Contig 004700:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007I11Sequence579004700 (4)ref|XP_009804993.1|7e-11PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest
JMFN015P24Sequence544004700 (4)ref|XP_009804993.1|5e-11PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest
JMSF038E14Sequence576004700 (4)ref|XP_009804993.1|8e-11PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest543004700 (4)ref|XP_009804993.1|7e-11PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvest

Alignment

This contig is upended


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JMSF038E14+                      TTTTTTTTTTATCAGAAATTCAACATCCATTAAAACTAAAAAGCTCAAT
JMFN007I11+                                ATCAGAAATTCAACATCCATTAAAACTAAAAAGCTCAAT
                      ____________________________________________________________
consensus                        TTTTTTTTTTATCAGAAATTCAACATCCATTAAAACTAAAAAGCTCAAT
 
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JMSF038E14+           TTATCAATGTAGCAGCATATCAATATCAATTTCAAACAGTATGATATATCAAAAATTCAA
JMFN015P24+                   GTAGCAGCATATCAATATCAATTTCAAACAGTATGATATATCAAAAATTCAA
rJMSF038E14-                  GTAGCAGCATATCAATATCAATTTCAAACAGTATGATATATCAAAAATTCAA
JMFN007I11+           TTATCAATGTAGCAGCATATCAATATCAATTTCAAACAGTATGATATATCAAAAATTCAA
                      ____________________________________________________________
consensus             TTATCAATGTAGCAGCATATCAATATCAATTTCAAACAGTATGATATATCAAAAATTCAA
 
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JMSF038E14+           CATCAATTAAAACTAAAAAGCTTAATTTATCAATGTAGCAGCATATCAACTTCAACAGAT
JMFN015P24+           CATCAATTAAAACTAAAAAGCTTAATTTATCAATGTAGCAGCATATCAACTTCAACAGAT
rJMSF038E14-          CATCAATTAAAACTAAAAAGCTTAATTTATCAATGTAGCAGCATATCAACTTCAACAGAT
JMFN007I11+           CATCAATTAAAACTAAAAAGCTTAATTTATCAATGTAGCAGCATATCAACTTCAACAGAT
                      ____________________________________________________________
consensus             CATCAATTAAAACTAAAAAGCTTAATTTATCAATGTAGCAGCATATCAACTTCAACAGAT
 
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JMSF038E14+           ATATCAGAAATTCAACATCCATTAAAACGAAACTCTCTCAAAAGCAGGATACTCTAAATT
JMFN015P24+           ATATCAGAAATTCAACATCCATTAAAACGAAACTCTCTCAAAAGCAGGATACTCTAAATT
rJMSF038E14-          ATATCAGAAATTCAACATCCATTAAAACGAAACTCTCTCAAAAGCAGGATACTCTAAATT
JMFN007I11+           ATATCAGAAATTCAACATCCATTAAAACGAAACTCTCTCAAAAGCAGGATACTCTAAATT
                      ____________________________________________________________
consensus             ATATCAGAAATTCAACATCCATTAAAACGAAACTCTCTCAAAAGCAGGATACTCTAAATT
 
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JMSF038E14+           CCAACAGGCCCCAAACCTAACGGTGAAAGACCCGATTACTTTGGTGGTGGACCAACGGAG
JMFN015P24+           CCAACAGGCCCCAAACCTAACGGTGAAAGACCCGATTACTTTGGTGGTGGACCAACGGAA
rJMSF038E14-          CCAACAGGCCCCAAACCTAACGGTGAAAGACCCGATTACTTTGGTGGTGGACCAACGGAG
JMFN007I11+           CCAACAGGCCCCAAACCTAACGGTGAAAGACCCGATTACTTTGGTGGTGGACCAACGGAG
                      ____________________________________________________________
consensus             CCAACAGGCCCCAAACCTAACGGTGAAAGACCCGATTACTTTGGTGGTGGACCAACGGAG
 
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JMSF038E14+           GGAGTACCGAGGAGGCTGGCCTGCTGGAGATCGAGTTCGTTGAGCTGCTGTTCACGGTCC
JMFN015P24+           GGAGTACCGAGGAGGCTGGCCTGCTGGAGATCGAGTTCGTTGAGCTGCTGTTCACGGTCC
rJMSF038E14-          GGAGTACCGAGGAGGCTGGCCTGCTGGAGATCGAGTTCGTTGAGCTGCTGTTCACGGTCC
JMFN007I11+           GGAGTACCGAGGAGGCTGGCCTGCTGGAGATCGAGTTCGTTGAGCTGCTGTTCACGGTCC
                      ____________________________________________________________
consensus             GGAGTACCGAGGAGGCTGGCCTGCTGGAGATCGAGTTCGTTGAGCTGCTGTTCACGGTCC
 
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JMSF038E14+           ATTACAATGATCAGTGGGACGGCGATGATGAGGAGAGTGGTGGCGGCGATCCACGCCGCC
JMFN015P24+           ATTACAATGATCAGTGGGACGGCGATGATGAGGAGAGTGGTGGCGGCGATCCACGCCGCC
rJMSF038E14-          ATTACAATGATCAGTGGGACGGCGATGATGAGGAGAGTGGTGGCGGCGATCCACGCCGCC
JMFN007I11+           ATTACAATGATCAGTGGGACGGCGATGATGAGGAGAGTGGTGGCGGCGATCCACGCCGCC
                      ____________________________________________________________
consensus             ATTACAATGATCAGTGGGACGGCGATGATGAGGAGAGTGGTGGCGGCGATCCACGCCGCC
 
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JMSF038E14+           TTGCCAGTGCTCTTGGCCAACCGCTTCCCCACGTAGGCGGCGTCACTGGCGGCGCTCTTG
JMFN015P24+           TTGCCAGTGCTCTTGGCCAACCGCTTCCCCACGTAGGCGGCGTCACTGGCGGCGCTCTTG
rJMSF038E14-          TTGCCAGTGCTCTTGGCCAACCGCTTCCCCACGTAGGCGGCGTCACTGGCGGCGCTCTTG
JMFN007I11+           TTGCCAGTGCTCTTGGCCAACCGCTTCCCCACGTAGGCGGCGTCACTGGCGGCGCTCTTG
                      ____________________________________________________________
consensus             TTGCCAGTGCTCTTGGCCAACCGCTTCCCCACGTAGGCGGCGTCACTGGCGGCGCTCTTG
 
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JMSF038E14+           CCTTTGCGGACTATTGAGGAGTCGGAGACGCGAGAAATAATGGAGCGGTCGCTGCTGCCG
JMFN015P24+           CCTTTGCGGACTATTGAGGAGTCGGAGACGCGAGAAATAATGGAGCGGTCGCTGCTGCCG
rJMSF038E14-          CCTTTGCGGACTATTGAGGAGTCGGAGACGCGAGAAATAATGGAGCGGTCGCTGCTGCCG
JMFN007I11+           CCTTTGCGGACTATTGAGGAGTCGGAGACGCGAGAAATAATGGAGCGGTCGCTGCTGCCG
                      ____________________________________________________________
consensus             CCTTTGCGGACTATTGAGGAGTCGGAGACGCGAGAAATAATGGAGCGGTCGCTGCTGCCG
 
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JMSF038E14+           CCGCTGGATTTGCCTTTAGATGCCATTGTAGACTTGTAGAGTGCGC              
JMFN015P24+           CCGCTGGATTTGCCTTTAGATGCCATTGTAGACTTGTAGAGTGCGCGATGGATGACA   
rJMSF038E14-          CCGCTGGATTTGCCTTTAGATGCCATTGTAGACTTGTAGAGTGCGC              
JMFN007I11+           CCGCTGGATTTGCCTTTAGATGCCATTGTAGACTTGTAGAGTGCGCGATGGATGACAGGA
                      ____________________________________________________________
consensus             CCGCTGGATTTGCCTTTAGATGCCATTGTAGACTTGTAGAGTGCGCGATGGATGACAGGA