| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019A15 | Sequence | 583 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | 549 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] |
| JMFF042I14 | Sequence | 582 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | 582 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] |
| JMFF047C24 | Sequence | 440 | 004721 (10) | ref|XP_009762997.1| | 115 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | 375 | 023407 | |||
| JMFN014O09 | Sequence | 544 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | |||||
| JMFN016N01 | Sequence | 536 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | |||||
| JMFN017B07 | Sequence | 550 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | |||||
| JMFN020C03 | Sequence | 434 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | |||||
| JMFN028K24 | Sequence | 533 | 004721 (10) | ref|XP_009762997.1| | 146 | PREDICTED: uncharacterized protein LOC104214960 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF042I14+ GTAATGAAACCTT
JMFN017B07+ GTAATGAAACCTT
rJMFF042I14- GCAGTAATGAAACCTT
____________________________________________________________
consensus GCAGTAATGAAACCTT
. : . : . : . : . : . :
JMFF042I14+ GAAGTCACAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
JMFN017B07+ GAAGTCACAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
JMFN014O09+ CACAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
JMFN016N01+ CACAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
rJMFF042I14- GAAGTCACAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
JMFF019A15+ CAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
rJMFF019A15- ATTTGAGCACCATCTCTAAATGATGACAGGA
____________________________________________________________
consensus GAAGTCACAGGTAAAAACCATTATTAACAATTTGAGCACCATCTCTAAATGATGACAGGA
. : . : . : . : . : . :
JMFF042I14+ ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
JMFN017B07+ ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
JMFN014O09+ ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
JMFN016N01+ ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
rJMFF042I14- ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
JMFF019A15+ ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
rJMFF019A15- ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
JMFN028K24+ GCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
____________________________________________________________
consensus ACAAAGTGCACAATCAATCAATCATCACTGTCAGCGTGAATTTAACGAAAACATTCAACT
. : . : . : . : . : . :
JMFF042I14+ TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
JMFN017B07+ TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
JMFN014O09+ TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
JMFN016N01+ TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
JMFN020C03+ CTAAGCAGCAAAAGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
rJMFF042I14- TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
JMFF019A15+ TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
rJMFF019A15- TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
JMFN028K24+ TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
____________________________________________________________
consensus TCTAAGCAGCAAAGGGATTTCATTTCATCATTAAAACAAGGTAAATTACTCTAATAATAA
. : . : . : . : . : . :
JMFF042I14+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
JMFN017B07+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
JMFN014O09+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
JMFN016N01+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
JMFN020C03+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
rJMFF042I14- TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
JMFF019A15+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
rJMFF019A15- TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
JMFN028K24+ TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
____________________________________________________________
consensus TGGCTTTTGGTACACAATCAACTTTCAAGCCTTCACGCAGCAGTTGAAACATCTGAAGAT
. : . : . : . : . : . :
JMFF042I14+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFN017B07+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFN014O09+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFN016N01+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFN020C03+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
rJMFF042I14- GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFF019A15+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
rJMFF019A15- GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFF047C24+ GGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
JMFN028K24+ GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
____________________________________________________________
consensus GCTCCTCCTCGTAGTTGGAGACTGGTTTTGATTGTAATGGTGGTCGTCGCTGTGAGCCGA
. : . : . : . : . : . :
JMFF042I14+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
JMFN017B07+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
JMFN014O09+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
JMFN016N01+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
JMFN020C03+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
rJMFF042I14- GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
JMFF019A15+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
rJMFF019A15- GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
JMFF047C24+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGATCTTCCTCATTCCCGAGACT
JMFN028K24+ GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
____________________________________________________________
consensus GTGGCCTGCATTTGCACTGCCAGCGGTGGAAGACATAAGCTCTTCCTCATTCCCGAGACT
. : . : . : . : . : . :
JMFF042I14+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFN017B07+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFN014O09+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFN016N01+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFN020C03+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
rJMFF042I14- CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFF019A15+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
rJMFF019A15- CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFF047C24+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
JMFN028K24+ CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
____________________________________________________________
consensus CGCCCTCGACAAGTCCCTCTTGTTCTGTTTCCTCATCTCTCTGATTTTGGAGAAGTCCAA
. : . : . : . : . : . :
JMFF042I14+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFN017B07+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFN014O09+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFN016N01+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFN020C03+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
rJMFF042I14- TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFF019A15+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
rJMFF019A15- TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFF047C24+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
JMFN028K24+ TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
____________________________________________________________
consensus TGAATAATCTGGCAATGCTCCCTTTTGGTCCCAGTCCCCAAACTGTGGCACAGATAGCCA
. : . : . : . : . : . :
JMFF042I14+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
JMFN017B07+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAG
JMFN014O09+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
JMFN016N01+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
JMFN020C03+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
rJMFF042I14- TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
JMFF019A15+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
rJMFF019A15- TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
JMFF047C24+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
JMFN028K24+ TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
____________________________________________________________
consensus TGATGCATTCTTCTCCTTTTGGCCCTCCATCTGTGTGGTTTTCTATATGGGTACAAGAAA
. : . : . : . : . : . :
JMFF042I14+ AACAAACAAGTCGGACAATATCAATC
JMFN014O09+ AACAAACAA
JMFN016N01+ A
JMFN020C03+ AACAAACAAGTCGGA
rJMFF042I14- AACAAACAAGTCGGACAATATCAATC
JMFF019A15+ AACAAACAAGTCGGACAATATCAATCAAGAAATC
rJMFF019A15- AACAAACAAGTCGGACAATATCAATCAAGAAATC
JMFF047C24+ AACAAACAAGTCGGACAATATCAATCAAGAAATC
JMFN028K24+ AACAAACAAGTCGGACAATATCAATCAAGAAATCGGATAGATGAGAAAGATGTGTGTGCA
____________________________________________________________
consensus AACAAACAAGTCGGACAATATCAATCAAGAAATCGGATAGATGAGAAAGATGTGTGTGCA