Contig 004715:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016A17Sequence601004715 (3)ref|XP_009594778.1|127PREDICTED: uncharacterized protein LOC104091203 [Nicotiana tomentosiformis]
JMFN028P19Sequence522004715 (3)ref|XP_009594778.1|127PREDICTED: uncharacterized protein LOC104091203 [Nicotiana tomentosiformis]
JMFS071C09Sequence521004715 (3)ref|XP_009594778.1|124PREDICTED: uncharacterized protein LOC104091203 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN016A17+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMFN016A17+           TGTTTGGAGTACAATGAATGGAAATTGAAAGGATTAAGCAAAAACCCAAAGAAAAATGGX
                      ____________________________________________________________
consensus             TGTTTGGAGTACAATGAATGGAAATTGAAAGGATTAAGCAAAAACCCAAAGAAAAATGGN
 
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JMFN028P19+                             GCCTAATTTTTTTTCTTGATTTTACGTTTCTAGAAAACCAGT
JMFS071C09+                             GCCTAATTTTTTTTCTTGATTTTACGTTTCTAGAAAACCAGT
JMFN016A17+           XXXXXXXXXXXXXXXXXXGCCTAATTTTTTTTCTTGATTTTACGTTTCTAGAAAACCAGT
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNGCCTAATTTTTTTTCTTGATTTTACGTTTCTAGAAAACCAGT
 
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JMFN028P19+           CATCCTAAGAACAGAATTCCTAACTTGGCTCAAATCTCTGCCCTTGAGAGTCCGACCATT
JMFS071C09+           CATCCTAAGAACAGAATTCCTAACTTGGCTCAAATCTCTGCCCTTGAGAGTCCGACCATT
JMFN016A17+           CATCCTAAGAACAGAATTCCTAACTTGGCTCAAATCTCTGCCCTTGAGAGTCCGACCATT
                      ____________________________________________________________
consensus             CATCCTAAGAACAGAATTCCTAACTTGGCTCAAATCTCTGCCCTTGAGAGTCCGACCATT
 
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JMFN028P19+           TCCGGTGCAGACGGAAAACGCCATCATTTTCCCGGCGATTCTCCGGCCGGTGATCACGTG
JMFS071C09+           TCGGGTGCAGACGGAAAACGCCATCATTTTCCCGGCGATTCTCCGGCCGGTGATCACGTG
JMFN016A17+           TCCGGTGCAGACGGAAAACGCCATCATTTTCCCGGCGATTCTCCGGCCGGTGATCACGTG
                      ____________________________________________________________
consensus             TCCGGTGCAGACGGAAAACGCCATCATTTTCCCGGCGATTCTCCGGCCGGTGATCACGTG
 
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JMFN028P19+           CGGCGGCACCATTTCCCCGGCGGCGTCGTCCTCCACCGACCCACCCCCTTCCTTAGCGTC
JMFS071C09+           CGGCGGCACCATTTCCCCGGCGGCGTCGTCCTCCACCGACCCACCCCCTTCCTTAGCGTC
JMFN016A17+           CGGCGGCACCATTTCCCCGGCGGCGTCGTCCTCCACCGACCCACCCCCTTCCTTAGCGTC
                      ____________________________________________________________
consensus             CGGCGGCACCATTTCCCCGGCGGCGTCGTCCTCCACCGACCCACCCCCTTCCTTAGCGTC
 
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JMFN028P19+           CACGCAGCCGCCGACCCACGGCGCCGTTCTTGTAGGCCAGTTGCCGGGGATGTTCACCGG
JMFS071C09+           CACGCAGCCGCCGACCCACGGCGCCGTTCTTGTAGGCCAGTTGCCGGGGATGTTCACCGG
JMFN016A17+           CACGCAGCCGCCGACCCACGGCGCCGTTCTTGTAGGCCAGTTGCCGGGGATGTTCACCGG
                      ____________________________________________________________
consensus             CACGCAGCCGCCGACCCACGGCGCCGTTCTTGTAGGCCAGTTGCCGGGGATGTTCACCGG
 
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JMFN028P19+           CAGCGAAATCGACTCCCTCCTCGCCGCCGCGGCCGCCGTCACCGGCCTCCTCTGCTTCTT
JMFS071C09+           CAGCGAAATCGACTCCCTCCTCGCCGCCGCGGCCGCCGTCACCGGCCTCCTCTGCTTCTT
JMFN016A17+           CAGCGAAATCGACTCCCTCCTCGCCGCCGCGGCCGCCGTCACCGGCCTCCTCTGCTTCTT
                      ____________________________________________________________
consensus             CAGCGAAATCGACTCCCTCCTCGCCGCCGCGGCCGCCGTCACCGGCCTCCTCTGCTTCTT
 
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JMFN028P19+           GTTTCTCGATCCTCGAAGACGACCCGCCGAAGCGCGCGCGCTATACTCGTAATCATCATC
JMFS071C09+           GTTTCTCGATCCTCGAAGACGACCCGCCGAAGCGCGCGCGCTATACTCGTAATCATCATC
JMFN016A17+           GTTTCTCGATCCTCGAAGACGACCCGCCGAAGCGCGCGCGCTATACTCGTAATCATCATC
                      ____________________________________________________________
consensus             GTTTCTCGATCCTCGAAGACGACCCGCCGAAGCGCGCGCGCTATACTCGTAATCATCATC
 
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JMFN028P19+           GTCGTCCTCAACCCCCTCAAACCCAGCTGGGCTTTCTTGAAACACAACCTCGGATTCTTG
JMFS071C09+           GTCGTCCTCAACCCCCTCAAACCCAGCTGGGCTTTCTTGAAACACAACCTCGGATTCTTG
JMFN016A17+           GTCGTCCTCAACCCCCTCAAACCCAGCTGGGCTTTCTTGAAACACAACCTCGGATTCTTG
                      ____________________________________________________________
consensus             GTCGTCCTCAACCCCCTCAAACCCAGCTGGGCTTTCTTGAAACACAACCTCGGATTCTTG
 
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JMFN028P19+           GTACTCTTCTGCCATGTCTAGAAGAAACAACCTCGTTCAATCGGCACCCTTAAAT     
JMFS071C09+           GTACTCTTCTGCCATGTCTAGAAGAAACAACCTCGTTCAATCGGCACCCTTAAAT     
JMFN016A17+           GTACTCTTCTGCCATGTCTAGAAGAAACAACCTCGTTCAATCGGCACCCTTAAATAAATC
                      ____________________________________________________________
consensus             GTACTCTTCTGCCATGTCTAGAAGAAACAACCTCGTTCAATCGGCACCCTTAAATAAATC