Contig 004696:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+                          AAAGCAACCCCATCATAGTTTTTCATTAATATAATCAAATTACAC
JMFN031A05+                         GAAAGCAACCCCATCATAGTTTTTCATTAATATAATCAAATTACAC
JMFN006A06+                         GAAAGCAACCCCATCATAGTTTTTCATTAATATAATCAAATTACAC
                      ____________________________________________________________
consensus                           GAAAGCAACCCCATCATAGTTTTTCATTAATATAATCAAATTACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           ACGTACGTACGATTACATTTGTTTTCTTTTCCACAAAGTACAACAACACATGCATATATT
JMFN031A05+           ACGTACGTACGATTACATTTGTTTTCTTTTCCACAAAGTACAACAACACATGCATATATT
JMFN006A06+           ACGTACGTACGATTACATTTGTTTTCTTTTCCACAAAGTACAACAACACATGCATATATT
                      ____________________________________________________________
consensus             ACGTACGTACGATTACATTTGTTTTCTTTTCCACAAAGTACAACAACACATGCATATATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           AAATATAAATTGAGTACAGTACAGATAGATGGATGAAGTGGAAATAGTTTTAATATTTGA
JMFN031A05+           AAATATAAATTGAGTACAGTACAGATAGATGGATGAAGTGGAAATAGTTTTAATATTTGA
JMFN006A06+           AAATATAAATTGAGTACAGTACAGATAGATGGATGAAGTGGAAATAGTTTTAATATTTGA
                      ____________________________________________________________
consensus             AAATATAAATTGAGTACAGTACAGATAGATGGATGAAGTGGAAATAGTTTTAATATTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           TAATGATTAATAGTAAATCCTTCCGGCCTGTGAAGTAGTCTGCAAATTAAAGGGCTGCTT
JMFN031A05+           TAATGATTAATAGTAAATCCTTCCGGCCTGTGAAGTAGTCTGCAAATTAAAGGGCTGCTT
JMFN006A06+           TAATGATTAATAGTAAATCCTTCCGGCCTGTGAAGTAGTCTGCAAATTAAAGGGCTGCTT
                      ____________________________________________________________
consensus             TAATGATTAATAGTAAATCCTTCCGGCCTGTGAAGTAGTCTGCAAATTAAAGGGCTGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           ATTTATTTATATTATATATATTGCTTCTCTACTTCACTTTCGTGGCGGCGCTCAAGGGTG
JMFN031A05+           ATTTATTTATATTATATATATTGCTTCTCTACTTCACTTTCGTGGCGGCGCTCAAGGGTG
JMFN006A06+           ATTTATTTATATTATATATATTGCTTCTCTACTTCACTTTCGTGGCGGCGCTCAAGGGTG
                      ____________________________________________________________
consensus             ATTTATTTATATTATATATATTGCTTCTCTACTTCACTTTCGTGGCGGCGCTCAAGGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           TTGTCCAGATCAATGTGCATGTCCTACTCCTAGAAGAGTAGTTTTTTCTCCTTTTGGTGA
JMFN031A05+           TTGTCCAGATCAATGTGCATGTCCTACTCCTAGAAGAGTAGTTTTTTCTCCTTTTGGTGA
JMFN006A06+           TTGTCCAGATCAATGTGCATGTCCTACTCCTAGAAGAGTAGTTTTTTCTCCTTTTGGTGA
                      ____________________________________________________________
consensus             TTGTCCAGATCAATGTGCATGTCCTACTCCTAGAAGAGTAGTTTTTTCTCCTTTTGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           TCCATCATGGCCTGCCCCCTTGCTGGGTGGATGCGGAGTTGCAACTAGATCCTCATACCC
JMFN031A05+           TCCATCATGGCCTGCCCCCTTGCTGGGTGGATGCGGAGTTGCAACTAGATCCTCATACCC
JMFN006A06+           TCCATCATGGCCTGCCCCCTTGCTGGGTGGATGCGGAGTTGCAACTAGATCCTCATACCC
                      ____________________________________________________________
consensus             TCCATCATGGCCTGCCCCCTTGCTGGGTGGATGCGGAGTTGCAACTAGATCCTCATACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN040C16+           GCCCGCAAGTGAATTAGTGTTAATTACGGGGACCTTGGGGATGAAAC             
JMFN031A05+           GCCCGCAAGTGAATTAGTGTTAATTACGGGGACCTTGGGGATGAAAC             
JMFN006A06+           GCCCGCAAGTGAATTAGTGTTAATTACGGGGACCTTGGGGATGAAACTATCGGCAAAGAG
                      ____________________________________________________________
consensus             GCCCGCAAGTGAATTAGTGTTAATTACGGGGACCTTGGGGATGAAACTATCGGCAAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006A06+           GAGTCTCTTAGACGTGGCATTTGTAGTGGTGAAGCAGAGAGAGGCAGTGATGAGGAGAAA
                      ____________________________________________________________
consensus             GAGTCTCTTAGACGTGGCATTTGTAGTGGTGAAGCAGAGAGAGGCAGTGATGAGGAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006A06+           TGAGAAAATTAGAGAAAAGTTCTTGCTAACCATTGTTCTTTTGTATAGTTGAGGGAAGAA
                      ____________________________________________________________
consensus             TGAGAAAATTAGAGAAAAGTTCTTGCTAACCATTGTTCTTTTGTATAGTTGAGGGAAGAA