Contig 004681:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051H14Sequence510004681 (2)ref|XP_009759766.1|251PREDICTED: uncharacterized protein LOC104212247 [Nicotiana sylvestris]451004681 (2)ref|XP_004137699.1|4e-27PREDICTED: UPF0098 protein MTH_273-like [Cucumis sativus] ref|XP_004156621.1| PR

Alignment

This contig is upended


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rJMFF051H14-                       GGGGAAAAAATGGGAATGTTATCATAATTTCTAGAACAGACTCCCAT
                      ____________________________________________________________
consensus                          GGGGAAAAAATGGGAATGTTATCATAATTTCTAGAACAGACTCCCAT
 
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rJMFF051H14-          CCAACACGTTATTGAAAGTCACCAACACCACTCAAACATATATCATACAAAACTAGAAAG
                      ____________________________________________________________
consensus             CCAACACGTTATTGAAAGTCACCAACACCACTCAAACATATATCATACAAAACTAGAAAG
 
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rJMFF051H14-          TTAAACAAGAAAACATTATAGTCCCTTTGTGTTTATCATATCGCACTTTAATTTCACATT
                      ____________________________________________________________
consensus             TTAAACAAGAAAACATTATAGTCCCTTTGTGTTTATCATATCGCACTTTAATTTCACATT
 
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rJMFF051H14-          CTTAAAGAAATAAAGAAAAGCGAAAAAGTAAAACAGTGGTAATTTGAACCCATTAAAAAG
                      ____________________________________________________________
consensus             CTTAAAGAAATAAAGAAAAGCGAAAAAGTAAAACAGTGGTAATTTGAACCCATTAAAAAG
 
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rJMFF051H14-          TAGAAGCATTTTAGAATTCAGCAATCAAATCCGCTTCTGCAAGCGTATGCCCCTCCACCG
                      ____________________________________________________________
consensus             TAGAAGCATTTTAGAATTCAGCAATCAAATCCGCTTCTGCAAGCGTATGCCCCTCCACCG
 
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rJMFF051H14-          CCTCTAAAAGCTTGTCCTTTGTCGGCTTATTACCAAGATTGAGCACATCATCAAGGGCAA
JMFF051H14+                                         TACCAAGATTGAGCACATCATCAAGGGCAA
                      ____________________________________________________________
consensus             CCTCTAAAAGCTTGTCCTTTGTCGGCTTATTACCAAGATTGAGCACATCATCAAGGGCAA
 
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rJMFF051H14-          AAAGCCGAAACTCGATCCGATGTCCATGCGTAGGCAACTTAGGCACGCGCCACCCGGGGA
JMFF051H14+           AAAGCCGAAACTCGATCCGATGTCCATGCGTAGGCAACTTAGGCACGCGCCACCCGGGGA
                      ____________________________________________________________
consensus             AAAGCCGAAACTCGATCCGATGTCCATGCGTAGGCAACTTAGGCACGCGCCACCCGGGGA
 
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rJMFF051H14-          CCTTCTCGTCGTTCTGCCCTTTCTTAATCTCAGCATACTCGCCG                
JMFF051H14+           CCTTCTCGTCGTTCTGCCCTTCCTTAATCTCAGCATACTCGCCGCCCAACTCCTCGCCTT
                      ____________________________________________________________
consensus             CCTTCTCGTCGTTCTGCCCTTTCTTAATCTCAGCATACTCGCCGCCCAACTCCTCGCCTT
 
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JMFF051H14+           TGCCGGAAAACCCCTCCGGCAACCCCTTCAGCGTCGGGGGAATATTCGTCACCACCCAAA
                      ____________________________________________________________
consensus             TGCCGGAAAACCCCTCCGGCAACCCCTTCAGCGTCGGGGGAATATTCGTCACCACCCAAA
 
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JMFF051H14+           CCACCCACGGCACAATGGGTGAGCCGGGATCGGGCGCATCAATGTCCTGCACCACTAACG
                      ____________________________________________________________
consensus             CCACCCACGGCACAATGGGTGAGCCGGGATCGGGCGCATCAATGTCCTGCACCACTAACG
 
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JMFF051H14+           CCAAGCTCTTCGTTCCCTCCGGCAAATTGTACCATTCCAAAGGCGGCGACAATTTCATCT
                      ____________________________________________________________
consensus             CCAAGCTCTTCGTTCCCTCCGGCAAATTGTACCATTCCAAAGGCGGCGACAATTTCATCT
 
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JMFF051H14+           TCGCACCTTGACCTTCATCCGTGTATTTTCTAGGTAACCTGCCTTCGTGGCTGATGCTCG
                      ____________________________________________________________
consensus             TCGCACCTTGACCTTCATCCGTGTATTTTCTAGGTAACCTGCCTTCGTGGCTGATGCTCG
 
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JMFF051H14+           GCGACACCAGCCTGAACTCGTCACTTGCGGTAGCCGCCATTGTTGATCAACTCTGGTCTC
                      ____________________________________________________________
consensus             GCGACACCAGCCTGAACTCGTCACTTGCGGTAGCCGCCATTGTTGATCAACTCTGGTCTC
 
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JMFF051H14+           GGGGTTTTGCCGTCCAACTGTTCGATGAAATACCTGAGTGAGATTTGCGATGTTTTGGAT
                      ____________________________________________________________
consensus             GGGGTTTTGCCGTCCAACTGTTCGATGAAATACCTGAGTGAGATTTGCGATGTTTTGGAT