Contig 004718:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF036F16-                             CCTTGCTGTACATACATGCATCACTTATTATTTTCTTAATT
                      ____________________________________________________________
consensus                                CCTTGCTGTACATACATGCATCACTTATTATTTTCTTAATT
 
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rJMFF036F16-          ATAGGGAATACATGCAAAGTACAAGTTTAAGTAGTACAGCATATTTAATTAATTCAAACT
                      ____________________________________________________________
consensus             ATAGGGAATACATGCAAAGTACAAGTTTAAGTAGTACAGCATATTTAATTAATTCAAACT
 
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rJMFF036F16-          TTGCTCTAGCCGAATATTGGGAGTATTCAATTCCCTTATTCAAAGCTCACTCACTCAATT
                      ____________________________________________________________
consensus             TTGCTCTAGCCGAATATTGGGAGTATTCAATTCCCTTATTCAAAGCTCACTCACTCAATT
 
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rJMFF036F16-          ACCATCTTTAATAGGGGAATTTGACATTATTCCCATTTGTACTGTCGCAAATCCNAAAGG
                      ____________________________________________________________
consensus             ACCATCTTTAATAGGGGAATTTGACATTATTCCCATTTGTACTGTCGCAAATCCNAAAGG
 
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rJMFF036F16-          AATGCCCAGGACATTTGATCTTCTTACCCTTGTTGCTAGCACNAAATGTAATGTAATCCA
JMFN009L11+                                                      AAATGTAATGTAATCCA
JMFN019G17+                                                      AAATGTAATGTAATCCA
                      ____________________________________________________________
consensus             AATGCCCAGGACATTTGATCTTCTTACCCTTGTTGCTAGCACNAAATGTAATGTAATCCA
 
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rJMFF036F16-          AAACAGCGTTCACTCCCTTTTCGTCTTCTCGACATGATACCGTTATTTCACCTAATCCAG
JMFN009L11+           AAACAGCGTTCACTCCCTNTTCGTCTTCTCGACATGATACCGTTATTTCACCTAATCCAG
JMFN019G17+           AAACAGCGTTCACTCCCTTTTCGTCTTCTCGACATGATACCGTTATTTCACCTAATCCAG
                      ____________________________________________________________
consensus             AAACAGCGTTCACTCCCTTTTCGTCTTCTCGACATGATACCGTTATTTCACCTAATCCAG
 
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rJMFF036F16-          CTTTTGCTATAGCTTTATTGATTGCATCTCCCGGGTAATATTTACCATTCGGTTTAATTC
JMFN009L11+           CTTTTGCTATAGCTTTATTGATTGCATCTCCCGGGTAATATTTACCATTCGGTTTAATTC
JMFN019G17+           CTTTTGCTATAGCTTTATTGATTGCATCTCCCGGGTAATATTTACCATTCGGTTTAATTC
                      ____________________________________________________________
consensus             CTTTTGCTATAGCTTTATTGATTGCATCTCCCGGGTAATATTTACCATTCGGTTTAATTC
 
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rJMFF036F16-          CTGCATCANCTAGAAGTTTGAGGAGATTAATTTGTTTGTAGACTCTGAGAGCAGCTGCAA
JMFN009L11+           CTGCATCAGCTAGAAGTTTGAGGAGATTAATTTGTTTGTAGACTCTGAGAGCAGCTGCAA
JMFN019G17+           CTGCATCAGCTAGAAGTTTGAGGAGATTAATTTGTTTGTAGACTCTGAGAGCAGCTGCAA
                      ____________________________________________________________
consensus             CTGCATCAGCTAGAAGTTTGAGGAGATTAATTTGTTTGTAGACTCTGAGAGCAGCTGCAA
 
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rJMFF036F16-          AGTAATCATGCTGATTGAATACTGTTTCAGCACAAGTACCGTACTCCACCCATTCTTCCT
JMFN009L11+           AGTAATCATGCTGATTGAATACTGTTTCAGCACAAGTACCGTACTCCACCCATTCTTCCT
JMFN019G17+           AGTAATCATGCTGATTGAATACTGTTTCAGCACAAGTACCGTACTCCACCCATTCTTCCT
                      ____________________________________________________________
consensus             AGTAATCATGCTGATTGAATACTGTTTCAGCACAAGTACCGTACTCCACCCATTCTTCCT
 
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rJMFF036F16-          TCCACAACTTCTTGCTATCTCTACTGGGACAACTCANTGAGGGNCAATACTTTTGCAAAC
JMFN009L11+           TCCACAACTTCTTGCTATCTCTACTGGGACAACTCAATGAGGGCCAATACTTTTGCAAAC
JMFN019G17+           TCCACAACTTCTTGCTATCTCTACTGGGACAACTCAATGAGGGCCAATACTTTTGCAAAC
                      ____________________________________________________________
consensus             TCCACAACTTCTTGCTATCTCTACTGGGACAACTCAATGAGGGCCAATACTTTTGCAAAC
 
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rJMFF036F16-          TCGGCACTAAATCTGCAATCTTTGACGGATGGAATTTGGTTCCGGTTGTGCAATTTGCGT
JMFN009L11+           TCGGCACTAAATCTGCAATCTTTGACGGTTGGAATTTGGTTCCGGTTGTGCAATTTGCGT
JMFN019G17+           TCGGCACTAAATCTGCAATCTTTGACGGTTGGAATTTGGTTCCGGTTGTGCAATTTGCGT
                      ____________________________________________________________
consensus             TCGGCACTAAATCTGCAATCTTTGACGGTTGGAATTTGGTTCCGGTTGTGCAATTTGCGT
 
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rJMFF036F16-          TTGTCCCTCCATTACTAGAGTAAAATGCTTGAA                           
JMFN009L11+           TTGTCCCTCCATTACTAGAGTAAAATGCTTGAAATTCATGAATGACAAAGTCATTCAAAG
JMFN019G17+           TTGTCCCTCCATTACTAGAGTAAAATGCTTGAAATTCATGAATGACAAAGTCATTCAAAG
                      ____________________________________________________________
consensus             TTGTCCCTCCATTACTAGAGTAAAATGCTTGAAATTCATGAATGACAAAGTCATTCAAAG
 
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JMFN009L11+           AAGGGCTTCCTTTCTTTGGGAGGCAACACCCTTCCTTGCTCTGACACTGGGTCTTTGGCC
JMFN019G17+           AAGGGCTTCCTTTCTTTGGGAGGCAACACCCTTCCTTGCTCTGACACTGGGTCTTTGGCC
                      ____________________________________________________________
consensus             AAGGGCTTCCTTTCTTTGGGAGGCAACACCCTTCCTTGCTCTGACACTGGGTCTTTGGCC
 
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JMFN009L11+           ATTTGAGACTGATGAAAAAGTAATCAGGTTTGATATCAGCGGTATAGGCTATAGTAGAAA
JMFN019G17+           ATTTGAGACTGATGAAAAAGTAATCAGGTTTGATATCAGCGGTATAGGCTATAGTAGAAA
                      ____________________________________________________________
consensus             ATTTGAGACTGATGAAAAAGTAATCAGGTTTGATATCAGCGGTATAGGCTATAGTAGAAA
 
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JMFN009L11+           GGGATGCCAAAGAGAGTGTAGTTAGAAGAAGAAAACAGTG                    
JMFN019G17+           GGGATGCCAAAGAGAGTGTAGTTAGAAGAAGAAAACAGTGAAAAGCTTCATGCTTCTTAG
                      ____________________________________________________________
consensus             GGGATGCCAAAGAGAGTGTAGTTAGAAGAAGAAAACAGTGAAAAGCTTCATGCTTCTTAG