Contig 004695:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005I03Sequence491004695 (4)ref|XP_010253125.1|151PREDICTED: uncharacterized protein LOC104594518 [Nelumbo nucifera]
JMFN036L21Sequence625004695 (4)ref|XP_009597466.1|223PREDICTED: uncharacterized protein LOC104093429 [Nicotiana tomentosiformis]
JMSF019L10Sequence546004695 (4)ref|XP_009597466.1|182PREDICTED: uncharacterized protein LOC104093429 [Nicotiana tomentosiformis]749004695 (4)ref|XP_009597466.1|224PREDICTED: uncharacterized protein LOC104093429 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF019L10-            GAAAACTCTCCCTCATGAACGTCTCCTCACACCAATATATATAAGCAGCAAAAATGGCA
rJMSF019L10+                       TCATGAACGTCTCCTCACACCAATATATATAAGCAGCAAAAATGGCA
                      ____________________________________________________________
consensus              GAAAACTCTCCCTCATGAACGTCTCCTCACACCAATATATATAAGCAGCAAAAATGGCA
 
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JMSF019L10-           CCAAAGACTAACCTTGAAAACTATACAGAGCAAAAATGGGTCTCAGGGCTCTGACCTTGA
JMFN036L21-                                           AAAATGGGTCTCAGGGCTCTGACCTTGA
rJMSF019L10+          CCAAAGACTAACCTTGAAAACTATACAGAGCAAAAATGGGTCTCAGGGCTCTGACCTTGA
                      ____________________________________________________________
consensus             CCAAAGACTAACCTTGAAAACTATACAGAGCAAAAATGGGTCTCAGGGCTCTGACCTTGA
 
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JMSF019L10-           CGCCTCCACAGAGTGGCATTTTCACAAACACTGGGTGTGCACACAAGCTCTCAACTTGTA
JMFN036L21-           CGCCTCCACAGAGTGGCATTTTCACAAACACTGGGTGTGCACACAAGCTCTCAACTTGTA
rJMSF019L10+          CGCCTCCACAGAGTGGCATTTTCACAAACACTGGGTGTGCACACAAGCTCTCAACTTGTA
                      ____________________________________________________________
consensus             CGCCTCCACAGAGTGGCATTTTCACAAACACTGGGTGTGCACACAAGCTCTCAACTTGTA
 
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JMSF019L10-           GCGGCGTTCCCAGCAGAAGAAGCCTCAAGAAATCTTTCGTGGTTTCAGCCAAGAAAGAGA
JMFN036L21-           GCGGCGTTCCCAGCAGAAGAAGCCTCAAGAAATCTTTCGTGGTTTCAGCCAAGAAAGAGA
rJMSF019L10+          GCGGCGTTCCCAGCAGAAGAAGCCTCAAGAAATCTTTCGTGGTTTCAGCCAAGAAAGAGA
                      ____________________________________________________________
consensus             GCGGCGTTCCCAGCAGAAGAAGCCTCAAGAAATCTTTCGTGGTTTCAGCCAAGAAAGAGA
 
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JMSF019L10-           AGAGCGATGAAGAACCCGCGCAGAGGAAGCAATCTCTGTTCAGTAGTGTGACGGAAGCTC
JMFN036L21-           AGAGCGATGAAGAACCCGCGCAGAGGAAGCAATCTCTGTTCAGTAGTGTGACGGAAGCTC
rJMSF019L10+          AGAGCGATGAAGAACCCGCGCAGAGGAAGCAATCTCTGTTCAGTAGTGTGACGGAAGCTC
                      ____________________________________________________________
consensus             AGAGCGATGAAGAACCCGCGCAGAGGAAGCAATCTCTGTTCAGTAGTGTGACGGAAGCTC
 
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JMSF019L10-           TCGATTTTTCCCAGGTTAGATCCGCCAAAGATGCCGAGCTTCTTGAAGATGCTAGGGAAG
JMFN036L21-           TCGATTTTTCCCAGGTTAGATCCGCCAAAGATGCCGAGCTTCTTGAAGATGCTAGGGAAG
rJMSF019L10+          TCGATTTTTCCCAGGTTAGATCCGCCAAAGATGCCGAGCTTCTTGAAGATGCTAGGGAAG
JMFN005I03+                                                            TGCTAGGGAAG
                      ____________________________________________________________
consensus             TCGATTTTTCCCAGGTTAGATCCGCCAAAGATGCCGAGCTTCTTGAAGATGCTAGGGAAG
 
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JMSF019L10-           CAACTCAATCCGGAGGGAGAATGTCCAGAGAACAGTATGGAGCTCTCAGAAGAAAGATTG
JMFN036L21-           CAACTCAATCCGGAGGGAGAATTTCCAGAGAACAGTATGGAGCTCTCAGAAGAAAGATTG
rJMSF019L10+          CAACTCAATCCGGAGGGAGAATGTCCAGAGAACAGTATGGAGCTCTCAGAAGAAAGATTG
JMFN005I03+           CAACTCAATCCGGAGGGAGAATGTCCAGAGAACAGTATGGAGCTCTCAGAAGAAAGATTG
                      ____________________________________________________________
consensus             CAACTCAATCCGGAGGGAGAATGTCCAGAGAACAGTATGGAGCTCTCAGAAGAAAGATTG
 
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JMSF019L10-           GAGGAACATACAAGGATTTCTTCAAGTCTTATGTTGAGGTGGATGGGCAGTATGTGGAAG
JMFN036L21-           GAGGAACATACAAGGATTTCTTCAAGTCTTATGTTGAGGTGGATGGGCAGTATGTGGAAG
rJMSF019L10+          GAGGAACATACAAGGATTTCTTCAAGTCTTATGTTGAGGTGGATGGGCAGTATGTGGAAG
JMFN005I03+           GAGGAACATACAAGGATTTCTTCAAGTCTTATGTTGAGGTGGATGGGCAGTATGTGGAAG
                      ____________________________________________________________
consensus             GAGGAACATACAAGGATTTCTTCAAGTCTTATGTTGAGGTGGATGGGCAGTATGTGGAAG
 
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JMSF019L10-           AGGGATGGGTTGACAAGACATGCAAAATCTGCAAGAAGGACACAAAGGGAGAAGCAAGGC
JMFN036L21-           AGGGATGGGTTGACAAGACATGCAAAATCTGCAAGAAGGACACAAAGGGAGAAGCAAGGC
rJMSF019L10+          AGGGATGGGTTGACAAGACATGCAAAATCTGCAAGAAGGACACAAAGGGAGAAGCAAGGC
JMFN005I03+           AGGGATGGGTTGACAAGACATGCAAAATCTGCAAGAAGGACACAAAGGGAGAAGCAAGGC
                      ____________________________________________________________
consensus             AGGGATGGGTTGACAAGACATGCAAAATCTGCAAGAAGGACACAAAGGGAGAAGCAAGGC
 
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JMSF019L10-           AAGTAGA                                                     
JMFN036L21-           AAGTAGACAAGCTTGGAAGATATGCCCATGTTGCATGCCTGGAGAAGAAAGCCACTTCTG
rJMSF019L10+          AAGTAGACAAGCTTGGAAGATATGCCCATGTTGCATGCCTGGAGAAGAAAGCCACTTCTG
JMFN005I03+           AAGTAGACAAGCTTGGAAGATATGCCCATGTTGCATGCCTGGAGAAGAAAGCCACTTCTG
                      ____________________________________________________________
consensus             AAGTAGACAAGCTTGGAAGATATGCCCATGTTGCATGCCTGGAGAAGAAAGCCACTTCTG
 
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JMFN036L21-           GCAACTTCTTTACCAAACTCTTCTCATGAATCATCATCAAGAACACCACTCTGAAAACAT
rJMSF019L10+          GCAACTTCTTTACCAAACTCTTCTCATGAATCATCATCAAGAACACCACTCTGAAAACAT
JMFN005I03+           GCAACTTCTTTACCAAACTCTTCTCATGAATCATCATCAAGAACACCACTCTGAAAACAT
                      ____________________________________________________________
consensus             GCAACTTCTTTACCAAACTCTTCTCATGAATCATCATCAAGAACACCACTCTGAAAACAT
 
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JMFN036L21-           GAAAATTTTTGTTTCTCTTTTGTTAGTTTGTGCTACATATNCATTCAGGTATATATG   
rJMSF019L10+          GAAAATTTTTGTTTCTCTTTTGTTAGTTTGTGCTACATATCAATTCAGGTATATATGTTT
JMFN005I03+           GAAAATTTTTGTTTCTCTTTTGTTAGTTTGTGCTACATATCAATTCAGGTATATATGTTT
                      ____________________________________________________________
consensus             GAAAATTTTTGTTTCTCTTTTGTTAGTTTGTGCTACATATCAATTCAGGTATATATGTTT
 
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rJMSF019L10+          GCTTGTCAATCGACACAATGCAATACAAAGGCTTGTAGAACA                  
JMFN005I03+           GCTTGTCAATCGACACAATGCAATACAAAGGCTTGTAGAACATTTTAGTATTATACCATT
                      ____________________________________________________________
consensus             GCTTGTCAATCGACACAATGCAATACAAAGGCTTGTAGAACATTTTAGTATTATACCATT
 
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JMFN005I03+           CAATACCTTTTATGTTGTATCXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTCTC
                      ____________________________________________________________
consensus             CAATACCTTTTATGTTGTATCNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTCTC