Contig 004697:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006B09Sequence626004697 (3)ref|XP_009760941.1|6e-64PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Nicotiana sylvestr
JMSF044D19Sequence800004697 (3)ref|XP_009760941.1|9e-126PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Nicotiana sylvestr
JMSF050P24Sequence532001001 (6)ref|XP_004236757.1|3e-38PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum lycopersic690004697 (3)ref|XP_009760941.1|2e-80PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Nicotiana sylvestr

Alignment

This contig is upended


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rJMSF044D19+                         GAATGTAACTACTCCCGCAAATTACTTCCACGTACTCNGACGACA
                      ____________________________________________________________
consensus                            GAATGTAACTACTCCCGCAAATTACTTCCACGTACTCNGACGACA
 
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rJMSF044D19+          AATCCACAGGGATTTCCGTAAACCTCTGATCGTGATGGCGCCAAAGAGTTTGCTTCGGCA
                      ____________________________________________________________
consensus             AATCCACAGGGATTTCCGTAAACCTCTGATCGTGATGGCGCCAAAGAGTTTGCTTCGGCA
 
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rJMSF044D19+          TAAGGAATGCAAGTCAAACCTATCCGAGTTTGACGATGTCCAAGGCCACCCCGGTTTTGA
                      ____________________________________________________________
consensus             TAAGGAATGCAAGTCAAACCTATCCGAGTTTGACGATGTCCAAGGCCACCCCGGTTTTGA
 
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rJMSF044D19+          TAAACAAGGCACCAGGTTTAAGCGCCTCATAAAAGATCAGAATTNTCATTCGGATCGCGA
rJMSF050P24+                         GTTTAAGCGCCTCATAAAAGATCAGAATTTTCATTCGGATCGCGA
                      ____________________________________________________________
consensus             TAAACAAGGCACCAGGTTTAAGCGCCTCATAAAAGATCAGAATTTTCATTCGGATCGCGA
 
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rJMSF044D19+          AGAGGGTATTAGACGCTTGGTTCTTTGCTCAGGAAAGATCTATTACGAGCTCGATGAAGA
rJMSF050P24+          AGAGGGTATTAGACGCTTGGTTCTTTGCTCAGGAAAGATCTATTACGAGCTCGATGAAGA
JMFN006B09-                                             AAGATCTATTACGAGCTCGATGAAGA
                      ____________________________________________________________
consensus             AGAGGGTATTAGACGCTTGGTTCTTTGCTCAGGAAAGATCTATTACGAGCTCGATGAAGA
 
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rJMSF044D19+          GAGGAGAAGGGTCGATGGCAAGGATGTTGCTATCTGTAGGGTGGAACAGCTCTGTCCTTT
rJMSF050P24+          GAGGAGAAGGGTCGATGGCAAGGATGTTGCTATCTGTAGGGTGGAACAGCTCTGTCCTTT
JMFN006B09-           GAGGAGAAGGGTCGATGGCAAGGATGTTGCTATCTGTAGGGTGGAACAGCTCTGTCCTTT
                      ____________________________________________________________
consensus             GAGGAGAAGGGTCGATGGCAAGGATGTTGCTATCTGTAGGGTGGAACAGCTCTGTCCTTT
 
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rJMSF044D19+          CCCATACGACCTCGTCCAGCGTGAATTGAAACGCTATCCAAATGCGGAGGTTGTTTGGTG
rJMSF050P24+          CCCATACGACCTCGTCCAGCGTGAATTGAAACGCTATCCAAATGCGGAGGTTGTTTGGTG
JMFN006B09-           CCCATACGACCTCGTCCAGCGTGAATTGAAACGCTATCCAAATGCGGAGGTTGTTTGGTG
                      ____________________________________________________________
consensus             CCCATACGACCTCGTCCAGCGTGAATTGAAACGCTATCCAAATGCGGAGGTTGTTTGGTG
 
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rJMSF044D19+          CCAGGAAGAGCCCATGAACATGGGCGCATTCCATTACGTTGCACCACGCCTTTGTACTGC
rJMSF050P24+          CCAGGAAGAGCCCATGAACATGGGCGCATTCCATTACGTTGCACCACGCCTTTGTACTGC
JMFN006B09-           CCAGGAAGAGCCCATGAACATGGGCGCATTCCATTACGTTGCACCACGCCTTTGTACTGC
                      ____________________________________________________________
consensus             CCAGGAAGAGCCCATGAACATGGGCGCATTCCATTACGTTGCACCACGCCTTTGTACTGC
 
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rJMSF044D19+          AATGAAGGCAGTTGGGAGGGGCAATATGGACGACATCAAATATGTTGGCCGTCTCTCTTC
rJMSF050P24+          AATGAAGGCAGTTGGGAGGGGCAATATGGACGACATCAAATATGTTGGCCGTCTCTCTTC
JMFN006B09-           AATGAAGGCAGTTGGGAGGGGCAATATGGACGACATCAAATATGTTGGCCGTCTCTCTTC
                      ____________________________________________________________
consensus             AATGAAGGCAGTTGGGAGGGGCAATATGGACGACATCAAATATGTTGGCCGTCTCTCTTC
 
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rJMSF044D19+          AGCTTCAACTGCTACTGGTTTCCTACAGGTTCACATCAAAGAACAGGCCGGGCTCGTCCA
rJMSF050P24+          AGCTTCAACTGCTACTGGTTTCCTACAGGTTCACATCAAAGAACAGGCCGGGCTCGTCCA
JMFN006B09-           AGCTTCAACTGCTACTGGTTTCCTACAGGTTCACATCAAAGAACAGGCCGGGCTCGTCCA
                      ____________________________________________________________
consensus             AGCTTCAACTGCTACTGGTTTCCTACAGGTTCACATCAAAGAACAGGCCGGGCTCGTCCA
 
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rJMSF044D19+          GAAAGCCTTGCAGCCAAACCCAATTGACTTCCCGTGATGAACCCGATGCTCTGGCGATCG
rJMSF050P24+          GAAAGCCTTGCAGCCAAACCCAATTGACTTCCCGTGATGAACCCGATGCTCTGGCGATCG
JMFN006B09-           GAAAGCCTTGCAGCCAAACCCAATTGACTTCCCGTGATGAACCCGATGCTCTGGCGATCG
                      ____________________________________________________________
consensus             GAAAGCCTTGCAGCCAAACCCAATTGACTTCCCGTGATGAACCCGATGCTCTGGCGATCG
 
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rJMSF044D19+          CTCGAGGGGAGACTCGCAATAGACTTCTGTTGAAAGTTATCGTTTTTGCTCTCAGATGAT
rJMSF050P24+          CTCGAGGGGAGACTCGCAATAGACTTCTGTTGAAAGTTATCGTTTTTGCTCTCAGATGAT
JMFN006B09-           CTCGAGGGGAGACTCGCAATAGACTTCTGTTGAAAGTTATCGTTTTTGCTCTCAGATGAT
                      ____________________________________________________________
consensus             CTCGAGGGGAGACTCGCAATAGACTTCTGTTGAAAGTTATCGTTTTTGCTCTCAGATGAT
 
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rJMSF044D19+          ATTTTGTATGCATCATCTTGTCTTTGCAATTTTGA                         
rJMSF050P24+          ATTTTGTATGCATCATCTTGTCTTTGCAATTTTGACATGAGTCACACTCAGGTGTGATGT
JMFN006B09-           ATTTTGTATGCATCATCTTGTCTTTGCAATTTTGACATGAGTCACACTCAGGTGTGATGT
                      ____________________________________________________________
consensus             ATTTTGTATGCATCATCTTGTCTTTGCAATTTTGACATGAGTCACACTCAGGTGTGATGT
 
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rJMSF050P24+          CTCCTTCTCTGATGTTGGACCTGGTGATTTACTTGTTACAACTTACAACTGTATAAAATA
JMFN006B09-           CTCCTTCTCTGATGTTGGACCTGGTGATTTACTTGTTACAACTTACAACTGTATAAAATA
                      ____________________________________________________________
consensus             CTCCTTCTCTGATGTTGGACCTGGTGATTTACTTGTTACAACTTACAACTGTATAAAATA
 
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rJMSF050P24+          ATTAGGAATTTCTATAGCTATTGTGCTACACGAGGATGT                     
JMFN006B09-           ATTAGGAATTTCTATAGCTATTGTGCTACACGAGGATGTTAAAGCTAGTAGCATAAATCA
                      ____________________________________________________________
consensus             ATTAGGAATTTCTATAGCTATTGTGCTACACGAGGATGTTAAAGCTAGTAGCATAAATCA