Contig 004702:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009B19Sequence517004702 (2)ref|XP_006423551.1|4e-30hypothetical protein CICLE_v10029685mg [Citrus clementina] ref|XP_006494592.1| P
JMSF048H15Sequence307004702 (2)ref|XP_006423551.1|3e-21hypothetical protein CICLE_v10029685mg [Citrus clementina] ref|XP_006494592.1| P

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009B19- ACAAATATTAGTTTCTTCCTTCACAATTTGTATAGCC
                      ____________________________________________________________
consensus ACAAATATTAGTTTCTTCCTTCACAATTTGTATAGCC
 
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rJMSF048H15+ ATTTGAACATGGTAATTGGTATGG
JMFN009B19- TCTTTGATACATAGTGCCGCTACTTTCAAAAGAATTATTTGAACATGGCAATTAGTATGG
                      ____________________________________________________________
consensus TCTTTGATACATAGTGCCGCTACTTTCAAAAGAATTATTTGAACATGGTAATTGGTATGG
 
. : . : . : . : . : . :
rJMSF048H15+ GGCACATTCTCCGTGCTAAGCAAGGCCTCAGGAGATCTTCTTCAAGAACAAACAGAGAAA
JMFN009B19- CACGCATTCTACATGCTAAGCAAGGCCTTAGAAGGTCTTCTTCAAGAACAAACAGAGAAA
                      ____________________________________________________________
consensus GGCGCATTCTCCGTGCTAAGCAAGGCCTTAGGAGGTCTTCTTCAAGAACAAACAGAGAAA
 
. : . : . : . : . : . :
rJMSF048H15+ GTGAAGTGCCTAAGGGTCATTTTGCAGTTTATGTTGGGGAGAGTGAAAAGAGGCGTTTTG
JMFN009B19- GTGAGGTTCCAAAGGGGCACCTTGCAGTTTATGTTGGCGAGAGTGAAAAGAAGCGCTTTG
                      ____________________________________________________________
consensus GTGAGGTTCCTAAGGGTCATTTTGCAGTTTATGTTGGGGAGAGTGAAAAGAGGCGTTTTG
 
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rJMSF048H15+ TCATTCCAGTTGCGTACTTGAAGGACCCTTCGTTCCAAGACTTGCTTAGTCAAGCTGAAG
JMFN009B19- TTATTCCAATATCATACTTGGCGGCCCCTTCATTCCAAGACTTACTTAGTCAAGCTGAGG
                      ____________________________________________________________
consensus TTATTCCAGTTTCGTACTTGGCGGCCCCTTCGTTCCAAGACTTGCTTAGTCAAGCTGAGG
 
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rJMSF048H15+ AAGAATTCGGATTTGATCATCCAA
JMFN009B19- AAGAATTCGGATTTGATCATCCAATGGGCGGACTTACAATACCTTGTCCGGAGGAAACCT
                      ____________________________________________________________
consensus AAGAATTCGGATTTGATCATCCAATGGGCGGACTTACAATACCTTGTCCGGAGGAAACCT
 
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JMFN009B19- GCCTTCACATCATCTGTAGTTCAAGTAGATCCTGAGAGTCTACAAACAGCTTAGTTTAGT
                      ____________________________________________________________
consensus GCCTTCACATCATCTGTAGTTCAAGTAGATCCTGAGAGTCTACAAACAGCTTAGTTTAGT
 
. : . : . : . : . : . :
JMFN009B19- CAAGAAATTTTTTGCTTAGGAAGTATTCTTGTACAGTTCTCCACAATTTTCAGCTGTCCC
                      ____________________________________________________________
consensus CAAGAAATTTTTTGCTTAGGAAGTATTCTTGTACAGTTCTCCACAATTTTCAGCTGTCCC
 
. : . : . : . : . : . :
JMFN009B19- ATGATCAGCTCAGAATCTGTAAATTTCACTGATTATACATACGGAGGACTATTATTCACT
                      ____________________________________________________________
consensus ATGATCAGCTCAGAATCTGTAAATTTCACTGATTATACATACGGAGGACTATTATTCACT