGAAGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
JMFN028L15-           AAGGATGCGAGCAGGGAAGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
                      ____________________________________________________________
consensus             AAGGATGCGAGCAGGGAAGAGTTTGAGAGGTTTGTGAAGGAAGAGAGTTCACAGAGTCTA
 
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rJMSF050H17+          AGAAAACACCCGAATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
rJMFF010B16+          AGAAAACACCCGAATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
rJMFF029G05+          AGAAAACACCCGAATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
rJMSF048A14+          AGAAAACACCCGNATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
rJMFF034K18+          AGAAAACACCCGAATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
JMFN028L15-           AGAAAACACCCGAATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
                      ____________________________________________________________
consensus             AGAAAACACCCGAATCTGAAAGCTTCGGCGCACCAGATGGGGAGCTGCAGAATGGGAGTT
 
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rJMSF050H17+          GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
rJMFF010B16+          GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
rJMFF029G05+          GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
rJMSF048A14+          GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
rJMFF034K18+          GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
JMFN028L15-           GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
                      ____________________________________________________________
consensus             GATCCTAAGGCTTCAGTGGTGAACCCAAAGGGAGAGACATGGGAGGTGGAAGGGCTGTTT
 
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rJMSF050H17+          GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATG
rJMFF010B16+          GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATG
rJMFF029G05+          GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATG
rJMSF048A14+          GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATN
rJMFF034K18+          GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATG
JMFN028L15-           GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATG
                      ____________________________________________________________
consensus             GTTGGAGATGGGAGTGTTCTTCCTACGGCTTTAGGGGTGAACCCAATGGTCACCATTATG
 
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rJMSF050H17+          TCTGTTTCTTATTGCATTTCCCAGTCTGTACTTGAGTTTCTTAAGACTCATGATTAAACT
rJMFF010B16+          TCTGTTTCTTATTGCATTTCCCAGTCTGTACTTGAGTTTCTTAAGACTCATGATTAAACT
rJMFF029G05+          TCTGTTTCTTATTGCATTTCCCAGTCTGTACTTGAGTTTCTTAAGACTCATGATTAAACT
rJMSF048A14+          TCTGTTTCTTATTGCATTTCCCAGTCTNTACTTGAGTTTCTTAAGACTCATGATTAAACT
rJMFF034K18+          TCTGTTTCTTATTGCATTTCCCAGTCTGTACTTGAGTTTCTTAAGACTCATGATTAAACT
JMFN028L15-           TCTGTTTCTTATTGCATTTCCCAGTCTGTACTTGAGTTTCTTAAGACTCATGATTAAACT
                      ____________________________________________________________
consensus             TCTGTTTCTTATTGCATTTCCCAGTCTGTACTTGAGTTTCTTAAGACTCATGATTAAACT
 
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rJMSF050H17+          AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTGAATTTCGATC              
rJMFF010B16+          AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTGAATTTCGATCTGTGTGGATTGCTA
rJMFF029G05+          AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTGAATTTCGATCTGTGTGGATTGCTA
rJMSF048A14+          AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTNAATTTCGATCTGTGTGGATTGCTA
rJMFF034K18+          AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTGAATTTCGATCTGTGTGGATTGCTA
JMFN028L15-           AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTGAATTTCGATCTGTGTGGATTGCTA
                      ____________________________________________________________
consensus             AGCTAGCTTAATCATGCAATGGCTCATTGTCTTCTGAATTTCGATCTGTGTGGATTGCTA
 
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rJMFF010B16+          GCTGCAATAAAATATTTGTAATTTGTATT                               
rJMFF029G05+          GCTGCAATAAAATATTTGTAATTTGTATT                               
rJMSF048A14+          GCTGCAATAANATATT                                            
rJMFF034K18+          GCTGCAATAAAATATTTGTAATTTGTATT                               
JMFN028L15-           GCTGCAATAAAATATTTGTAATTTGTATTXXXXXXXXXXXXXXXXXXCTCGAACTAGTTC
                      ____________________________________________________________
consensus             GCTGCAATAAAATATTTGTAATTTGTATTNNNNNNNNNNNNNNNNNNCTCGAACTAGTTC